RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 CTTNBP2Q8WZ74 1663 aa10.99□□□□□ -0.65
SYCP3-204ENST00000478139 CLASP1Q7Z460 1538 aa10.99□□□□□ -0.65
SYCP3-204ENST00000478139 AFAP1Q8N556 730 aa10.99□□□□□ -0.65
SYCP3-204ENST00000478139 EPRSP07814 1512 aaKnown RBP10.98□□□□□ -0.65
SYCP3-204ENST00000478139 ATP10BO94823 1461 aa10.98□□□□□ -0.65
SYCP3-204ENST00000478139 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
SYCP3-204ENST00000478139 ARHGAP5Q13017 1502 aa10.98□□□□□ -0.65
SYCP3-204ENST00000478139 WDR7Q9Y4E6 1490 aa10.98□□□□□ -0.65
SYCP3-204ENST00000478139 CDK13Q14004 1512 aaKnown RBP10.98□□□□□ -0.65
SYCP3-204ENST00000478139 ERCC6L2Q5T890 1561 aa10.97□□□□□ -0.65
SYCP3-204ENST00000478139 KANK1Q14678 1352 aa10.96□□□□□ -0.65
SYCP3-204ENST00000478139 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.65
SYCP3-204ENST00000478139 SCAPERQ9BY12 1400 aa10.96□□□□□ -0.66
SYCP3-204ENST00000478139 RAPGEF6Q8TEU7 1601 aa10.93□□□□□ -0.66
SYCP3-204ENST00000478139 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
SYCP3-204ENST00000478139 PPP1R15AO75807 674 aaPredicted RBP10.93□□□□□ -0.66
SYCP3-204ENST00000478139 ZNF644Q9H582 1327 aaPredicted RBP10.93□□□□□ -0.66
SYCP3-204ENST00000478139 ANKRD30AQ9BXX3 1397 aa10.93□□□□□ -0.66
SYCP3-204ENST00000478139 NUP153P49790 1475 aaKnown RBP10.92□□□□□ -0.66
SYCP3-204ENST00000478139 SLC4A1APQ9BWU0 796 aaKnown RBP10.91□□□□□ -0.66
SYCP3-204ENST00000478139 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
SYCP3-204ENST00000478139 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
SYCP3-204ENST00000478139 UHRF1BP1LA0JNW5 1464 aa10.9□□□□□ -0.66
SYCP3-204ENST00000478139 ZNF326Q5BKZ1 582 aaKnown RBP10.9□□□□□ -0.66
SYCP3-204ENST00000478139 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
SYCP3-204ENST00000478139 FANCAO15360 1455 aa10.89□□□□□ -0.67
SYCP3-204ENST00000478139 PLEKHH2Q8IVE3 1493 aa10.89□□□□□ -0.67
SYCP3-204ENST00000478139 ADGRL1O94910 1474 aa10.89□□□□□ -0.67
SYCP3-204ENST00000478139 NCOA2Q15596 1464 aa10.88□□□□□ -0.67
SYCP3-204ENST00000478139 LRRC9Q6ZRR7 1453 aa10.88□□□□□ -0.67
SYCP3-204ENST00000478139 MYOM3Q5VTT5 1437 aa10.87□□□□□ -0.67
SYCP3-204ENST00000478139 AKNAQ7Z591 1439 aa10.87□□□□□ -0.67
SYCP3-204ENST00000478139 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
SYCP3-204ENST00000478139 KDM5BQ9UGL1 1544 aa10.87□□□□□ -0.67
SYCP3-204ENST00000478139 KIF14Q15058 1648 aa10.86□□□□□ -0.67
SYCP3-204ENST00000478139 EHBP1L1Q8N3D4 1523 aa10.86□□□□□ -0.67
SYCP3-204ENST00000478139 SENP3Q9H4L4 574 aaPredicted RBP10.86□□□□□ -0.67
SYCP3-204ENST00000478139 ABCC10Q5T3U5 1492 aa10.85□□□□□ -0.67
SYCP3-204ENST00000478139 HDGFP51858 240 aaKnown RBP10.85□□□□□ -0.67
SYCP3-204ENST00000478139 PLCH2O75038 1416 aa10.84□□□□□ -0.67
SYCP3-204ENST00000478139 DHX57Q6P158 1386 aaKnown RBP10.82□□□□□ -0.68
SYCP3-204ENST00000478139 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
SYCP3-204ENST00000478139 C14orf37Q86TY3 774 aa10.82□□□□□ -0.68
SYCP3-204ENST00000478139 ABCA8O94911 1581 aa10.82□□□□□ -0.68
SYCP3-204ENST00000478139 FGD6Q6ZV73 1430 aa10.81□□□□□ -0.68
SYCP3-204ENST00000478139 AMER1Q5JTC6 1135 aaPredicted RBP10.81□□□□□ -0.68
SYCP3-204ENST00000478139 NUP155O75694 1391 aa10.81□□□□□ -0.68
SYCP3-204ENST00000478139 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
SYCP3-204ENST00000478139 KIF15Q9NS87 1388 aa10.8□□□□□ -0.68
SYCP3-204ENST00000478139 TIAM1Q13009 1591 aa10.79□□□□□ -0.68
SYCP3-204ENST00000478139 RGL3Q3MIN7 710 aa10.79□□□□□ -0.68
SYCP3-204ENST00000478139 MIA2Q96PC5 1412 aa10.79□□□□□ -0.68
SYCP3-204ENST00000478139 EID1Q9Y6B2 187 aa10.79□□□□□ -0.68
SYCP3-204ENST00000478139 KCNA4P22459 653 aa10.79□□□□□ -0.68
SYCP3-204ENST00000478139 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
SYCP3-204ENST00000478139 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
SYCP3-204ENST00000478139 SUPT6HQ7KZ85 1726 aaKnown RBP10.77□□□□□ -0.69
SYCP3-204ENST00000478139 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.69
SYCP3-204ENST00000478139 POLR3GLQ9BT43 218 aa10.77□□□□□ -0.69
SYCP3-204ENST00000478139 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
SYCP3-204ENST00000478139 NEO1Q92859 1461 aa10.76□□□□□ -0.69
SYCP3-204ENST00000478139 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
SYCP3-204ENST00000478139 PKD2Q13563 968 aa10.75□□□□□ -0.69
SYCP3-204ENST00000478139 GPATCH8Q9UKJ3 1502 aaKnown RBP10.75□□□□□ -0.69
SYCP3-204ENST00000478139 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
SYCP3-204ENST00000478139 ZNF518AQ6AHZ1 1483 aa10.75□□□□□ -0.69
SYCP3-204ENST00000478139 CLSPNQ9HAW4 1339 aa10.74□□□□□ -0.69
SYCP3-204ENST00000478139 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
SYCP3-204ENST00000478139 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
SYCP3-204ENST00000478139 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
SYCP3-204ENST00000478139 CEBPAP49715 358 aaPredicted RBP10.72□□□□□ -0.69
SYCP3-204ENST00000478139 MAP3K1Q13233 1512 aa10.71□□□□□ -0.69
SYCP3-204ENST00000478139 KDM6BO15054 1643 aa10.71□□□□□ -0.69
SYCP3-204ENST00000478139 ANKRD50Q9ULJ7 1429 aa10.71□□□□□ -0.7
SYCP3-204ENST00000478139 ARXQ96QS3 562 aa10.71□□□□□ -0.7
SYCP3-204ENST00000478139 CAMSAP2Q08AD1 1489 aa10.7□□□□□ -0.7
SYCP3-204ENST00000478139 TRAPPC8Q9Y2L5 1435 aa10.7□□□□□ -0.7
SYCP3-204ENST00000478139 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
SYCP3-204ENST00000478139 RRBP1Q9P2E9 1410 aaKnown RBP10.69□□□□□ -0.7
SYCP3-204ENST00000478139 KIAA1107Q9UPP5 1409 aa10.69□□□□□ -0.7
SYCP3-204ENST00000478139 THEMISQ8N1K5 641 aaPredicted RBP10.69□□□□□ -0.7
SYCP3-204ENST00000478139 TONSLQ96HA7 1378 aa10.69□□□□□ -0.7
SYCP3-204ENST00000478139 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
SYCP3-204ENST00000478139 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
SYCP3-204ENST00000478139 MPHOSPH9Q99550 1183 aa10.67□□□□□ -0.7
SYCP3-204ENST00000478139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYCP3-204ENST00000478139 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
SYCP3-204ENST00000478139 DAPK1P53355 1430 aa10.66□□□□□ -0.7
SYCP3-204ENST00000478139 FOXD1Q16676 465 aa10.66□□□□□ -0.7
SYCP3-204ENST00000478139 SYCP2Q9BX26 1530 aa10.66□□□□□ -0.7
SYCP3-204ENST00000478139 ATP10AO60312 1499 aa10.66□□□□□ -0.7
SYCP3-204ENST00000478139 A2MP01023 1474 aa10.65□□□□□ -0.7
SYCP3-204ENST00000478139 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
SYCP3-204ENST00000478139 ANKLE2Q86XL3 938 aa10.64□□□□□ -0.71
SYCP3-204ENST00000478139 CFAP74Q9C0B2 1584 aa10.64□□□□□ -0.71
SYCP3-204ENST00000478139 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
SYCP3-204ENST00000478139 TXNDC2Q86VQ3 553 aa10.63□□□□□ -0.71
SYCP3-204ENST00000478139 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
SYCP3-204ENST00000478139 DIP2BQ9P265 1576 aa10.63□□□□□ -0.71
SYCP3-204ENST00000478139 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms