RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
TRIM13-208ENST00000478111 MAGI2Q86UL8 1455 aa27.55■■■□□ 2
TRIM13-208ENST00000478111 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
TRIM13-208ENST00000478111 POGZQ7Z3K3 1410 aa27.53■■■□□ 2
TRIM13-208ENST00000478111 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
TRIM13-208ENST00000478111 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
TRIM13-208ENST00000478111 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
TRIM13-208ENST00000478111 PCF11O94913 1555 aaKnown RBP27.44■■□□□ 1.98
TRIM13-208ENST00000478111 LMTK3Q96Q04 1460 aa27.44■■□□□ 1.98
TRIM13-208ENST00000478111 CASKIN1Q8WXD9 1431 aa27.42■■□□□ 1.98
TRIM13-208ENST00000478111 CDC42BPBQ9Y5S2 1711 aa27.42■■□□□ 1.98
TRIM13-208ENST00000478111 CLIP1P30622 1438 aa27.41■■□□□ 1.98
TRIM13-208ENST00000478111 ARHGAP5Q13017 1502 aa27.41■■□□□ 1.98
TRIM13-208ENST00000478111 ATP10AO60312 1499 aa27.4■■□□□ 1.98
TRIM13-208ENST00000478111 FER1L4A9Z1Z3 1794 aa27.38■■□□□ 1.97
TRIM13-208ENST00000478111 KDM5CP41229 1560 aa27.37■■□□□ 1.97
TRIM13-208ENST00000478111 MLECQ14165 292 aa27.37■■□□□ 1.97
TRIM13-208ENST00000478111 CCDC18Q5T9S5 1454 aa27.37■■□□□ 1.97
TRIM13-208ENST00000478111 ZNF518AQ6AHZ1 1483 aa27.37■■□□□ 1.97
TRIM13-208ENST00000478111 C9orf84Q5VXU9 1444 aa27.35■■□□□ 1.97
TRIM13-208ENST00000478111 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
TRIM13-208ENST00000478111 ARHGEF12Q9NZN5 1544 aa27.34■■□□□ 1.97
TRIM13-208ENST00000478111 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
TRIM13-208ENST00000478111 PLPPR3Q6T4P5 718 aa27.31■■□□□ 1.96
TRIM13-208ENST00000478111 FYCO1Q9BQS8 1478 aa27.29■■□□□ 1.96
TRIM13-208ENST00000478111 CDC42BPAQ5VT25 1732 aa27.29■■□□□ 1.96
TRIM13-208ENST00000478111 DIP2CQ9Y2E4 1556 aa27.27■■□□□ 1.96
TRIM13-208ENST00000478111 HSPA2P54652 639 aa27.27■■□□□ 1.96
TRIM13-208ENST00000478111 ABCC1P33527 1531 aa27.26■■□□□ 1.96
TRIM13-208ENST00000478111 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
TRIM13-208ENST00000478111 TRAPPC8Q9Y2L5 1435 aa27.25■■□□□ 1.95
TRIM13-208ENST00000478111 ITSN2Q9NZM3 1697 aa27.25■■□□□ 1.95
TRIM13-208ENST00000478111 ABCA6Q8N139 1617 aa27.24■■□□□ 1.95
TRIM13-208ENST00000478111 REREQ9P2R6 1566 aa27.24■■□□□ 1.95
TRIM13-208ENST00000478111 FBXO41Q8TF61 875 aa27.2■■□□□ 1.94
TRIM13-208ENST00000478111 KIDINS220Q9ULH0 1771 aa27.19■■□□□ 1.94
TRIM13-208ENST00000478111 CEBPAP49715 358 aaPredicted RBP27.18■■□□□ 1.94
TRIM13-208ENST00000478111 MYT1LQ9UL68 1186 aa27.18■■□□□ 1.94
TRIM13-208ENST00000478111 PREX1Q8TCU6 1659 aa27.16■■□□□ 1.94
TRIM13-208ENST00000478111 AGLP35573 1532 aa27.15■■□□□ 1.94
TRIM13-208ENST00000478111 GPATCH8Q9UKJ3 1502 aaKnown RBP27.15■■□□□ 1.94
TRIM13-208ENST00000478111 SAMD9LQ8IVG5 1584 aa27.14■■□□□ 1.94
TRIM13-208ENST00000478111 SETD1BQ9UPS6 1966 aaKnown RBP27.14■■□□□ 1.94
TRIM13-208ENST00000478111 C3P01024 1663 aa27.08■■□□□ 1.93
TRIM13-208ENST00000478111 ZNF777Q9ULD5 760 aaPredicted RBP27.08■■□□□ 1.93
TRIM13-208ENST00000478111 SYCP2Q9BX26 1530 aa27.07■■□□□ 1.92
TRIM13-208ENST00000478111 HNRNPMP52272 730 aaKnown RBP eCLIP27.04■■□□□ 1.92
TRIM13-208ENST00000478111 STRCQ7RTU9 1775 aa27.03■■□□□ 1.92
TRIM13-208ENST00000478111 KIAA1107Q9UPP5 1409 aa27.02■■□□□ 1.92
TRIM13-208ENST00000478111 UHRF1BP1Q6BDS2 1440 aa27■■□□□ 1.91
TRIM13-208ENST00000478111 CCNB3Q8WWL7 1395 aa27■■□□□ 1.91
TRIM13-208ENST00000478111 CFDP1Q9UEE9 299 aaPredicted RBP27■■□□□ 1.91
TRIM13-208ENST00000478111 MTUS2Q5JR59 1369 aa26.99■■□□□ 1.91
TRIM13-208ENST00000478111 SPAG9O60271 1321 aaKnown RBP26.99■■□□□ 1.91
TRIM13-208ENST00000478111 PLEKHH2Q8IVE3 1493 aa26.98■■□□□ 1.91
TRIM13-208ENST00000478111 INO80Q9ULG1 1556 aaPredicted RBP26.97■■□□□ 1.91
TRIM13-208ENST00000478111 ATP7AQ04656 1500 aa26.97■■□□□ 1.91
TRIM13-208ENST00000478111 SUPT6HQ7KZ85 1726 aaKnown RBP26.97■■□□□ 1.91
TRIM13-208ENST00000478111 TIAM1Q13009 1591 aa26.96■■□□□ 1.91
TRIM13-208ENST00000478111 ESF1Q9H501 851 aaKnown RBP26.95■■□□□ 1.9
TRIM13-208ENST00000478111 CEP162Q5TB80 1403 aa26.94■■□□□ 1.9
TRIM13-208ENST00000478111 CNTLNQ9NXG0 1405 aa26.94■■□□□ 1.9
TRIM13-208ENST00000478111 PLXNC1O60486 1568 aa26.93■■□□□ 1.9
TRIM13-208ENST00000478111 CERKQ8TCT0 537 aa26.93■■□□□ 1.9
TRIM13-208ENST00000478111 EHBP1L1Q8N3D4 1523 aa26.93■■□□□ 1.9
TRIM13-208ENST00000478111 MROH2AA6NES4 1674 aa26.92■■□□□ 1.9
TRIM13-208ENST00000478111 ZNF644Q9H582 1327 aaPredicted RBP26.91■■□□□ 1.9
TRIM13-208ENST00000478111 A2MP01023 1474 aa26.88■■□□□ 1.89
TRIM13-208ENST00000478111 MBD5Q9P267 1494 aa26.88■■□□□ 1.89
TRIM13-208ENST00000478111 DMRT2Q9Y5R5 561 aa26.87■■□□□ 1.89
TRIM13-208ENST00000478111 ZMYM3Q14202 1370 aa26.86■■□□□ 1.89
TRIM13-208ENST00000478111 CLTCQ00610 1675 aaKnown RBP26.85■■□□□ 1.89
TRIM13-208ENST00000478111 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
TRIM13-208ENST00000478111 NPATQ14207 1427 aa26.83■■□□□ 1.89
TRIM13-208ENST00000478111 PTPRTO14522 1441 aa26.82■■□□□ 1.88
TRIM13-208ENST00000478111 RTEL1-TNFRSF6BF6WH68 1400 aa26.78■■□□□ 1.88
TRIM13-208ENST00000478111 NCOA1Q15788 1441 aa26.78■■□□□ 1.88
TRIM13-208ENST00000478111 NCOA2Q15596 1464 aa26.78■■□□□ 1.88
TRIM13-208ENST00000478111 GGT6Q6P531 493 aa26.77■■□□□ 1.88
TRIM13-208ENST00000478111 PTPRKQ15262 1439 aa26.74■■□□□ 1.87
TRIM13-208ENST00000478111 CAMSAP1Q5T5Y3 1602 aa26.74■■□□□ 1.87
TRIM13-208ENST00000478111 PPP6R1Q9UPN7 881 aa26.73■■□□□ 1.87
TRIM13-208ENST00000478111 DHX29Q7Z478 1369 aaKnown RBP26.72■■□□□ 1.87
TRIM13-208ENST00000478111 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
TRIM13-208ENST00000478111 MYO3AQ8NEV4 1616 aa26.72■■□□□ 1.87
TRIM13-208ENST00000478111 ZNF142P52746 1687 aaPredicted RBP26.71■■□□□ 1.87
TRIM13-208ENST00000478111 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
TRIM13-208ENST00000478111 CCDC141Q6ZP82 1450 aa26.7■■□□□ 1.87
TRIM13-208ENST00000478111 LTBP4Q8N2S1 1624 aa26.7■■□□□ 1.86
TRIM13-208ENST00000478111 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
TRIM13-208ENST00000478111 RSPH4AQ5TD94 716 aa26.66■■□□□ 1.86
TRIM13-208ENST00000478111 CEP170BQ9Y4F5 1589 aaPredicted RBP26.66■■□□□ 1.86
TRIM13-208ENST00000478111 LRRC9Q6ZRR7 1453 aa26.65■■□□□ 1.86
TRIM13-208ENST00000478111 ARHGEF5Q12774 1597 aa26.64■■□□□ 1.86
TRIM13-208ENST00000478111 NCKAP5LQ9HCH0 1330 aa26.64■■□□□ 1.85
TRIM13-208ENST00000478111 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
TRIM13-208ENST00000478111 KIF3BO15066 747 aa26.61■■□□□ 1.85
TRIM13-208ENST00000478111 TCOF1Q13428 1488 aaKnown RBP26.6■■□□□ 1.85
TRIM13-208ENST00000478111 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
TRIM13-208ENST00000478111 KANK4Q5T7N3 995 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms