RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 FRMPD1Q5SYB0 1578 aa29.52■■■□□ 2.32
PLOD3-212ENST00000478082 LRRC9Q6ZRR7 1453 aa29.5■■■□□ 2.31
PLOD3-212ENST00000478082 GPATCH8Q9UKJ3 1502 aaKnown RBP29.5■■■□□ 2.31
PLOD3-212ENST00000478082 EFCAB2Q5VUJ9 269 aa29.49■■■□□ 2.31
PLOD3-212ENST00000478082 ADGRL1O94910 1474 aa29.48■■■□□ 2.31
PLOD3-212ENST00000478082 MAP3K1Q13233 1512 aa29.48■■■□□ 2.31
PLOD3-212ENST00000478082 DENND4BO75064 1496 aaPredicted RBP29.45■■■□□ 2.31
PLOD3-212ENST00000478082 SCAPERQ9BY12 1400 aa29.45■■■□□ 2.31
PLOD3-212ENST00000478082 RICTORQ6R327 1708 aa29.44■■■□□ 2.3
PLOD3-212ENST00000478082 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
PLOD3-212ENST00000478082 NCOA2Q15596 1464 aa29.43■■■□□ 2.3
PLOD3-212ENST00000478082 SUPT6HQ7KZ85 1726 aaKnown RBP29.42■■■□□ 2.3
PLOD3-212ENST00000478082 ZNF777Q9ULD5 760 aaPredicted RBP29.39■■■□□ 2.29
PLOD3-212ENST00000478082 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
PLOD3-212ENST00000478082 SAMD9LQ8IVG5 1584 aa29.38■■■□□ 2.29
PLOD3-212ENST00000478082 POGZQ7Z3K3 1410 aa29.38■■■□□ 2.29
PLOD3-212ENST00000478082 ABCC1P33527 1531 aa29.37■■■□□ 2.29
PLOD3-212ENST00000478082 APLP2Q06481 763 aa29.36■■■□□ 2.29
PLOD3-212ENST00000478082 CFDP1Q9UEE9 299 aaPredicted RBP29.35■■■□□ 2.29
PLOD3-212ENST00000478082 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
PLOD3-212ENST00000478082 ZNF644Q9H582 1327 aaPredicted RBP29.31■■■□□ 2.28
PLOD3-212ENST00000478082 ITSN2Q9NZM3 1697 aa29.31■■■□□ 2.28
PLOD3-212ENST00000478082 TRAPPC8Q9Y2L5 1435 aa29.31■■■□□ 2.28
PLOD3-212ENST00000478082 ZMYM4Q5VZL5 1548 aa29.3■■■□□ 2.28
PLOD3-212ENST00000478082 SYCP2Q9BX26 1530 aa29.29■■■□□ 2.28
PLOD3-212ENST00000478082 YEATS2Q9ULM3 1422 aa29.28■■■□□ 2.28
PLOD3-212ENST00000478082 ZNF518AQ6AHZ1 1483 aa29.26■■■□□ 2.28
PLOD3-212ENST00000478082 HNRNPMP52272 730 aaKnown RBP eCLIP29.26■■■□□ 2.27
PLOD3-212ENST00000478082 KDM5CP41229 1560 aa29.25■■■□□ 2.27
PLOD3-212ENST00000478082 ARHGEF40Q8TER5 1519 aa29.24■■■□□ 2.27
PLOD3-212ENST00000478082 ZFYVE16Q7Z3T8 1539 aa29.22■■■□□ 2.27
PLOD3-212ENST00000478082 KDM4FA0A1W2PPD8 638 aa29.19■■■□□ 2.26
PLOD3-212ENST00000478082 KIAA1107Q9UPP5 1409 aa29.19■■■□□ 2.26
PLOD3-212ENST00000478082 CAMSAP2Q08AD1 1489 aa29.19■■■□□ 2.26
PLOD3-212ENST00000478082 MAGI2Q86UL8 1455 aa29.18■■■□□ 2.26
PLOD3-212ENST00000478082 MYOM3Q5VTT5 1437 aa29.18■■■□□ 2.26
PLOD3-212ENST00000478082 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
PLOD3-212ENST00000478082 SIGLEC1Q9BZZ2 1709 aa29.16■■■□□ 2.26
PLOD3-212ENST00000478082 HECW2Q9P2P5 1572 aa29.16■■■□□ 2.26
PLOD3-212ENST00000478082 PPARGC1BQ86YN6 1023 aaKnown RBP29.16■■■□□ 2.26
PLOD3-212ENST00000478082 MBD5Q9P267 1494 aa29.16■■■□□ 2.26
PLOD3-212ENST00000478082 MYT1LQ9UL68 1186 aa29.13■■■□□ 2.25
PLOD3-212ENST00000478082 MLH3Q9UHC1 1453 aa29.12■■■□□ 2.25
PLOD3-212ENST00000478082 KIDINS220Q9ULH0 1771 aa29.1■■■□□ 2.25
PLOD3-212ENST00000478082 ABCA6Q8N139 1617 aa29.1■■■□□ 2.25
PLOD3-212ENST00000478082 DIP2CQ9Y2E4 1556 aa29.1■■■□□ 2.25
PLOD3-212ENST00000478082 MIA2Q96PC5 1412 aa29.08■■■□□ 2.25
PLOD3-212ENST00000478082 ATP10AO60312 1499 aa29.07■■■□□ 2.24
PLOD3-212ENST00000478082 SPAG9O60271 1321 aaKnown RBP29.06■■■□□ 2.24
PLOD3-212ENST00000478082 ARID4BQ4LE39 1312 aaPredicted RBP29.06■■■□□ 2.24
PLOD3-212ENST00000478082 C9orf84Q5VXU9 1444 aa29.04■■■□□ 2.24
PLOD3-212ENST00000478082 INO80Q9ULG1 1556 aaPredicted RBP29.04■■■□□ 2.24
PLOD3-212ENST00000478082 FGD6Q6ZV73 1430 aa29.03■■■□□ 2.24
PLOD3-212ENST00000478082 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
PLOD3-212ENST00000478082 CCDC141Q6ZP82 1450 aa29.03■■■□□ 2.24
PLOD3-212ENST00000478082 PTPN23Q9H3S7 1636 aa29.02■■■□□ 2.24
PLOD3-212ENST00000478082 ARHGEF5Q12774 1597 aa29■■■□□ 2.23
PLOD3-212ENST00000478082 BCORL1Q5H9F3 1711 aa28.98■■■□□ 2.23
PLOD3-212ENST00000478082 ADAMTSL3P82987 1691 aa28.95■■■□□ 2.22
PLOD3-212ENST00000478082 TCOF1Q13428 1488 aaKnown RBP28.95■■■□□ 2.22
PLOD3-212ENST00000478082 MLECQ14165 292 aa28.95■■■□□ 2.22
PLOD3-212ENST00000478082 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
PLOD3-212ENST00000478082 REREQ9P2R6 1566 aa28.94■■■□□ 2.22
PLOD3-212ENST00000478082 RSPH4AQ5TD94 716 aa28.92■■■□□ 2.22
PLOD3-212ENST00000478082 RTEL1-TNFRSF6BF6WH68 1400 aa28.91■■■□□ 2.22
PLOD3-212ENST00000478082 MADDQ8WXG6 1647 aa28.9■■■□□ 2.22
PLOD3-212ENST00000478082 ABCC5O15440 1437 aa28.89■■■□□ 2.21
PLOD3-212ENST00000478082 A2MP01023 1474 aa28.87■■■□□ 2.21
PLOD3-212ENST00000478082 TSPY4P0CV99 314 aa28.87■■■□□ 2.21
PLOD3-212ENST00000478082 TSPY10P0CW01 314 aa28.87■■■□□ 2.21
PLOD3-212ENST00000478082 ADGBQ8N7X0 1667 aa28.86■■■□□ 2.21
PLOD3-212ENST00000478082 PLXNC1O60486 1568 aa28.86■■■□□ 2.21
PLOD3-212ENST00000478082 FAM50AQ14320 339 aaKnown RBP28.85■■■□□ 2.21
PLOD3-212ENST00000478082 DAPK1P53355 1430 aa28.85■■■□□ 2.21
PLOD3-212ENST00000478082 AGLP35573 1532 aa28.85■■■□□ 2.21
PLOD3-212ENST00000478082 DNMT1P26358 1616 aaKnown RBP28.84■■■□□ 2.21
PLOD3-212ENST00000478082 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
PLOD3-212ENST00000478082 CROCC2H7BZ55 1655 aa28.83■■■□□ 2.21
PLOD3-212ENST00000478082 RIMS1Q86UR5 1692 aaKnown RBP28.81■■■□□ 2.2
PLOD3-212ENST00000478082 PTPRMP28827 1452 aa28.79■■■□□ 2.2
PLOD3-212ENST00000478082 FER1L4A9Z1Z3 1794 aa28.78■■■□□ 2.2
PLOD3-212ENST00000478082 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
PLOD3-212ENST00000478082 SHANK2Q9UPX8 1470 aa28.77■■■□□ 2.2
PLOD3-212ENST00000478082 CHIC2Q9UKJ5 165 aa28.76■■■□□ 2.19
PLOD3-212ENST00000478082 PLPPR3Q6T4P5 718 aa28.72■■■□□ 2.19
PLOD3-212ENST00000478082 PTPRKQ15262 1439 aa28.72■■■□□ 2.19
PLOD3-212ENST00000478082 RRP7BPQ9NSQ0 103 aa28.7■■■□□ 2.18
PLOD3-212ENST00000478082 GGT6Q6P531 493 aa28.69■■■□□ 2.18
PLOD3-212ENST00000478082 KIF15Q9NS87 1388 aa28.67■■■□□ 2.18
PLOD3-212ENST00000478082 RRBP1Q9P2E9 1410 aaKnown RBP28.67■■■□□ 2.18
PLOD3-212ENST00000478082 KIF3BO15066 747 aa28.67■■■□□ 2.18
PLOD3-212ENST00000478082 ITGAEP38570 1179 aa28.65■■■□□ 2.18
PLOD3-212ENST00000478082 CEBPAP49715 358 aaPredicted RBP28.65■■■□□ 2.18
PLOD3-212ENST00000478082 NCOA1Q15788 1441 aa28.63■■■□□ 2.17
PLOD3-212ENST00000478082 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
PLOD3-212ENST00000478082 ANKRD30AQ9BXX3 1397 aa28.61■■■□□ 2.17
PLOD3-212ENST00000478082 ADGRL2O95490 1459 aa28.61■■■□□ 2.17
PLOD3-212ENST00000478082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.17
PLOD3-212ENST00000478082 CLTCQ00610 1675 aaKnown RBP28.59■■■□□ 2.17
PLOD3-212ENST00000478082 ESF1Q9H501 851 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms