RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 MAGI2Q86UL8 1455 aa19.37■□□□□ 0.69
CPSF7-211ENST00000477890 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
CPSF7-211ENST00000477890 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
CPSF7-211ENST00000477890 KIF14Q15058 1648 aa19.35■□□□□ 0.69
CPSF7-211ENST00000477890 PCF11O94913 1555 aaKnown RBP19.35■□□□□ 0.69
CPSF7-211ENST00000477890 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
CPSF7-211ENST00000477890 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
CPSF7-211ENST00000477890 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
CPSF7-211ENST00000477890 LMTK3Q96Q04 1460 aa19.32■□□□□ 0.68
CPSF7-211ENST00000477890 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
CPSF7-211ENST00000477890 MLECQ14165 292 aa19.31■□□□□ 0.68
CPSF7-211ENST00000477890 CLIP1P30622 1438 aa19.31■□□□□ 0.68
CPSF7-211ENST00000477890 FER1L4A9Z1Z3 1794 aa19.29■□□□□ 0.68
CPSF7-211ENST00000477890 ARHGAP5Q13017 1502 aa19.29■□□□□ 0.68
CPSF7-211ENST00000477890 ATP10AO60312 1499 aa19.28■□□□□ 0.68
CPSF7-211ENST00000477890 C9orf84Q5VXU9 1444 aa19.26■□□□□ 0.67
CPSF7-211ENST00000477890 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
CPSF7-211ENST00000477890 CDC42BPBQ9Y5S2 1711 aa19.24■□□□□ 0.67
CPSF7-211ENST00000477890 HSPA2P54652 639 aa19.23■□□□□ 0.67
CPSF7-211ENST00000477890 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
CPSF7-211ENST00000477890 CASKIN1Q8WXD9 1431 aa19.23■□□□□ 0.67
CPSF7-211ENST00000477890 KDM5CP41229 1560 aa19.23■□□□□ 0.67
CPSF7-211ENST00000477890 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
CPSF7-211ENST00000477890 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
CPSF7-211ENST00000477890 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
CPSF7-211ENST00000477890 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
CPSF7-211ENST00000477890 PREX2Q70Z35 1606 aa19.2■□□□□ 0.66
CPSF7-211ENST00000477890 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
CPSF7-211ENST00000477890 ABCC1P33527 1531 aa19.15■□□□□ 0.66
CPSF7-211ENST00000477890 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
CPSF7-211ENST00000477890 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
CPSF7-211ENST00000477890 ABCA6Q8N139 1617 aa19.14■□□□□ 0.66
CPSF7-211ENST00000477890 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.66
CPSF7-211ENST00000477890 CEBPAP49715 358 aaPredicted RBP19.14■□□□□ 0.65
CPSF7-211ENST00000477890 TRAPPC8Q9Y2L5 1435 aa19.14■□□□□ 0.65
CPSF7-211ENST00000477890 MLH3Q9UHC1 1453 aa19.14■□□□□ 0.65
CPSF7-211ENST00000477890 PREX1Q8TCU6 1659 aa19.13■□□□□ 0.65
CPSF7-211ENST00000477890 REREQ9P2R6 1566 aa19.12■□□□□ 0.65
CPSF7-211ENST00000477890 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.64
CPSF7-211ENST00000477890 KIDINS220Q9ULH0 1771 aa19.08■□□□□ 0.64
CPSF7-211ENST00000477890 AGLP35573 1532 aa19.06■□□□□ 0.64
CPSF7-211ENST00000477890 SETD1BQ9UPS6 1966 aaKnown RBP19.06■□□□□ 0.64
CPSF7-211ENST00000477890 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
CPSF7-211ENST00000477890 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
CPSF7-211ENST00000477890 C3P01024 1663 aa19.05■□□□□ 0.64
CPSF7-211ENST00000477890 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
CPSF7-211ENST00000477890 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
CPSF7-211ENST00000477890 GPATCH8Q9UKJ3 1502 aaKnown RBP19.04■□□□□ 0.64
CPSF7-211ENST00000477890 CERKQ8TCT0 537 aa19.01■□□□□ 0.63
CPSF7-211ENST00000477890 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
CPSF7-211ENST00000477890 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
CPSF7-211ENST00000477890 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
CPSF7-211ENST00000477890 CFDP1Q9UEE9 299 aaPredicted RBP18.99■□□□□ 0.63
CPSF7-211ENST00000477890 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
CPSF7-211ENST00000477890 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
CPSF7-211ENST00000477890 SUPT6HQ7KZ85 1726 aaKnown RBP18.97■□□□□ 0.63
CPSF7-211ENST00000477890 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
CPSF7-211ENST00000477890 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
CPSF7-211ENST00000477890 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
CPSF7-211ENST00000477890 ATP7AQ04656 1500 aa18.96■□□□□ 0.63
CPSF7-211ENST00000477890 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
CPSF7-211ENST00000477890 INO80Q9ULG1 1556 aaPredicted RBP18.93■□□□□ 0.62
CPSF7-211ENST00000477890 MROH2AA6NES4 1674 aa18.92■□□□□ 0.62
CPSF7-211ENST00000477890 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
CPSF7-211ENST00000477890 TIAM1Q13009 1591 aa18.91■□□□□ 0.62
CPSF7-211ENST00000477890 A2MP01023 1474 aa18.9■□□□□ 0.62
CPSF7-211ENST00000477890 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
CPSF7-211ENST00000477890 ZMYM3Q14202 1370 aa18.89■□□□□ 0.61
CPSF7-211ENST00000477890 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
CPSF7-211ENST00000477890 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
CPSF7-211ENST00000477890 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
CPSF7-211ENST00000477890 PTPRTO14522 1441 aa18.88■□□□□ 0.61
CPSF7-211ENST00000477890 NPATQ14207 1427 aa18.87■□□□□ 0.61
CPSF7-211ENST00000477890 ADGBQ8N7X0 1667 aa18.87■□□□□ 0.61
CPSF7-211ENST00000477890 GGT6Q6P531 493 aa18.86■□□□□ 0.61
CPSF7-211ENST00000477890 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
CPSF7-211ENST00000477890 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
CPSF7-211ENST00000477890 CAMSAP1Q5T5Y3 1602 aa18.83■□□□□ 0.61
CPSF7-211ENST00000477890 MYO3AQ8NEV4 1616 aa18.81■□□□□ 0.6
CPSF7-211ENST00000477890 RTEL1-TNFRSF6BF6WH68 1400 aa18.8■□□□□ 0.6
CPSF7-211ENST00000477890 ZNF142P52746 1687 aaPredicted RBP18.79■□□□□ 0.6
CPSF7-211ENST00000477890 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
CPSF7-211ENST00000477890 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
CPSF7-211ENST00000477890 PPP6R1Q9UPN7 881 aa18.78■□□□□ 0.6
CPSF7-211ENST00000477890 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
CPSF7-211ENST00000477890 CAMSAP2Q08AD1 1489 aa18.77■□□□□ 0.59
CPSF7-211ENST00000477890 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
CPSF7-211ENST00000477890 NCKAP5LQ9HCH0 1330 aa18.76■□□□□ 0.59
CPSF7-211ENST00000477890 DHX29Q7Z478 1369 aaKnown RBP18.76■□□□□ 0.59
CPSF7-211ENST00000477890 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
CPSF7-211ENST00000477890 PLA2R1Q13018 1463 aa18.73■□□□□ 0.59
CPSF7-211ENST00000477890 KIF3BO15066 747 aa18.72■□□□□ 0.59
CPSF7-211ENST00000477890 RSPH4AQ5TD94 716 aa18.72■□□□□ 0.59
CPSF7-211ENST00000477890 PKD2Q13563 968 aa18.71■□□□□ 0.59
CPSF7-211ENST00000477890 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
CPSF7-211ENST00000477890 TCOF1Q13428 1488 aaKnown RBP18.7■□□□□ 0.58
CPSF7-211ENST00000477890 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
CPSF7-211ENST00000477890 A2ML1A8K2U0 1454 aa18.69■□□□□ 0.58
CPSF7-211ENST00000477890 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
CPSF7-211ENST00000477890 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms