RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
CNTN3-202ENST00000477856 SCRIBQ14160 1630 aa8.45□□□□□ -1.06
CNTN3-202ENST00000477856 UNC13AQ9UPW8 1703 aa8.44□□□□□ -1.06
CNTN3-202ENST00000477856 IFFO2Q5TF58 517 aa8.44□□□□□ -1.06
CNTN3-202ENST00000477856 ADGRD1Q6QNK2 874 aa8.44□□□□□ -1.06
CNTN3-202ENST00000477856 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
CNTN3-202ENST00000477856 A0A0G2JS52 829 aa8.42□□□□□ -1.06
CNTN3-202ENST00000477856 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
CNTN3-202ENST00000477856 CABP2Q9NPB3 220 aa8.41□□□□□ -1.06
CNTN3-202ENST00000477856 KHSRPQ92945 711 aaKnown RBP eCLIP8.4□□□□□ -1.06
CNTN3-202ENST00000477856 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
CNTN3-202ENST00000477856 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
CNTN3-202ENST00000477856 TMEM92Q6UXU6 159 aa8.38□□□□□ -1.07
CNTN3-202ENST00000477856 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
CNTN3-202ENST00000477856 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
CNTN3-202ENST00000477856 PTPN5P54829 565 aa8.35□□□□□ -1.07
CNTN3-202ENST00000477856 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
CNTN3-202ENST00000477856 TRAF7Q6Q0C0 670 aa8.33□□□□□ -1.08
CNTN3-202ENST00000477856 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
CNTN3-202ENST00000477856 TK2O00142 265 aa8.32□□□□□ -1.08
CNTN3-202ENST00000477856 GSE1Q14687 1217 aa8.32□□□□□ -1.08
CNTN3-202ENST00000477856 CHRM1P11229 460 aaPredicted RBP8.31□□□□□ -1.08
CNTN3-202ENST00000477856 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
CNTN3-202ENST00000477856 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
CNTN3-202ENST00000477856 HRO43593 1189 aa8.29□□□□□ -1.08
CNTN3-202ENST00000477856 NUDT7P0C024 238 aa8.29□□□□□ -1.08
CNTN3-202ENST00000477856 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
CNTN3-202ENST00000477856 ZNF787Q6DD87 383 aa8.22□□□□□ -1.09
CNTN3-202ENST00000477856 LCE2BO14633 110 aa8.21□□□□□ -1.1
CNTN3-202ENST00000477856 PSDA5PKW4 1024 aaPredicted RBP8.2□□□□□ -1.1
CNTN3-202ENST00000477856 GFRA3O60609 400 aa8.19□□□□□ -1.1
CNTN3-202ENST00000477856 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
CNTN3-202ENST00000477856 ZNF775Q96BV0 537 aaPredicted RBP8.19□□□□□ -1.1
CNTN3-202ENST00000477856 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
CNTN3-202ENST00000477856 PSEN2P49810 448 aa8.16□□□□□ -1.1
CNTN3-202ENST00000477856 EIF4G1Q04637 1599 aaKnown RBP8.16□□□□□ -1.1
CNTN3-202ENST00000477856 EHMT2Q96KQ7 1210 aa8.16□□□□□ -1.1
CNTN3-202ENST00000477856 BAZ1AQ9NRL2 1556 aaPredicted RBP8.14□□□□□ -1.11
CNTN3-202ENST00000477856 PCDHGA4Q9Y5G9 962 aa8.13□□□□□ -1.11
CNTN3-202ENST00000477856 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
CNTN3-202ENST00000477856 SMARCA4P51532 1647 aa8.11□□□□□ -1.11
CNTN3-202ENST00000477856 GOLGA8CPA6NN73 597 aa8.1□□□□□ -1.11
CNTN3-202ENST00000477856 KCNH8Q96L42 1107 aa8.1□□□□□ -1.11
CNTN3-202ENST00000477856 CECR2Q9BXF3 1484 aa8.1□□□□□ -1.11
CNTN3-202ENST00000477856 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
CNTN3-202ENST00000477856 KLHL34Q8N239 644 aa8.09□□□□□ -1.11
CNTN3-202ENST00000477856 KRTAP4-6Q9BYQ5 205 aa8.09□□□□□ -1.11
CNTN3-202ENST00000477856 CC2D2AQ9P2K1 1620 aa8.08□□□□□ -1.12
CNTN3-202ENST00000477856 SLC34A2O95436 690 aa8.06□□□□□ -1.12
CNTN3-202ENST00000477856 SOX12O15370 315 aa8.05□□□□□ -1.12
CNTN3-202ENST00000477856 WNT2BQ93097 391 aa8.05□□□□□ -1.12
CNTN3-202ENST00000477856 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
CNTN3-202ENST00000477856 MROH2BQ7Z745 1585 aa8.05□□□□□ -1.12
CNTN3-202ENST00000477856 PEG3Q9GZU2 1588 aa8.05□□□□□ -1.12
CNTN3-202ENST00000477856 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
CNTN3-202ENST00000477856 NRG2O14511 850 aaPredicted RBP8.03□□□□□ -1.12
CNTN3-202ENST00000477856 ITGBL1O95965 494 aaPredicted RBP8.03□□□□□ -1.12
CNTN3-202ENST00000477856 PPP4R3BQ5MIZ7 849 aa8.02□□□□□ -1.13
CNTN3-202ENST00000477856 ATAD2BQ9ULI0 1458 aa8.01□□□□□ -1.13
CNTN3-202ENST00000477856 KCNK17Q96T54 332 aa8.01□□□□□ -1.13
CNTN3-202ENST00000477856 HMGXB3Q12766 1538 aa8.01□□□□□ -1.13
CNTN3-202ENST00000477856 RSF1Q96T23 1441 aaPredicted RBP8.01□□□□□ -1.13
CNTN3-202ENST00000477856 NCAPD3P42695 1498 aa8□□□□□ -1.13
CNTN3-202ENST00000477856 MS4A4AQ96JQ5 239 aa8□□□□□ -1.13
CNTN3-202ENST00000477856 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
CNTN3-202ENST00000477856 BAZ1BQ9UIG0 1483 aaKnown RBP7.98□□□□□ -1.13
CNTN3-202ENST00000477856 WIZO95785 1651 aa7.98□□□□□ -1.13
CNTN3-202ENST00000477856 MRPL50Q8N5N7 158 aaKnown RBP7.96□□□□□ -1.14
CNTN3-202ENST00000477856 KCNC4Q03721 635 aa7.95□□□□□ -1.14
CNTN3-202ENST00000477856 PHF8Q9UPP1 1060 aa7.95□□□□□ -1.14
CNTN3-202ENST00000477856 KIF3CO14782 793 aa7.94□□□□□ -1.14
CNTN3-202ENST00000477856 TOP2AP11388 1531 aaKnown RBP7.93□□□□□ -1.14
CNTN3-202ENST00000477856 BHMG1C9JSJ3 638 aaPredicted RBP7.92□□□□□ -1.14
CNTN3-202ENST00000477856 SLC4A5Q9BY07 1137 aa7.92□□□□□ -1.14
CNTN3-202ENST00000477856 CIZ1Q9ULV3 898 aaPredicted RBP7.92□□□□□ -1.14
CNTN3-202ENST00000477856 KDM4FA0A1W2PPD8 638 aa7.89□□□□□ -1.15
CNTN3-202ENST00000477856 STK17AQ9UEE5 414 aa7.89□□□□□ -1.15
CNTN3-202ENST00000477856 TREML4Q6UXN2 200 aa7.88□□□□□ -1.15
CNTN3-202ENST00000477856 FBXO3Q9UK99 471 aa7.88□□□□□ -1.15
CNTN3-202ENST00000477856 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
CNTN3-202ENST00000477856 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
CNTN3-202ENST00000477856 NBPF3Q9H094 633 aa7.86□□□□□ -1.15
CNTN3-202ENST00000477856 SUPT5HO00267 1087 aaKnown RBP7.85□□□□□ -1.15
CNTN3-202ENST00000477856 NLRP6P59044 892 aa7.85□□□□□ -1.15
CNTN3-202ENST00000477856 NYAP1Q6ZVC0 841 aa7.84□□□□□ -1.15
CNTN3-202ENST00000477856 PDZRN3Q9UPQ7 1066 aa7.84□□□□□ -1.15
CNTN3-202ENST00000477856 ANKK1Q8NFD2 765 aa7.83□□□□□ -1.16
CNTN3-202ENST00000477856 PTCD2Q8WV60 388 aaKnown RBP7.82□□□□□ -1.16
CNTN3-202ENST00000477856 V9GY48 417 aaPredicted RBP7.8□□□□□ -1.16
CNTN3-202ENST00000477856 CCDC88BA6NC98 1476 aa7.8□□□□□ -1.16
CNTN3-202ENST00000477856 LAMC3Q9Y6N6 1575 aa7.8□□□□□ -1.16
CNTN3-202ENST00000477856 TBC1D12O60347 775 aa7.79□□□□□ -1.16
CNTN3-202ENST00000477856 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
CNTN3-202ENST00000477856 CADPSQ9ULU8 1353 aa7.77□□□□□ -1.17
CNTN3-202ENST00000477856 ZBED2Q9BTP6 218 aa7.77□□□□□ -1.17
CNTN3-202ENST00000477856 BCL2L12Q9HB09 334 aa7.77□□□□□ -1.17
CNTN3-202ENST00000477856 PTPREP23469 700 aa7.76□□□□□ -1.17
CNTN3-202ENST00000477856 CFTRP13569 1480 aa7.75□□□□□ -1.17
CNTN3-202ENST00000477856 BCAMP50895 628 aa7.75□□□□□ -1.17
CNTN3-202ENST00000477856 INSM1Q01101 510 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms