RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 KDM6BO15054 1643 aa20.66■□□□□ 0.9
EXOSC1-209ENST00000477692 PHLDB1Q86UU1 1377 aa20.65■□□□□ 0.9
EXOSC1-209ENST00000477692 ARHGAP5Q13017 1502 aa20.64■□□□□ 0.9
EXOSC1-209ENST00000477692 ITSN2Q9NZM3 1697 aa20.64■□□□□ 0.89
EXOSC1-209ENST00000477692 CCNB3Q8WWL7 1395 aa20.63■□□□□ 0.89
EXOSC1-209ENST00000477692 AKNAQ7Z591 1439 aa20.62■□□□□ 0.89
EXOSC1-209ENST00000477692 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
EXOSC1-209ENST00000477692 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
EXOSC1-209ENST00000477692 ADGRL1O94910 1474 aa20.56■□□□□ 0.88
EXOSC1-209ENST00000477692 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
EXOSC1-209ENST00000477692 CFDP1Q9UEE9 299 aaPredicted RBP20.55■□□□□ 0.88
EXOSC1-209ENST00000477692 ABCC1P33527 1531 aa20.53■□□□□ 0.88
EXOSC1-209ENST00000477692 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
EXOSC1-209ENST00000477692 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
EXOSC1-209ENST00000477692 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
EXOSC1-209ENST00000477692 FRMPD1Q5SYB0 1578 aa20.52■□□□□ 0.88
EXOSC1-209ENST00000477692 DENND4BO75064 1496 aaPredicted RBP20.52■□□□□ 0.88
EXOSC1-209ENST00000477692 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
EXOSC1-209ENST00000477692 ARHGEF12Q9NZN5 1544 aa20.49■□□□□ 0.87
EXOSC1-209ENST00000477692 RAPGEF3O95398 923 aa20.49■□□□□ 0.87
EXOSC1-209ENST00000477692 PLEKHH2Q8IVE3 1493 aa20.49■□□□□ 0.87
EXOSC1-209ENST00000477692 POGZQ7Z3K3 1410 aa20.48■□□□□ 0.87
EXOSC1-209ENST00000477692 MIA2Q96PC5 1412 aa20.48■□□□□ 0.87
EXOSC1-209ENST00000477692 KIAA1107Q9UPP5 1409 aa20.47■□□□□ 0.87
EXOSC1-209ENST00000477692 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
EXOSC1-209ENST00000477692 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
EXOSC1-209ENST00000477692 CAMSAP2Q08AD1 1489 aa20.46■□□□□ 0.87
EXOSC1-209ENST00000477692 ZNF644Q9H582 1327 aaPredicted RBP20.46■□□□□ 0.87
EXOSC1-209ENST00000477692 ZMYM4Q5VZL5 1548 aa20.44■□□□□ 0.86
EXOSC1-209ENST00000477692 TRAPPC8Q9Y2L5 1435 aa20.44■□□□□ 0.86
EXOSC1-209ENST00000477692 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
EXOSC1-209ENST00000477692 KDM5CP41229 1560 aa20.43■□□□□ 0.86
EXOSC1-209ENST00000477692 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
EXOSC1-209ENST00000477692 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
EXOSC1-209ENST00000477692 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
EXOSC1-209ENST00000477692 MBD5Q9P267 1494 aa20.42■□□□□ 0.86
EXOSC1-209ENST00000477692 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
EXOSC1-209ENST00000477692 TCOF1Q13428 1488 aaKnown RBP20.39■□□□□ 0.85
EXOSC1-209ENST00000477692 ARHGEF5Q12774 1597 aa20.38■□□□□ 0.85
EXOSC1-209ENST00000477692 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
EXOSC1-209ENST00000477692 HECW2Q9P2P5 1572 aa20.38■□□□□ 0.85
EXOSC1-209ENST00000477692 MLH3Q9UHC1 1453 aa20.36■□□□□ 0.85
EXOSC1-209ENST00000477692 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
EXOSC1-209ENST00000477692 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
EXOSC1-209ENST00000477692 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
EXOSC1-209ENST00000477692 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
EXOSC1-209ENST00000477692 KIDINS220Q9ULH0 1771 aa20.34■□□□□ 0.85
EXOSC1-209ENST00000477692 INO80Q9ULG1 1556 aaPredicted RBP20.33■□□□□ 0.84
EXOSC1-209ENST00000477692 YEATS2Q9ULM3 1422 aa20.32■□□□□ 0.84
EXOSC1-209ENST00000477692 DNMT1P26358 1616 aaKnown RBP20.31■□□□□ 0.84
EXOSC1-209ENST00000477692 SPAG9O60271 1321 aaKnown RBP20.3■□□□□ 0.84
EXOSC1-209ENST00000477692 ATP7AQ04656 1500 aa20.3■□□□□ 0.84
EXOSC1-209ENST00000477692 ABCA6Q8N139 1617 aa20.3■□□□□ 0.84
EXOSC1-209ENST00000477692 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
EXOSC1-209ENST00000477692 CROCC2H7BZ55 1655 aa20.29■□□□□ 0.84
EXOSC1-209ENST00000477692 MAST1Q9Y2H9 1570 aa20.28■□□□□ 0.84
EXOSC1-209ENST00000477692 RTEL1-TNFRSF6BF6WH68 1400 aa20.27■□□□□ 0.84
EXOSC1-209ENST00000477692 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
EXOSC1-209ENST00000477692 ABCC5O15440 1437 aa20.27■□□□□ 0.83
EXOSC1-209ENST00000477692 ATP10AO60312 1499 aa20.26■□□□□ 0.83
EXOSC1-209ENST00000477692 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
EXOSC1-209ENST00000477692 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
EXOSC1-209ENST00000477692 DAPK1P53355 1430 aa20.26■□□□□ 0.83
EXOSC1-209ENST00000477692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.25■□□□□ 0.83
EXOSC1-209ENST00000477692 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
EXOSC1-209ENST00000477692 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
EXOSC1-209ENST00000477692 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
EXOSC1-209ENST00000477692 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
EXOSC1-209ENST00000477692 SIGLEC1Q9BZZ2 1709 aa20.24■□□□□ 0.83
EXOSC1-209ENST00000477692 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
EXOSC1-209ENST00000477692 ADGBQ8N7X0 1667 aa20.22■□□□□ 0.83
EXOSC1-209ENST00000477692 PLXNC1O60486 1568 aa20.2■□□□□ 0.82
EXOSC1-209ENST00000477692 A2MP01023 1474 aa20.17■□□□□ 0.82
EXOSC1-209ENST00000477692 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
EXOSC1-209ENST00000477692 AGLP35573 1532 aa20.15■□□□□ 0.82
EXOSC1-209ENST00000477692 BCORL1Q5H9F3 1711 aa20.14■□□□□ 0.81
EXOSC1-209ENST00000477692 ADGRL2O95490 1459 aa20.14■□□□□ 0.81
EXOSC1-209ENST00000477692 ARID4BQ4LE39 1312 aaPredicted RBP20.13■□□□□ 0.81
EXOSC1-209ENST00000477692 DHX29Q7Z478 1369 aaKnown RBP20.12■□□□□ 0.81
EXOSC1-209ENST00000477692 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
EXOSC1-209ENST00000477692 NCOA1Q15788 1441 aa20.1■□□□□ 0.81
EXOSC1-209ENST00000477692 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
EXOSC1-209ENST00000477692 DUOX2Q9NRD8 1548 aa20.1■□□□□ 0.81
EXOSC1-209ENST00000477692 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
EXOSC1-209ENST00000477692 ITGAEP38570 1179 aa20.09■□□□□ 0.81
EXOSC1-209ENST00000477692 KIF15Q9NS87 1388 aa20.08■□□□□ 0.81
EXOSC1-209ENST00000477692 ROCK1Q13464 1354 aa20.08■□□□□ 0.8
EXOSC1-209ENST00000477692 EIF2AK4Q9P2K8 1649 aaKnown RBP20.07■□□□□ 0.8
EXOSC1-209ENST00000477692 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
EXOSC1-209ENST00000477692 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
EXOSC1-209ENST00000477692 MLECQ14165 292 aa20.04■□□□□ 0.8
EXOSC1-209ENST00000477692 MADDQ8WXG6 1647 aa20.04■□□□□ 0.8
EXOSC1-209ENST00000477692 ERBINQ96RT1 1412 aa20.03■□□□□ 0.8
EXOSC1-209ENST00000477692 FER1L4A9Z1Z3 1794 aa20.03■□□□□ 0.8
EXOSC1-209ENST00000477692 RNF17Q9BXT8 1623 aaKnown RBP20.01■□□□□ 0.79
EXOSC1-209ENST00000477692 KIF3BO15066 747 aa20■□□□□ 0.79
EXOSC1-209ENST00000477692 RIMS1Q86UR5 1692 aaKnown RBP19.99■□□□□ 0.79
EXOSC1-209ENST00000477692 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
EXOSC1-209ENST00000477692 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
EXOSC1-209ENST00000477692 GGT6Q6P531 493 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms