RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PLCH2O75038 1416 aa24.97■■□□□ 1.59
VHL-203ENST00000477538 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
VHL-203ENST00000477538 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
VHL-203ENST00000477538 PTPN23Q9H3S7 1636 aa24.93■■□□□ 1.58
VHL-203ENST00000477538 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
VHL-203ENST00000477538 MIA2Q96PC5 1412 aa24.91■■□□□ 1.58
VHL-203ENST00000477538 SAMD9LQ8IVG5 1584 aa24.9■■□□□ 1.58
VHL-203ENST00000477538 CFDP1Q9UEE9 299 aaPredicted RBP24.9■■□□□ 1.58
VHL-203ENST00000477538 FANCAO15360 1455 aa24.89■■□□□ 1.58
VHL-203ENST00000477538 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.57
VHL-203ENST00000477538 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
VHL-203ENST00000477538 EFCAB2Q5VUJ9 269 aa24.85■■□□□ 1.57
VHL-203ENST00000477538 NEO1Q92859 1461 aa24.84■■□□□ 1.57
VHL-203ENST00000477538 RRBP1Q9P2E9 1410 aaKnown RBP24.84■■□□□ 1.57
VHL-203ENST00000477538 TCOF1Q13428 1488 aaKnown RBP24.83■■□□□ 1.57
VHL-203ENST00000477538 ZNF777Q9ULD5 760 aaPredicted RBP24.83■■□□□ 1.57
VHL-203ENST00000477538 ABCC1P33527 1531 aa24.82■■□□□ 1.56
VHL-203ENST00000477538 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
VHL-203ENST00000477538 PLEKHH2Q8IVE3 1493 aa24.8■■□□□ 1.56
VHL-203ENST00000477538 SYCP2Q9BX26 1530 aa24.79■■□□□ 1.56
VHL-203ENST00000477538 ZNF644Q9H582 1327 aaPredicted RBP24.79■■□□□ 1.56
VHL-203ENST00000477538 ADGRL1O94910 1474 aa24.78■■□□□ 1.56
VHL-203ENST00000477538 CROCC2H7BZ55 1655 aa24.76■■□□□ 1.55
VHL-203ENST00000477538 ARHGEF5Q12774 1597 aa24.75■■□□□ 1.55
VHL-203ENST00000477538 DNMT1P26358 1616 aaKnown RBP24.75■■□□□ 1.55
VHL-203ENST00000477538 RICTORQ6R327 1708 aa24.75■■□□□ 1.55
VHL-203ENST00000477538 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
VHL-203ENST00000477538 ARHGEF12Q9NZN5 1544 aa24.73■■□□□ 1.55
VHL-203ENST00000477538 KIAA1107Q9UPP5 1409 aa24.73■■□□□ 1.55
VHL-203ENST00000477538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
VHL-203ENST00000477538 SCAPERQ9BY12 1400 aa24.71■■□□□ 1.55
VHL-203ENST00000477538 MBD5Q9P267 1494 aa24.7■■□□□ 1.54
VHL-203ENST00000477538 HNRNPMP52272 730 aaKnown RBP eCLIP24.68■■□□□ 1.54
VHL-203ENST00000477538 DENND4BO75064 1496 aaPredicted RBP24.67■■□□□ 1.54
VHL-203ENST00000477538 CCDC141Q6ZP82 1450 aa24.67■■□□□ 1.54
VHL-203ENST00000477538 KDM6BO15054 1643 aa24.67■■□□□ 1.54
VHL-203ENST00000477538 FRMPD1Q5SYB0 1578 aa24.67■■□□□ 1.54
VHL-203ENST00000477538 POGZQ7Z3K3 1410 aa24.66■■□□□ 1.54
VHL-203ENST00000477538 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
VHL-203ENST00000477538 ADGBQ8N7X0 1667 aa24.65■■□□□ 1.54
VHL-203ENST00000477538 ZNF518AQ6AHZ1 1483 aa24.64■■□□□ 1.54
VHL-203ENST00000477538 DAPK1P53355 1430 aa24.64■■□□□ 1.54
VHL-203ENST00000477538 KDM5CP41229 1560 aa24.63■■□□□ 1.53
VHL-203ENST00000477538 ABCC5O15440 1437 aa24.61■■□□□ 1.53
VHL-203ENST00000477538 RSPH4AQ5TD94 716 aa24.61■■□□□ 1.53
VHL-203ENST00000477538 COL17A1Q9UMD9 1497 aaPredicted RBP24.61■■□□□ 1.53
VHL-203ENST00000477538 MAST1Q9Y2H9 1570 aa24.61■■□□□ 1.53
VHL-203ENST00000477538 SHANK2Q9UPX8 1470 aa24.6■■□□□ 1.53
VHL-203ENST00000477538 HECW2Q9P2P5 1572 aa24.59■■□□□ 1.53
VHL-203ENST00000477538 INO80Q9ULG1 1556 aaPredicted RBP24.59■■□□□ 1.53
VHL-203ENST00000477538 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
VHL-203ENST00000477538 ZMYM4Q5VZL5 1548 aa24.58■■□□□ 1.53
VHL-203ENST00000477538 KIDINS220Q9ULH0 1771 aa24.57■■□□□ 1.52
VHL-203ENST00000477538 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
VHL-203ENST00000477538 ITGAEP38570 1179 aa24.57■■□□□ 1.52
VHL-203ENST00000477538 AFAP1Q8N556 730 aa24.57■■□□□ 1.52
VHL-203ENST00000477538 ZFYVE16Q7Z3T8 1539 aa24.56■■□□□ 1.52
VHL-203ENST00000477538 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
VHL-203ENST00000477538 C9orf84Q5VXU9 1444 aa24.55■■□□□ 1.52
VHL-203ENST00000477538 ATP7AQ04656 1500 aa24.55■■□□□ 1.52
VHL-203ENST00000477538 TSPY4P0CV99 314 aa24.53■■□□□ 1.52
VHL-203ENST00000477538 TSPY10P0CW01 314 aa24.53■■□□□ 1.52
VHL-203ENST00000477538 PLXNC1O60486 1568 aa24.52■■□□□ 1.52
VHL-203ENST00000477538 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
VHL-203ENST00000477538 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
VHL-203ENST00000477538 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
VHL-203ENST00000477538 ADGRL2O95490 1459 aa24.5■■□□□ 1.51
VHL-203ENST00000477538 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
VHL-203ENST00000477538 GCC2Q8IWJ2 1684 aa24.48■■□□□ 1.51
VHL-203ENST00000477538 CHIC2Q9UKJ5 165 aa24.48■■□□□ 1.51
VHL-203ENST00000477538 MAGI2Q86UL8 1455 aa24.47■■□□□ 1.51
VHL-203ENST00000477538 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
VHL-203ENST00000477538 DIP2CQ9Y2E4 1556 aa24.46■■□□□ 1.51
VHL-203ENST00000477538 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
VHL-203ENST00000477538 ROCK1Q13464 1354 aa24.44■■□□□ 1.5
VHL-203ENST00000477538 ANKRD30AQ9BXX3 1397 aa24.44■■□□□ 1.5
VHL-203ENST00000477538 NCOA1Q15788 1441 aa24.43■■□□□ 1.5
VHL-203ENST00000477538 YEATS2Q9ULM3 1422 aa24.42■■□□□ 1.5
VHL-203ENST00000477538 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
VHL-203ENST00000477538 DUOX2Q9NRD8 1548 aa24.38■■□□□ 1.49
VHL-203ENST00000477538 KIF15Q9NS87 1388 aa24.38■■□□□ 1.49
VHL-203ENST00000477538 HFM1A2PYH4 1435 aa24.36■■□□□ 1.49
VHL-203ENST00000477538 PCGF6Q9BYE7 350 aa24.36■■□□□ 1.49
VHL-203ENST00000477538 REREQ9P2R6 1566 aa24.35■■□□□ 1.49
VHL-203ENST00000477538 ATP10AO60312 1499 aa24.34■■□□□ 1.49
VHL-203ENST00000477538 NAIPQ13075 1403 aa24.34■■□□□ 1.49
VHL-203ENST00000477538 A2MP01023 1474 aa24.33■■□□□ 1.49
VHL-203ENST00000477538 EIF2AK4Q9P2K8 1649 aaKnown RBP24.33■■□□□ 1.49
VHL-203ENST00000477538 SIGLEC1Q9BZZ2 1709 aa24.32■■□□□ 1.48
VHL-203ENST00000477538 BCORL1Q5H9F3 1711 aa24.32■■□□□ 1.48
VHL-203ENST00000477538 ERBINQ96RT1 1412 aa24.29■■□□□ 1.48
VHL-203ENST00000477538 DHX29Q7Z478 1369 aaKnown RBP24.29■■□□□ 1.48
VHL-203ENST00000477538 ANKRD50Q9ULJ7 1429 aa24.28■■□□□ 1.48
VHL-203ENST00000477538 SETD5Q9C0A6 1442 aa24.27■■□□□ 1.48
VHL-203ENST00000477538 AGLP35573 1532 aa24.24■■□□□ 1.47
VHL-203ENST00000477538 RNF17Q9BXT8 1623 aaKnown RBP24.24■■□□□ 1.47
VHL-203ENST00000477538 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
VHL-203ENST00000477538 UNC13BO14795 1591 aa24.21■■□□□ 1.47
VHL-203ENST00000477538 RAB3GAP2Q9H2M9 1393 aa24.2■■□□□ 1.46
VHL-203ENST00000477538 MROH1Q8NDA8 1641 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms