RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 KIF14Q15058 1648 aa18.66■□□□□ 0.58
HDLBP-236ENST00000477477 CLIP1P30622 1438 aa18.65■□□□□ 0.58
HDLBP-236ENST00000477477 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.57
HDLBP-236ENST00000477477 ILDR1Q86SU0 546 aaPredicted RBP18.64■□□□□ 0.57
HDLBP-236ENST00000477477 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
HDLBP-236ENST00000477477 LRRIQ1Q96JM4 1722 aa18.61■□□□□ 0.57
HDLBP-236ENST00000477477 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
HDLBP-236ENST00000477477 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
HDLBP-236ENST00000477477 PCF11O94913 1555 aaKnown RBP18.6■□□□□ 0.57
HDLBP-236ENST00000477477 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
HDLBP-236ENST00000477477 CCDC18Q5T9S5 1454 aa18.59■□□□□ 0.57
HDLBP-236ENST00000477477 RIMS1Q86UR5 1692 aaKnown RBP18.59■□□□□ 0.57
HDLBP-236ENST00000477477 ZNF518AQ6AHZ1 1483 aa18.57■□□□□ 0.56
HDLBP-236ENST00000477477 ATP10AO60312 1499 aa18.56■□□□□ 0.56
HDLBP-236ENST00000477477 LMTK3Q96Q04 1460 aa18.56■□□□□ 0.56
HDLBP-236ENST00000477477 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
HDLBP-236ENST00000477477 KDM5CP41229 1560 aa18.55■□□□□ 0.56
HDLBP-236ENST00000477477 FYCO1Q9BQS8 1478 aa18.54■□□□□ 0.56
HDLBP-236ENST00000477477 MLECQ14165 292 aa18.54■□□□□ 0.56
HDLBP-236ENST00000477477 AFAP1Q8N556 730 aa18.52■□□□□ 0.56
HDLBP-236ENST00000477477 ARHGEF12Q9NZN5 1544 aa18.51■□□□□ 0.55
HDLBP-236ENST00000477477 PREX2Q70Z35 1606 aa18.51■□□□□ 0.55
HDLBP-236ENST00000477477 CDC42BPBQ9Y5S2 1711 aa18.5■□□□□ 0.55
HDLBP-236ENST00000477477 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
HDLBP-236ENST00000477477 ABCC1P33527 1531 aa18.49■□□□□ 0.55
HDLBP-236ENST00000477477 FER1L4A9Z1Z3 1794 aa18.48■□□□□ 0.55
HDLBP-236ENST00000477477 MLH3Q9UHC1 1453 aa18.47■□□□□ 0.55
HDLBP-236ENST00000477477 TRAPPC8Q9Y2L5 1435 aa18.47■□□□□ 0.55
HDLBP-236ENST00000477477 DIP2CQ9Y2E4 1556 aa18.47■□□□□ 0.55
HDLBP-236ENST00000477477 MYT1LQ9UL68 1186 aa18.45■□□□□ 0.54
HDLBP-236ENST00000477477 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
HDLBP-236ENST00000477477 ABCA6Q8N139 1617 aa18.43■□□□□ 0.54
HDLBP-236ENST00000477477 HSPA2P54652 639 aa18.43■□□□□ 0.54
HDLBP-236ENST00000477477 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
HDLBP-236ENST00000477477 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
HDLBP-236ENST00000477477 GPATCH8Q9UKJ3 1502 aaKnown RBP18.4■□□□□ 0.54
HDLBP-236ENST00000477477 AGLP35573 1532 aa18.39■□□□□ 0.54
HDLBP-236ENST00000477477 FBXO41Q8TF61 875 aa18.39■□□□□ 0.53
HDLBP-236ENST00000477477 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
HDLBP-236ENST00000477477 SAMD9LQ8IVG5 1584 aa18.38■□□□□ 0.53
HDLBP-236ENST00000477477 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
HDLBP-236ENST00000477477 SYCP2Q9BX26 1530 aa18.36■□□□□ 0.53
HDLBP-236ENST00000477477 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
HDLBP-236ENST00000477477 MTUS2Q5JR59 1369 aa18.35■□□□□ 0.53
HDLBP-236ENST00000477477 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
HDLBP-236ENST00000477477 PREX1Q8TCU6 1659 aa18.34■□□□□ 0.53
HDLBP-236ENST00000477477 KIAA1107Q9UPP5 1409 aa18.33■□□□□ 0.53
HDLBP-236ENST00000477477 CFDP1Q9UEE9 299 aaPredicted RBP18.33■□□□□ 0.52
HDLBP-236ENST00000477477 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.52
HDLBP-236ENST00000477477 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
HDLBP-236ENST00000477477 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
HDLBP-236ENST00000477477 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
HDLBP-236ENST00000477477 HNRNPMP52272 730 aaKnown RBP eCLIP18.31■□□□□ 0.52
HDLBP-236ENST00000477477 EHBP1L1Q8N3D4 1523 aa18.29■□□□□ 0.52
HDLBP-236ENST00000477477 ESF1Q9H501 851 aaKnown RBP18.29■□□□□ 0.52
HDLBP-236ENST00000477477 CNTLNQ9NXG0 1405 aa18.29■□□□□ 0.52
HDLBP-236ENST00000477477 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
HDLBP-236ENST00000477477 C3P01024 1663 aa18.28■□□□□ 0.52
HDLBP-236ENST00000477477 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
HDLBP-236ENST00000477477 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.52
HDLBP-236ENST00000477477 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
HDLBP-236ENST00000477477 A2MP01023 1474 aa18.24■□□□□ 0.51
HDLBP-236ENST00000477477 SETD1BQ9UPS6 1966 aaKnown RBP18.23■□□□□ 0.51
HDLBP-236ENST00000477477 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
HDLBP-236ENST00000477477 MBD5Q9P267 1494 aa18.21■□□□□ 0.51
HDLBP-236ENST00000477477 CERKQ8TCT0 537 aa18.21■□□□□ 0.51
HDLBP-236ENST00000477477 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
HDLBP-236ENST00000477477 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
HDLBP-236ENST00000477477 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
HDLBP-236ENST00000477477 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
HDLBP-236ENST00000477477 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
HDLBP-236ENST00000477477 NPATQ14207 1427 aa18.19■□□□□ 0.5
HDLBP-236ENST00000477477 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
HDLBP-236ENST00000477477 RTEL1-TNFRSF6BF6WH68 1400 aa18.16■□□□□ 0.5
HDLBP-236ENST00000477477 PTPRTO14522 1441 aa18.15■□□□□ 0.5
HDLBP-236ENST00000477477 GGT6Q6P531 493 aa18.15■□□□□ 0.5
HDLBP-236ENST00000477477 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
HDLBP-236ENST00000477477 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
HDLBP-236ENST00000477477 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
HDLBP-236ENST00000477477 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.49
HDLBP-236ENST00000477477 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
HDLBP-236ENST00000477477 CLTCQ00610 1675 aaKnown RBP18.13■□□□□ 0.49
HDLBP-236ENST00000477477 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
HDLBP-236ENST00000477477 PTPRKQ15262 1439 aa18.12■□□□□ 0.49
HDLBP-236ENST00000477477 LOC105371045A0A1W2PR82 267 aa18.11■□□□□ 0.49
HDLBP-236ENST00000477477 DHX29Q7Z478 1369 aaKnown RBP18.11■□□□□ 0.49
HDLBP-236ENST00000477477 LRRC9Q6ZRR7 1453 aa18.09■□□□□ 0.49
HDLBP-236ENST00000477477 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
HDLBP-236ENST00000477477 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
HDLBP-236ENST00000477477 MYO3AQ8NEV4 1616 aa18.08■□□□□ 0.48
HDLBP-236ENST00000477477 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
HDLBP-236ENST00000477477 ARHGEF5Q12774 1597 aa18.06■□□□□ 0.48
HDLBP-236ENST00000477477 CEP170BQ9Y4F5 1589 aaPredicted RBP18.05■□□□□ 0.48
HDLBP-236ENST00000477477 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
HDLBP-236ENST00000477477 PLA2R1Q13018 1463 aa18.04■□□□□ 0.48
HDLBP-236ENST00000477477 KIF3BO15066 747 aa18.04■□□□□ 0.48
HDLBP-236ENST00000477477 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
HDLBP-236ENST00000477477 LTBP4Q8N2S1 1624 aa18.03■□□□□ 0.48
HDLBP-236ENST00000477477 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
HDLBP-236ENST00000477477 NCKAP5LQ9HCH0 1330 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms