RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ARHGAP5Q13017 1502 aa26.02■■□□□ 1.76
EPHB4-204ENST00000477446 FANCAO15360 1455 aa26.02■■□□□ 1.76
EPHB4-204ENST00000477446 PHLDB1Q86UU1 1377 aa26■■□□□ 1.75
EPHB4-204ENST00000477446 EFCAB2Q5VUJ9 269 aa25.99■■□□□ 1.75
EPHB4-204ENST00000477446 CFDP1Q9UEE9 299 aaPredicted RBP25.99■■□□□ 1.75
EPHB4-204ENST00000477446 CFAP74Q9C0B2 1584 aa25.98■■□□□ 1.75
EPHB4-204ENST00000477446 NEO1Q92859 1461 aa25.98■■□□□ 1.75
EPHB4-204ENST00000477446 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
EPHB4-204ENST00000477446 AKNAQ7Z591 1439 aa25.94■■□□□ 1.74
EPHB4-204ENST00000477446 ZNF777Q9ULD5 760 aaPredicted RBP25.94■■□□□ 1.74
EPHB4-204ENST00000477446 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
EPHB4-204ENST00000477446 TRIM26Q12899 539 aaPredicted RBP25.92■■□□□ 1.74
EPHB4-204ENST00000477446 SAMD9LQ8IVG5 1584 aa25.91■■□□□ 1.74
EPHB4-204ENST00000477446 MIA2Q96PC5 1412 aa25.9■■□□□ 1.74
EPHB4-204ENST00000477446 ZNF644Q9H582 1327 aaPredicted RBP25.89■■□□□ 1.73
EPHB4-204ENST00000477446 ADGRL1O94910 1474 aa25.88■■□□□ 1.73
EPHB4-204ENST00000477446 FGD6Q6ZV73 1430 aa25.88■■□□□ 1.73
EPHB4-204ENST00000477446 COL17A1Q9UMD9 1497 aaPredicted RBP25.86■■□□□ 1.73
EPHB4-204ENST00000477446 ABCC1P33527 1531 aa25.85■■□□□ 1.73
EPHB4-204ENST00000477446 SCAPERQ9BY12 1400 aa25.85■■□□□ 1.73
EPHB4-204ENST00000477446 KDM6BO15054 1643 aa25.84■■□□□ 1.73
EPHB4-204ENST00000477446 CAMSAP2Q08AD1 1489 aa25.84■■□□□ 1.73
EPHB4-204ENST00000477446 PTPN23Q9H3S7 1636 aa25.84■■□□□ 1.73
EPHB4-204ENST00000477446 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
EPHB4-204ENST00000477446 PLEKHH2Q8IVE3 1493 aa25.82■■□□□ 1.72
EPHB4-204ENST00000477446 SYCP2Q9BX26 1530 aa25.81■■□□□ 1.72
EPHB4-204ENST00000477446 KIAA1107Q9UPP5 1409 aa25.81■■□□□ 1.72
EPHB4-204ENST00000477446 DENND4BO75064 1496 aaPredicted RBP25.81■■□□□ 1.72
EPHB4-204ENST00000477446 HNRNPMP52272 730 aaKnown RBP eCLIP25.8■■□□□ 1.72
EPHB4-204ENST00000477446 RAPGEF3O95398 923 aa25.79■■□□□ 1.72
EPHB4-204ENST00000477446 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
EPHB4-204ENST00000477446 RICTORQ6R327 1708 aa25.78■■□□□ 1.72
EPHB4-204ENST00000477446 MBD5Q9P267 1494 aa25.77■■□□□ 1.72
EPHB4-204ENST00000477446 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
EPHB4-204ENST00000477446 TRAPPC8Q9Y2L5 1435 aa25.76■■□□□ 1.71
EPHB4-204ENST00000477446 FRMPD1Q5SYB0 1578 aa25.76■■□□□ 1.71
EPHB4-204ENST00000477446 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
EPHB4-204ENST00000477446 FAM50AQ14320 339 aaKnown RBP25.73■■□□□ 1.71
EPHB4-204ENST00000477446 ZNF518AQ6AHZ1 1483 aa25.73■■□□□ 1.71
EPHB4-204ENST00000477446 RRBP1Q9P2E9 1410 aaKnown RBP25.73■■□□□ 1.71
EPHB4-204ENST00000477446 ARHGEF5Q12774 1597 aa25.71■■□□□ 1.71
EPHB4-204ENST00000477446 KDM5CP41229 1560 aa25.69■■□□□ 1.7
EPHB4-204ENST00000477446 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
EPHB4-204ENST00000477446 CCDC141Q6ZP82 1450 aa25.67■■□□□ 1.7
EPHB4-204ENST00000477446 ZMYM4Q5VZL5 1548 aa25.66■■□□□ 1.7
EPHB4-204ENST00000477446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.66■■□□□ 1.7
EPHB4-204ENST00000477446 DNMT1P26358 1616 aaKnown RBP25.65■■□□□ 1.7
EPHB4-204ENST00000477446 HRCP23327 699 aa25.64■■□□□ 1.69
EPHB4-204ENST00000477446 ABCC5O15440 1437 aa25.63■■□□□ 1.69
EPHB4-204ENST00000477446 DAPK1P53355 1430 aa25.63■■□□□ 1.69
EPHB4-204ENST00000477446 SPAG9O60271 1321 aaKnown RBP25.62■■□□□ 1.69
EPHB4-204ENST00000477446 HECW2Q9P2P5 1572 aa25.62■■□□□ 1.69
EPHB4-204ENST00000477446 MLH3Q9UHC1 1453 aa25.61■■□□□ 1.69
EPHB4-204ENST00000477446 CROCC2H7BZ55 1655 aa25.61■■□□□ 1.69
EPHB4-204ENST00000477446 TSPY4P0CV99 314 aa25.61■■□□□ 1.69
EPHB4-204ENST00000477446 TSPY10P0CW01 314 aa25.61■■□□□ 1.69
EPHB4-204ENST00000477446 MAGI2Q86UL8 1455 aa25.6■■□□□ 1.69
EPHB4-204ENST00000477446 KIDINS220Q9ULH0 1771 aa25.59■■□□□ 1.69
EPHB4-204ENST00000477446 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
EPHB4-204ENST00000477446 INO80Q9ULG1 1556 aaPredicted RBP25.58■■□□□ 1.69
EPHB4-204ENST00000477446 ATP7AQ04656 1500 aa25.57■■□□□ 1.68
EPHB4-204ENST00000477446 ZFYVE16Q7Z3T8 1539 aa25.57■■□□□ 1.68
EPHB4-204ENST00000477446 YEATS2Q9ULM3 1422 aa25.57■■□□□ 1.68
EPHB4-204ENST00000477446 RTEL1-TNFRSF6BF6WH68 1400 aa25.56■■□□□ 1.68
EPHB4-204ENST00000477446 MAST1Q9Y2H9 1570 aa25.56■■□□□ 1.68
EPHB4-204ENST00000477446 ITGAEP38570 1179 aa25.56■■□□□ 1.68
EPHB4-204ENST00000477446 SHANK2Q9UPX8 1470 aa25.56■■□□□ 1.68
EPHB4-204ENST00000477446 C9orf84Q5VXU9 1444 aa25.55■■□□□ 1.68
EPHB4-204ENST00000477446 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
EPHB4-204ENST00000477446 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
EPHB4-204ENST00000477446 ARHGEF40Q8TER5 1519 aa25.52■■□□□ 1.68
EPHB4-204ENST00000477446 ABCA6Q8N139 1617 aa25.52■■□□□ 1.68
EPHB4-204ENST00000477446 DIP2CQ9Y2E4 1556 aa25.51■■□□□ 1.67
EPHB4-204ENST00000477446 ADGBQ8N7X0 1667 aa25.47■■□□□ 1.67
EPHB4-204ENST00000477446 ATP10AO60312 1499 aa25.47■■□□□ 1.67
EPHB4-204ENST00000477446 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
EPHB4-204ENST00000477446 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
EPHB4-204ENST00000477446 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
EPHB4-204ENST00000477446 NCOA1Q15788 1441 aa25.44■■□□□ 1.66
EPHB4-204ENST00000477446 RRP7BPQ9NSQ0 103 aa25.43■■□□□ 1.66
EPHB4-204ENST00000477446 SIGLEC1Q9BZZ2 1709 aa25.41■■□□□ 1.66
EPHB4-204ENST00000477446 ROCK1Q13464 1354 aa25.4■■□□□ 1.66
EPHB4-204ENST00000477446 A2MP01023 1474 aa25.4■■□□□ 1.66
EPHB4-204ENST00000477446 REREQ9P2R6 1566 aa25.4■■□□□ 1.66
EPHB4-204ENST00000477446 KIF15Q9NS87 1388 aa25.39■■□□□ 1.66
EPHB4-204ENST00000477446 DHX29Q7Z478 1369 aaKnown RBP25.37■■□□□ 1.65
EPHB4-204ENST00000477446 DUOX2Q9NRD8 1548 aa25.36■■□□□ 1.65
EPHB4-204ENST00000477446 AGLP35573 1532 aa25.32■■□□□ 1.64
EPHB4-204ENST00000477446 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
EPHB4-204ENST00000477446 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
EPHB4-204ENST00000477446 NAIPQ13075 1403 aa25.28■■□□□ 1.64
EPHB4-204ENST00000477446 HFM1A2PYH4 1435 aa25.27■■□□□ 1.64
EPHB4-204ENST00000477446 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
EPHB4-204ENST00000477446 GCC2Q8IWJ2 1684 aa25.27■■□□□ 1.64
EPHB4-204ENST00000477446 EIF2AK4Q9P2K8 1649 aaKnown RBP25.27■■□□□ 1.64
EPHB4-204ENST00000477446 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
EPHB4-204ENST00000477446 KIF3BO15066 747 aa25.26■■□□□ 1.63
EPHB4-204ENST00000477446 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
EPHB4-204ENST00000477446 MLECQ14165 292 aa25.22■■□□□ 1.63
EPHB4-204ENST00000477446 GGT6Q6P531 493 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms