RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 TROQ12816 1431 aaPredicted RBP21.5■■□□□ 1.03
SRSF3-203ENST00000477442 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
SRSF3-203ENST00000477442 POGZQ7Z3K3 1410 aa21.49■■□□□ 1.03
SRSF3-203ENST00000477442 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
SRSF3-203ENST00000477442 PCF11O94913 1555 aaKnown RBP21.48■■□□□ 1.03
SRSF3-203ENST00000477442 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
SRSF3-203ENST00000477442 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
SRSF3-203ENST00000477442 MLECQ14165 292 aa21.44■■□□□ 1.02
SRSF3-203ENST00000477442 CLIP1P30622 1438 aa21.44■■□□□ 1.02
SRSF3-203ENST00000477442 MAGI2Q86UL8 1455 aa21.44■■□□□ 1.02
SRSF3-203ENST00000477442 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
SRSF3-203ENST00000477442 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
SRSF3-203ENST00000477442 ARHGAP5Q13017 1502 aa21.43■■□□□ 1.02
SRSF3-203ENST00000477442 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
SRSF3-203ENST00000477442 LMTK3Q96Q04 1460 aa21.38■■□□□ 1.01
SRSF3-203ENST00000477442 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
SRSF3-203ENST00000477442 ATP10AO60312 1499 aa21.37■■□□□ 1.01
SRSF3-203ENST00000477442 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
SRSF3-203ENST00000477442 ZNF518AQ6AHZ1 1483 aa21.35■■□□□ 1.01
SRSF3-203ENST00000477442 C9orf84Q5VXU9 1444 aa21.34■■□□□ 1.01
SRSF3-203ENST00000477442 KDM5CP41229 1560 aa21.34■■□□□ 1.01
SRSF3-203ENST00000477442 PREX2Q70Z35 1606 aa21.33■■□□□ 1.01
SRSF3-203ENST00000477442 FYCO1Q9BQS8 1478 aa21.33■■□□□ 1.01
SRSF3-203ENST00000477442 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1
SRSF3-203ENST00000477442 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1
SRSF3-203ENST00000477442 TRAPPC8Q9Y2L5 1435 aa21.31■■□□□ 1
SRSF3-203ENST00000477442 HSPA2P54652 639 aa21.31■■□□□ 1
SRSF3-203ENST00000477442 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
SRSF3-203ENST00000477442 ABCC1P33527 1531 aa21.29■■□□□ 1
SRSF3-203ENST00000477442 DIP2CQ9Y2E4 1556 aa21.29■■□□□ 1
SRSF3-203ENST00000477442 CDC42BPAQ5VT25 1732 aa21.29■■□□□ 1
SRSF3-203ENST00000477442 ABCA6Q8N139 1617 aa21.27■■□□□ 1
SRSF3-203ENST00000477442 ITSN2Q9NZM3 1697 aa21.26■□□□□ 0.99
SRSF3-203ENST00000477442 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
SRSF3-203ENST00000477442 ZNF777Q9ULD5 760 aaPredicted RBP21.24■□□□□ 0.99
SRSF3-203ENST00000477442 MLH3Q9UHC1 1453 aa21.24■□□□□ 0.99
SRSF3-203ENST00000477442 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
SRSF3-203ENST00000477442 SAMD9LQ8IVG5 1584 aa21.21■□□□□ 0.99
SRSF3-203ENST00000477442 KIDINS220Q9ULH0 1771 aa21.2■□□□□ 0.98
SRSF3-203ENST00000477442 REREQ9P2R6 1566 aa21.19■□□□□ 0.98
SRSF3-203ENST00000477442 SYCP2Q9BX26 1530 aa21.19■□□□□ 0.98
SRSF3-203ENST00000477442 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
SRSF3-203ENST00000477442 MTUS2Q5JR59 1369 aa21.15■□□□□ 0.98
SRSF3-203ENST00000477442 AGLP35573 1532 aa21.14■□□□□ 0.98
SRSF3-203ENST00000477442 FBXO41Q8TF61 875 aa21.14■□□□□ 0.97
SRSF3-203ENST00000477442 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
SRSF3-203ENST00000477442 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
SRSF3-203ENST00000477442 CFDP1Q9UEE9 299 aaPredicted RBP21.13■□□□□ 0.97
SRSF3-203ENST00000477442 PREX1Q8TCU6 1659 aa21.12■□□□□ 0.97
SRSF3-203ENST00000477442 SPAG9O60271 1321 aaKnown RBP21.1■□□□□ 0.97
SRSF3-203ENST00000477442 C3P01024 1663 aa21.1■□□□□ 0.97
SRSF3-203ENST00000477442 ZNF644Q9H582 1327 aaPredicted RBP21.09■□□□□ 0.97
SRSF3-203ENST00000477442 TIAM1Q13009 1591 aa21.08■□□□□ 0.97
SRSF3-203ENST00000477442 KIAA1107Q9UPP5 1409 aa21.07■□□□□ 0.96
SRSF3-203ENST00000477442 ATP7AQ04656 1500 aa21.06■□□□□ 0.96
SRSF3-203ENST00000477442 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
SRSF3-203ENST00000477442 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
SRSF3-203ENST00000477442 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
SRSF3-203ENST00000477442 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
SRSF3-203ENST00000477442 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
SRSF3-203ENST00000477442 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
SRSF3-203ENST00000477442 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
SRSF3-203ENST00000477442 STRCQ7RTU9 1775 aa21.02■□□□□ 0.96
SRSF3-203ENST00000477442 A2MP01023 1474 aa21.01■□□□□ 0.95
SRSF3-203ENST00000477442 SETD1BQ9UPS6 1966 aaKnown RBP21■□□□□ 0.95
SRSF3-203ENST00000477442 PLXNC1O60486 1568 aa21■□□□□ 0.95
SRSF3-203ENST00000477442 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
SRSF3-203ENST00000477442 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
SRSF3-203ENST00000477442 CERKQ8TCT0 537 aa20.98■□□□□ 0.95
SRSF3-203ENST00000477442 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
SRSF3-203ENST00000477442 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
SRSF3-203ENST00000477442 GGT6Q6P531 493 aa20.95■□□□□ 0.94
SRSF3-203ENST00000477442 CLTCQ00610 1675 aaKnown RBP20.95■□□□□ 0.94
SRSF3-203ENST00000477442 MROH2AA6NES4 1674 aa20.94■□□□□ 0.94
SRSF3-203ENST00000477442 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
SRSF3-203ENST00000477442 CAMSAP2Q08AD1 1489 aa20.91■□□□□ 0.94
SRSF3-203ENST00000477442 NPATQ14207 1427 aa20.9■□□□□ 0.94
SRSF3-203ENST00000477442 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.94
SRSF3-203ENST00000477442 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
SRSF3-203ENST00000477442 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
SRSF3-203ENST00000477442 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
SRSF3-203ENST00000477442 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
SRSF3-203ENST00000477442 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
SRSF3-203ENST00000477442 PTPRTO14522 1441 aa20.86■□□□□ 0.93
SRSF3-203ENST00000477442 DHX29Q7Z478 1369 aaKnown RBP20.85■□□□□ 0.93
SRSF3-203ENST00000477442 LRRC9Q6ZRR7 1453 aa20.85■□□□□ 0.93
SRSF3-203ENST00000477442 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
SRSF3-203ENST00000477442 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
SRSF3-203ENST00000477442 MYO3AQ8NEV4 1616 aa20.83■□□□□ 0.93
SRSF3-203ENST00000477442 KIF3BO15066 747 aa20.82■□□□□ 0.92
SRSF3-203ENST00000477442 NCKAP5LQ9HCH0 1330 aa20.81■□□□□ 0.92
SRSF3-203ENST00000477442 ARHGEF5Q12774 1597 aa20.79■□□□□ 0.92
SRSF3-203ENST00000477442 CEP170BQ9Y4F5 1589 aaPredicted RBP20.79■□□□□ 0.92
SRSF3-203ENST00000477442 ZNF142P52746 1687 aaPredicted RBP20.79■□□□□ 0.92
SRSF3-203ENST00000477442 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
SRSF3-203ENST00000477442 LTBP4Q8N2S1 1624 aa20.78■□□□□ 0.92
SRSF3-203ENST00000477442 RSPH4AQ5TD94 716 aa20.77■□□□□ 0.92
SRSF3-203ENST00000477442 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
SRSF3-203ENST00000477442 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
SRSF3-203ENST00000477442 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms