RNA–Protein interactions for RNA: ENST00000477160.1

GFRA4-203, Transcript of GDNF family receptor alpha 4, humanhuman

TSL 1 (best)

Gene GFRA4, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-203ENST00000477160 MAGI2Q86UL8 1455 aa39.68■■■■□ 3.94
GFRA4-203ENST00000477160 ARHGAP5Q13017 1502 aa39.66■■■■□ 3.94
GFRA4-203ENST00000477160 ARID4BQ4LE39 1312 aaPredicted RBP39.65■■■■□ 3.94
GFRA4-203ENST00000477160 ZFYVE16Q7Z3T8 1539 aa39.62■■■■□ 3.93
GFRA4-203ENST00000477160 CEP162Q5TB80 1403 aa39.6■■■■□ 3.93
GFRA4-203ENST00000477160 ADAMTSL3P82987 1691 aa39.58■■■■□ 3.93
GFRA4-203ENST00000477160 YEATS2Q9ULM3 1422 aa39.57■■■■□ 3.93
GFRA4-203ENST00000477160 BCORL1Q5H9F3 1711 aa39.54■■■■□ 3.92
GFRA4-203ENST00000477160 ZNF518AQ6AHZ1 1483 aa39.54■■■■□ 3.92
GFRA4-203ENST00000477160 PREX2Q70Z35 1606 aa39.53■■■■□ 3.92
GFRA4-203ENST00000477160 CDC42BPBQ9Y5S2 1711 aa39.52■■■■□ 3.92
GFRA4-203ENST00000477160 PTPRMP28827 1452 aa39.48■■■■□ 3.91
GFRA4-203ENST00000477160 AFAP1Q8N556 730 aa39.46■■■■□ 3.91
GFRA4-203ENST00000477160 KDM5CP41229 1560 aa39.44■■■■□ 3.9
GFRA4-203ENST00000477160 ATP10AO60312 1499 aa39.43■■■■□ 3.9
GFRA4-203ENST00000477160 MTUS2Q5JR59 1369 aa39.42■■■■□ 3.9
GFRA4-203ENST00000477160 MADDQ8WXG6 1647 aa39.41■■■■□ 3.9
GFRA4-203ENST00000477160 ABCC1P33527 1531 aa39.4■■■■□ 3.9
GFRA4-203ENST00000477160 CDC42BPAQ5VT25 1732 aa39.4■■■■□ 3.9
GFRA4-203ENST00000477160 HECW2Q9P2P5 1572 aa39.4■■■■□ 3.9
GFRA4-203ENST00000477160 C9orf84Q5VXU9 1444 aa39.4■■■■□ 3.9
GFRA4-203ENST00000477160 LOC105371045A0A1W2PR82 267 aa39.39■■■■□ 3.9
GFRA4-203ENST00000477160 GPATCH8Q9UKJ3 1502 aaKnown RBP39.38■■■■□ 3.89
GFRA4-203ENST00000477160 ARHGEF12Q9NZN5 1544 aa39.35■■■■□ 3.89
GFRA4-203ENST00000477160 SIGLEC1Q9BZZ2 1709 aa39.34■■■■□ 3.89
GFRA4-203ENST00000477160 TRAPPC8Q9Y2L5 1435 aa39.33■■■■□ 3.89
GFRA4-203ENST00000477160 MLH3Q9UHC1 1453 aa39.33■■■■□ 3.89
GFRA4-203ENST00000477160 MYT1LQ9UL68 1186 aa39.33■■■■□ 3.89
GFRA4-203ENST00000477160 CCNB3Q8WWL7 1395 aa39.32■■■■□ 3.88
GFRA4-203ENST00000477160 ITSN2Q9NZM3 1697 aa39.3■■■■□ 3.88
GFRA4-203ENST00000477160 ZNF777Q9ULD5 760 aaPredicted RBP39.3■■■■□ 3.88
GFRA4-203ENST00000477160 EHBP1L1Q8N3D4 1523 aa39.29■■■■□ 3.88
GFRA4-203ENST00000477160 CFDP1Q9UEE9 299 aaPredicted RBP39.28■■■■□ 3.88
GFRA4-203ENST00000477160 MLECQ14165 292 aa39.27■■■■□ 3.88
GFRA4-203ENST00000477160 RIMS1Q86UR5 1692 aaKnown RBP39.25■■■■□ 3.87
GFRA4-203ENST00000477160 SAMD9LQ8IVG5 1584 aa39.25■■■■□ 3.87
GFRA4-203ENST00000477160 DIP2CQ9Y2E4 1556 aa39.24■■■■□ 3.87
GFRA4-203ENST00000477160 PLEKHH2Q8IVE3 1493 aa39.22■■■■□ 3.87
GFRA4-203ENST00000477160 REREQ9P2R6 1566 aa39.21■■■■□ 3.87
GFRA4-203ENST00000477160 KIAA1107Q9UPP5 1409 aa39.21■■■■□ 3.87
GFRA4-203ENST00000477160 VPS8Q8N3P4 1428 aa39.2■■■■□ 3.87
GFRA4-203ENST00000477160 SYCP2Q9BX26 1530 aa39.19■■■■□ 3.86
GFRA4-203ENST00000477160 ABCA6Q8N139 1617 aa39.17■■■■□ 3.86
GFRA4-203ENST00000477160 HNRNPMP52272 730 aaKnown RBP eCLIP39.15■■■■□ 3.86
GFRA4-203ENST00000477160 TIAM1Q13009 1591 aa39.14■■■■□ 3.86
GFRA4-203ENST00000477160 FER1L4A9Z1Z3 1794 aa39.13■■■■□ 3.85
GFRA4-203ENST00000477160 KIDINS220Q9ULH0 1771 aa39.11■■■■□ 3.85
GFRA4-203ENST00000477160 SPAG9O60271 1321 aaKnown RBP39.11■■■■□ 3.85
GFRA4-203ENST00000477160 AGLP35573 1532 aa39.09■■■■□ 3.85
GFRA4-203ENST00000477160 PLPPR3Q6T4P5 718 aa39.06■■■■□ 3.84
GFRA4-203ENST00000477160 NCOA2Q15596 1464 aa39.05■■■■□ 3.84
GFRA4-203ENST00000477160 SUPT6HQ7KZ85 1726 aaKnown RBP39.03■■■■□ 3.84
GFRA4-203ENST00000477160 LMTK3Q96Q04 1460 aa39.03■■■■□ 3.84
GFRA4-203ENST00000477160 ZNF644Q9H582 1327 aaPredicted RBP39.01■■■■□ 3.84
GFRA4-203ENST00000477160 ATP7AQ04656 1500 aa38.99■■■■□ 3.83
GFRA4-203ENST00000477160 MAP3K1Q13233 1512 aa38.97■■■■□ 3.83
GFRA4-203ENST00000477160 LRRC9Q6ZRR7 1453 aa38.97■■■■□ 3.83
GFRA4-203ENST00000477160 MBD5Q9P267 1494 aa38.96■■■■□ 3.83
GFRA4-203ENST00000477160 INO80Q9ULG1 1556 aaPredicted RBP38.95■■■■□ 3.83
GFRA4-203ENST00000477160 ESF1Q9H501 851 aaKnown RBP38.92■■■■□ 3.82
GFRA4-203ENST00000477160 CEBPAP49715 358 aaPredicted RBP38.9■■■■□ 3.82
GFRA4-203ENST00000477160 A2MP01023 1474 aa38.86■■■■□ 3.81
GFRA4-203ENST00000477160 RSPH4AQ5TD94 716 aa38.86■■■■□ 3.81
GFRA4-203ENST00000477160 RTEL1-TNFRSF6BF6WH68 1400 aa38.86■■■■□ 3.81
GFRA4-203ENST00000477160 CAMSAP2Q08AD1 1489 aa38.85■■■■□ 3.81
GFRA4-203ENST00000477160 CNTLNQ9NXG0 1405 aa38.84■■■■□ 3.81
GFRA4-203ENST00000477160 KANK4Q5T7N3 995 aaPredicted RBP38.83■■■■□ 3.81
GFRA4-203ENST00000477160 PLXNC1O60486 1568 aa38.82■■■■□ 3.81
GFRA4-203ENST00000477160 HSPA2P54652 639 aa38.81■■■■□ 3.8
GFRA4-203ENST00000477160 CCDC141Q6ZP82 1450 aa38.8■■■■□ 3.8
GFRA4-203ENST00000477160 APLP2Q06481 763 aa38.76■■■■□ 3.8
GFRA4-203ENST00000477160 ADGBQ8N7X0 1667 aa38.76■■■■□ 3.8
GFRA4-203ENST00000477160 PREX1Q8TCU6 1659 aa38.74■■■■□ 3.79
GFRA4-203ENST00000477160 C3P01024 1663 aa38.73■■■■□ 3.79
GFRA4-203ENST00000477160 ARHGEF5Q12774 1597 aa38.7■■■■□ 3.79
GFRA4-203ENST00000477160 UHRF1BP1Q6BDS2 1440 aa38.7■■■■□ 3.79
GFRA4-203ENST00000477160 DHX29Q7Z478 1369 aaKnown RBP38.69■■■■□ 3.78
GFRA4-203ENST00000477160 PPP6R1Q9UPN7 881 aa38.68■■■■□ 3.78
GFRA4-203ENST00000477160 MYOM3Q5VTT5 1437 aa38.68■■■■□ 3.78
GFRA4-203ENST00000477160 MIA2Q96PC5 1412 aa38.68■■■■□ 3.78
GFRA4-203ENST00000477160 SETD1BQ9UPS6 1966 aaKnown RBP38.68■■■■□ 3.78
GFRA4-203ENST00000477160 TSPY4P0CV99 314 aa38.67■■■■□ 3.78
GFRA4-203ENST00000477160 TSPY10P0CW01 314 aa38.67■■■■□ 3.78
GFRA4-203ENST00000477160 GGT6Q6P531 493 aa38.66■■■■□ 3.78
GFRA4-203ENST00000477160 MROH2AA6NES4 1674 aa38.65■■■■□ 3.78
GFRA4-203ENST00000477160 ZMYM3Q14202 1370 aa38.65■■■■□ 3.78
GFRA4-203ENST00000477160 ILDR1Q86SU0 546 aaPredicted RBP38.61■■■■□ 3.77
GFRA4-203ENST00000477160 NPATQ14207 1427 aa38.6■■■■□ 3.77
GFRA4-203ENST00000477160 CLTCQ00610 1675 aaKnown RBP38.54■■■■□ 3.76
GFRA4-203ENST00000477160 KIF3BO15066 747 aa38.53■■■■□ 3.76
GFRA4-203ENST00000477160 MAST1Q9Y2H9 1570 aa38.51■■■■□ 3.76
GFRA4-203ENST00000477160 DMRT2Q9Y5R5 561 aa38.46■■■■□ 3.75
GFRA4-203ENST00000477160 PTPRKQ15262 1439 aa38.45■■■■□ 3.75
GFRA4-203ENST00000477160 FAM135AQ9P2D6 1515 aa38.44■■■■□ 3.74
GFRA4-203ENST00000477160 PTPN23Q9H3S7 1636 aa38.38■■■■□ 3.74
GFRA4-203ENST00000477160 KDM5DQ9BY66 1539 aa38.38■■■■□ 3.73
GFRA4-203ENST00000477160 FGD6Q6ZV73 1430 aa38.38■■■■□ 3.73
GFRA4-203ENST00000477160 STRCQ7RTU9 1775 aa38.37■■■■□ 3.73
GFRA4-203ENST00000477160 WASHC2CQ9Y4E1 1318 aa38.37■■■■□ 3.73
GFRA4-203ENST00000477160 FBXO41Q8TF61 875 aa38.35■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms