RNA–Protein interactions for RNA: ENST00000477012.5

RNF7-203, Transcript of ring finger protein 7, humanhuman

TSL 1 (best)

Gene RNF7, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-203ENST00000477012 POGZQ7Z3K3 1410 aa26.86■■□□□ 1.89
RNF7-203ENST00000477012 ILDR1Q86SU0 546 aaPredicted RBP26.86■■□□□ 1.89
RNF7-203ENST00000477012 MAGI2Q86UL8 1455 aa26.85■■□□□ 1.89
RNF7-203ENST00000477012 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
RNF7-203ENST00000477012 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
RNF7-203ENST00000477012 PCF11O94913 1555 aaKnown RBP26.81■■□□□ 1.88
RNF7-203ENST00000477012 CDK11AQ9UQ88 783 aaPredicted RBP26.81■■□□□ 1.88
RNF7-203ENST00000477012 CLIP1P30622 1438 aa26.76■■□□□ 1.87
RNF7-203ENST00000477012 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.87
RNF7-203ENST00000477012 CDC42BPBQ9Y5S2 1711 aa26.76■■□□□ 1.87
RNF7-203ENST00000477012 ARHGAP5Q13017 1502 aa26.75■■□□□ 1.87
RNF7-203ENST00000477012 EFCAB2Q5VUJ9 269 aa26.75■■□□□ 1.87
RNF7-203ENST00000477012 LMTK3Q96Q04 1460 aa26.74■■□□□ 1.87
RNF7-203ENST00000477012 CASKIN1Q8WXD9 1431 aa26.74■■□□□ 1.87
RNF7-203ENST00000477012 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
RNF7-203ENST00000477012 PREX2Q70Z35 1606 aa26.72■■□□□ 1.87
RNF7-203ENST00000477012 KDM5CP41229 1560 aa26.71■■□□□ 1.87
RNF7-203ENST00000477012 ZNF518AQ6AHZ1 1483 aa26.7■■□□□ 1.87
RNF7-203ENST00000477012 ATP10AO60312 1499 aa26.69■■□□□ 1.86
RNF7-203ENST00000477012 C9orf84Q5VXU9 1444 aa26.69■■□□□ 1.86
RNF7-203ENST00000477012 ARHGEF12Q9NZN5 1544 aa26.66■■□□□ 1.86
RNF7-203ENST00000477012 CDC42BPAQ5VT25 1732 aa26.65■■□□□ 1.86
RNF7-203ENST00000477012 FYCO1Q9BQS8 1478 aa26.65■■□□□ 1.86
RNF7-203ENST00000477012 MLECQ14165 292 aa26.64■■□□□ 1.86
RNF7-203ENST00000477012 ITSN2Q9NZM3 1697 aa26.63■■□□□ 1.85
RNF7-203ENST00000477012 ABCC1P33527 1531 aa26.63■■□□□ 1.85
RNF7-203ENST00000477012 DIP2CQ9Y2E4 1556 aa26.63■■□□□ 1.85
RNF7-203ENST00000477012 AFAP1Q8N556 730 aa26.6■■□□□ 1.85
RNF7-203ENST00000477012 ABCA6Q8N139 1617 aa26.6■■□□□ 1.85
RNF7-203ENST00000477012 PLPPR3Q6T4P5 718 aa26.59■■□□□ 1.85
RNF7-203ENST00000477012 REREQ9P2R6 1566 aa26.58■■□□□ 1.85
RNF7-203ENST00000477012 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
RNF7-203ENST00000477012 TRAPPC8Q9Y2L5 1435 aa26.55■■□□□ 1.84
RNF7-203ENST00000477012 HSPA2P54652 639 aa26.53■■□□□ 1.84
RNF7-203ENST00000477012 PREX1Q8TCU6 1659 aa26.53■■□□□ 1.84
RNF7-203ENST00000477012 KIDINS220Q9ULH0 1771 aa26.52■■□□□ 1.84
RNF7-203ENST00000477012 SAMD9LQ8IVG5 1584 aa26.5■■□□□ 1.83
RNF7-203ENST00000477012 MYT1LQ9UL68 1186 aa26.48■■□□□ 1.83
RNF7-203ENST00000477012 AGLP35573 1532 aa26.46■■□□□ 1.83
RNF7-203ENST00000477012 GPATCH8Q9UKJ3 1502 aaKnown RBP26.45■■□□□ 1.83
RNF7-203ENST00000477012 SYCP2Q9BX26 1530 aa26.44■■□□□ 1.82
RNF7-203ENST00000477012 FBXO41Q8TF61 875 aa26.44■■□□□ 1.82
RNF7-203ENST00000477012 CEBPAP49715 358 aaPredicted RBP26.43■■□□□ 1.82
RNF7-203ENST00000477012 C3P01024 1663 aa26.43■■□□□ 1.82
RNF7-203ENST00000477012 SETD1BQ9UPS6 1966 aaKnown RBP26.4■■□□□ 1.82
RNF7-203ENST00000477012 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
RNF7-203ENST00000477012 INO80Q9ULG1 1556 aaPredicted RBP26.35■■□□□ 1.81
RNF7-203ENST00000477012 STRCQ7RTU9 1775 aa26.34■■□□□ 1.81
RNF7-203ENST00000477012 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.81
RNF7-203ENST00000477012 UHRF1BP1Q6BDS2 1440 aa26.33■■□□□ 1.81
RNF7-203ENST00000477012 SUPT6HQ7KZ85 1726 aaKnown RBP26.33■■□□□ 1.81
RNF7-203ENST00000477012 ATP7AQ04656 1500 aa26.33■■□□□ 1.81
RNF7-203ENST00000477012 TIAM1Q13009 1591 aa26.33■■□□□ 1.8
RNF7-203ENST00000477012 KIAA1107Q9UPP5 1409 aa26.32■■□□□ 1.8
RNF7-203ENST00000477012 PLEKHH2Q8IVE3 1493 aa26.32■■□□□ 1.8
RNF7-203ENST00000477012 EHBP1L1Q8N3D4 1523 aa26.32■■□□□ 1.8
RNF7-203ENST00000477012 CCNB3Q8WWL7 1395 aa26.32■■□□□ 1.8
RNF7-203ENST00000477012 HNRNPMP52272 730 aaKnown RBP eCLIP26.3■■□□□ 1.8
RNF7-203ENST00000477012 CEP162Q5TB80 1403 aa26.3■■□□□ 1.8
RNF7-203ENST00000477012 PLXNC1O60486 1568 aa26.29■■□□□ 1.8
RNF7-203ENST00000477012 MROH2AA6NES4 1674 aa26.29■■□□□ 1.8
RNF7-203ENST00000477012 CFDP1Q9UEE9 299 aaPredicted RBP26.29■■□□□ 1.8
RNF7-203ENST00000477012 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
RNF7-203ENST00000477012 CNTLNQ9NXG0 1405 aa26.27■■□□□ 1.8
RNF7-203ENST00000477012 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
RNF7-203ENST00000477012 ADGBQ8N7X0 1667 aa26.22■■□□□ 1.79
RNF7-203ENST00000477012 CLTCQ00610 1675 aaKnown RBP26.22■■□□□ 1.79
RNF7-203ENST00000477012 A2MP01023 1474 aa26.21■■□□□ 1.79
RNF7-203ENST00000477012 CERKQ8TCT0 537 aa26.19■■□□□ 1.78
RNF7-203ENST00000477012 MBD5Q9P267 1494 aa26.18■■□□□ 1.78
RNF7-203ENST00000477012 ZNF644Q9H582 1327 aaPredicted RBP26.17■■□□□ 1.78
RNF7-203ENST00000477012 NPATQ14207 1427 aa26.15■■□□□ 1.78
RNF7-203ENST00000477012 DMRT2Q9Y5R5 561 aa26.14■■□□□ 1.78
RNF7-203ENST00000477012 NCOA2Q15596 1464 aa26.13■■□□□ 1.77
RNF7-203ENST00000477012 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
RNF7-203ENST00000477012 PTPRTO14522 1441 aa26.11■■□□□ 1.77
RNF7-203ENST00000477012 MYO3AQ8NEV4 1616 aa26.1■■□□□ 1.77
RNF7-203ENST00000477012 ZNF142P52746 1687 aaPredicted RBP26.1■■□□□ 1.77
RNF7-203ENST00000477012 RTEL1-TNFRSF6BF6WH68 1400 aa26.1■■□□□ 1.77
RNF7-203ENST00000477012 NCOA1Q15788 1441 aa26.1■■□□□ 1.77
RNF7-203ENST00000477012 CAMSAP2Q08AD1 1489 aa26.09■■□□□ 1.77
RNF7-203ENST00000477012 CAMSAP1Q5T5Y3 1602 aa26.07■■□□□ 1.76
RNF7-203ENST00000477012 CCDC141Q6ZP82 1450 aa26.07■■□□□ 1.76
RNF7-203ENST00000477012 GGT6Q6P531 493 aa26.05■■□□□ 1.76
RNF7-203ENST00000477012 PTPRKQ15262 1439 aa26.05■■□□□ 1.76
RNF7-203ENST00000477012 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
RNF7-203ENST00000477012 CEP170BQ9Y4F5 1589 aaPredicted RBP26.03■■□□□ 1.76
RNF7-203ENST00000477012 ARHGEF5Q12774 1597 aa26.01■■□□□ 1.75
RNF7-203ENST00000477012 DHX29Q7Z478 1369 aaKnown RBP26.01■■□□□ 1.75
RNF7-203ENST00000477012 LTBP4Q8N2S1 1624 aa26■■□□□ 1.75
RNF7-203ENST00000477012 LRRC9Q6ZRR7 1453 aa25.99■■□□□ 1.75
RNF7-203ENST00000477012 PPP6R1Q9UPN7 881 aa25.99■■□□□ 1.75
RNF7-203ENST00000477012 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
RNF7-203ENST00000477012 PLA2R1Q13018 1463 aa25.95■■□□□ 1.74
RNF7-203ENST00000477012 FAM135AQ9P2D6 1515 aa25.94■■□□□ 1.74
RNF7-203ENST00000477012 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
RNF7-203ENST00000477012 RSPH4AQ5TD94 716 aa25.93■■□□□ 1.74
RNF7-203ENST00000477012 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
RNF7-203ENST00000477012 TCOF1Q13428 1488 aaKnown RBP25.91■■□□□ 1.74
RNF7-203ENST00000477012 NCKAP5LQ9HCH0 1330 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms