RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 BCANQ96GW7 911 aa11.46□□□□□ -0.58
CNTNAP3B-205ENST00000476961 CARMIL2Q6F5E8 1435 aa11.46□□□□□ -0.58
CNTNAP3B-205ENST00000476961 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
CNTNAP3B-205ENST00000476961 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
CNTNAP3B-205ENST00000476961 PRG4Q92954 1404 aaPredicted RBP11.45□□□□□ -0.58
CNTNAP3B-205ENST00000476961 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
CNTNAP3B-205ENST00000476961 NAP1L5Q96NT1 182 aaPredicted RBP11.44□□□□□ -0.58
CNTNAP3B-205ENST00000476961 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
CNTNAP3B-205ENST00000476961 SHROOM2Q13796 1616 aa11.44□□□□□ -0.58
CNTNAP3B-205ENST00000476961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
CNTNAP3B-205ENST00000476961 CFAP43Q8NDM7 1665 aa11.42□□□□□ -0.58
CNTNAP3B-205ENST00000476961 LRRC9Q6ZRR7 1453 aa11.41□□□□□ -0.58
CNTNAP3B-205ENST00000476961 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
CNTNAP3B-205ENST00000476961 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
CNTNAP3B-205ENST00000476961 ERCC6L2Q5T890 1561 aa11.39□□□□□ -0.59
CNTNAP3B-205ENST00000476961 HAP1P54257 671 aaPredicted RBP11.39□□□□□ -0.59
CNTNAP3B-205ENST00000476961 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
CNTNAP3B-205ENST00000476961 PLB1Q6P1J6 1458 aa11.38□□□□□ -0.59
CNTNAP3B-205ENST00000476961 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
CNTNAP3B-205ENST00000476961 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
CNTNAP3B-205ENST00000476961 NUP153P49790 1475 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-205ENST00000476961 FKBP8Q14318 412 aa11.37□□□□□ -0.59
CNTNAP3B-205ENST00000476961 CCDC18Q5T9S5 1454 aa11.37□□□□□ -0.59
CNTNAP3B-205ENST00000476961 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
CNTNAP3B-205ENST00000476961 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
CNTNAP3B-205ENST00000476961 PTPRGP23470 1445 aa11.36□□□□□ -0.59
CNTNAP3B-205ENST00000476961 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
CNTNAP3B-205ENST00000476961 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
CNTNAP3B-205ENST00000476961 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
CNTNAP3B-205ENST00000476961 ABCA8O94911 1581 aa11.35□□□□□ -0.59
CNTNAP3B-205ENST00000476961 RRP9O43818 475 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-205ENST00000476961 CHMP4BQ9H444 224 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-205ENST00000476961 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
CNTNAP3B-205ENST00000476961 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
CNTNAP3B-205ENST00000476961 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
CNTNAP3B-205ENST00000476961 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
CNTNAP3B-205ENST00000476961 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
CNTNAP3B-205ENST00000476961 PHLDB1Q86UU1 1377 aa11.32□□□□□ -0.6
CNTNAP3B-205ENST00000476961 HSP90AA2PQ14568 343 aaPredicted RBP11.32□□□□□ -0.6
CNTNAP3B-205ENST00000476961 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
CNTNAP3B-205ENST00000476961 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
CNTNAP3B-205ENST00000476961 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-205ENST00000476961 PRDM4Q9UKN5 801 aa11.31□□□□□ -0.6
CNTNAP3B-205ENST00000476961 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-205ENST00000476961 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
CNTNAP3B-205ENST00000476961 UACAQ9BZF9 1416 aa11.3□□□□□ -0.6
CNTNAP3B-205ENST00000476961 ITGAEP38570 1179 aa11.3□□□□□ -0.6
CNTNAP3B-205ENST00000476961 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
CNTNAP3B-205ENST00000476961 ATP10BO94823 1461 aa11.29□□□□□ -0.6
CNTNAP3B-205ENST00000476961 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
CNTNAP3B-205ENST00000476961 PAK3O75914 559 aaPredicted RBP11.28□□□□□ -0.6
CNTNAP3B-205ENST00000476961 HNRNPUL2Q1KMD3 747 aaKnown RBP11.28□□□□□ -0.6
CNTNAP3B-205ENST00000476961 CCNB3Q8WWL7 1395 aa11.28□□□□□ -0.6
CNTNAP3B-205ENST00000476961 ARHGEF11O15085 1522 aa11.27□□□□□ -0.6
CNTNAP3B-205ENST00000476961 FAM43AQ8N2R8 423 aa11.26□□□□□ -0.61
CNTNAP3B-205ENST00000476961 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
CNTNAP3B-205ENST00000476961 ABCC2Q92887 1545 aa11.26□□□□□ -0.61
CNTNAP3B-205ENST00000476961 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
CNTNAP3B-205ENST00000476961 CDK11AQ9UQ88 783 aaPredicted RBP11.25□□□□□ -0.61
CNTNAP3B-205ENST00000476961 TROQ12816 1431 aaPredicted RBP11.25□□□□□ -0.61
CNTNAP3B-205ENST00000476961 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
CNTNAP3B-205ENST00000476961 STAC3Q96MF2 364 aa11.23□□□□□ -0.61
CNTNAP3B-205ENST00000476961 BCCIPQ9P287 314 aaKnown RBP eCLIP11.23□□□□□ -0.61
CNTNAP3B-205ENST00000476961 MYOM3Q5VTT5 1437 aa11.23□□□□□ -0.61
CNTNAP3B-205ENST00000476961 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-205ENST00000476961 FGD6Q6ZV73 1430 aa11.23□□□□□ -0.61
CNTNAP3B-205ENST00000476961 PLEKHD1A6NEE1 506 aa11.22□□□□□ -0.61
CNTNAP3B-205ENST00000476961 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-205ENST00000476961 AMER1Q5JTC6 1135 aaPredicted RBP11.21□□□□□ -0.61
CNTNAP3B-205ENST00000476961 FAM50AQ14320 339 aaKnown RBP11.21□□□□□ -0.62
CNTNAP3B-205ENST00000476961 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
CNTNAP3B-205ENST00000476961 TEX2Q8IWB9 1127 aa11.2□□□□□ -0.62
CNTNAP3B-205ENST00000476961 KDM5BQ9UGL1 1544 aa11.2□□□□□ -0.62
CNTNAP3B-205ENST00000476961 KIF14Q15058 1648 aa11.2□□□□□ -0.62
CNTNAP3B-205ENST00000476961 ADCY10Q96PN6 1610 aa11.19□□□□□ -0.62
CNTNAP3B-205ENST00000476961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.19□□□□□ -0.62
CNTNAP3B-205ENST00000476961 RGS3P49796 1198 aa11.19□□□□□ -0.62
CNTNAP3B-205ENST00000476961 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
CNTNAP3B-205ENST00000476961 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
CNTNAP3B-205ENST00000476961 IRX6P78412 446 aaPredicted RBP11.18□□□□□ -0.62
CNTNAP3B-205ENST00000476961 ZCCHC11Q5TAX3 1644 aaKnown RBP11.17□□□□□ -0.62
CNTNAP3B-205ENST00000476961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
CNTNAP3B-205ENST00000476961 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
CNTNAP3B-205ENST00000476961 SECISBP2LQ93073 1101 aaKnown RBP11.17□□□□□ -0.62
CNTNAP3B-205ENST00000476961 MIA2Q96PC5 1412 aa11.17□□□□□ -0.62
CNTNAP3B-205ENST00000476961 NEFMP07197 916 aa11.17□□□□□ -0.62
CNTNAP3B-205ENST00000476961 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
CNTNAP3B-205ENST00000476961 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
CNTNAP3B-205ENST00000476961 HSP90AA1P07900 732 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-205ENST00000476961 TCOF1Q13428 1488 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-205ENST00000476961 GPATCH8Q9UKJ3 1502 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-205ENST00000476961 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
CNTNAP3B-205ENST00000476961 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-205ENST00000476961 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
CNTNAP3B-205ENST00000476961 FOXD1Q16676 465 aa11.14□□□□□ -0.63
CNTNAP3B-205ENST00000476961 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-205ENST00000476961 PTPRKQ15262 1439 aa11.13□□□□□ -0.63
CNTNAP3B-205ENST00000476961 ZNF644Q9H582 1327 aaPredicted RBP11.12□□□□□ -0.63
CNTNAP3B-205ENST00000476961 CFDP1Q9UEE9 299 aaPredicted RBP11.12□□□□□ -0.63
CNTNAP3B-205ENST00000476961 RIMBP3CA6NJZ7 1639 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms