RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 AKNAQ7Z591 1439 aa19.83■□□□□ 0.76
APTX-220ENST00000476858 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
APTX-220ENST00000476858 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
APTX-220ENST00000476858 CDC42BPAQ5VT25 1732 aa19.8■□□□□ 0.76
APTX-220ENST00000476858 KANK4Q5T7N3 995 aaPredicted RBP19.79■□□□□ 0.76
APTX-220ENST00000476858 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
APTX-220ENST00000476858 PREX2Q70Z35 1606 aa19.79■□□□□ 0.76
APTX-220ENST00000476858 ARHGAP5Q13017 1502 aa19.78■□□□□ 0.76
APTX-220ENST00000476858 EHBP1L1Q8N3D4 1523 aa19.76■□□□□ 0.75
APTX-220ENST00000476858 GPATCH8Q9UKJ3 1502 aaKnown RBP19.76■□□□□ 0.75
APTX-220ENST00000476858 RICTORQ6R327 1708 aa19.76■□□□□ 0.75
APTX-220ENST00000476858 CFAP74Q9C0B2 1584 aa19.75■□□□□ 0.75
APTX-220ENST00000476858 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
APTX-220ENST00000476858 PHLDB1Q86UU1 1377 aa19.75■□□□□ 0.75
APTX-220ENST00000476858 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
APTX-220ENST00000476858 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
APTX-220ENST00000476858 EFCAB2Q5VUJ9 269 aa19.74■□□□□ 0.75
APTX-220ENST00000476858 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
APTX-220ENST00000476858 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
APTX-220ENST00000476858 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
APTX-220ENST00000476858 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
APTX-220ENST00000476858 POGZQ7Z3K3 1410 aa19.69■□□□□ 0.74
APTX-220ENST00000476858 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
APTX-220ENST00000476858 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
APTX-220ENST00000476858 ABCC1P33527 1531 aa19.68■□□□□ 0.74
APTX-220ENST00000476858 ZNF777Q9ULD5 760 aaPredicted RBP19.68■□□□□ 0.74
APTX-220ENST00000476858 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
APTX-220ENST00000476858 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
APTX-220ENST00000476858 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
APTX-220ENST00000476858 KDM4FA0A1W2PPD8 638 aa19.67■□□□□ 0.74
APTX-220ENST00000476858 AFAP1Q8N556 730 aa19.67■□□□□ 0.74
APTX-220ENST00000476858 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
APTX-220ENST00000476858 SIGLEC1Q9BZZ2 1709 aa19.66■□□□□ 0.74
APTX-220ENST00000476858 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
APTX-220ENST00000476858 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
APTX-220ENST00000476858 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
APTX-220ENST00000476858 SYCP2Q9BX26 1530 aa19.63■□□□□ 0.73
APTX-220ENST00000476858 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
APTX-220ENST00000476858 ARHGEF40Q8TER5 1519 aa19.62■□□□□ 0.73
APTX-220ENST00000476858 HNRNPMP52272 730 aaKnown RBP eCLIP19.62■□□□□ 0.73
APTX-220ENST00000476858 KDM5CP41229 1560 aa19.61■□□□□ 0.73
APTX-220ENST00000476858 ZFYVE16Q7Z3T8 1539 aa19.6■□□□□ 0.73
APTX-220ENST00000476858 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
APTX-220ENST00000476858 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
APTX-220ENST00000476858 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
APTX-220ENST00000476858 ABCA6Q8N139 1617 aa19.54■□□□□ 0.72
APTX-220ENST00000476858 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
APTX-220ENST00000476858 HECW2Q9P2P5 1572 aa19.54■□□□□ 0.72
APTX-220ENST00000476858 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
APTX-220ENST00000476858 KIDINS220Q9ULH0 1771 aa19.53■□□□□ 0.72
APTX-220ENST00000476858 APLP2Q06481 763 aa19.53■□□□□ 0.72
APTX-220ENST00000476858 MAGI2Q86UL8 1455 aa19.53■□□□□ 0.72
APTX-220ENST00000476858 KIAA1107Q9UPP5 1409 aa19.52■□□□□ 0.72
APTX-220ENST00000476858 MYOM3Q5VTT5 1437 aa19.51■□□□□ 0.71
APTX-220ENST00000476858 MLH3Q9UHC1 1453 aa19.51■□□□□ 0.71
APTX-220ENST00000476858 ATP10AO60312 1499 aa19.49■□□□□ 0.71
APTX-220ENST00000476858 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
APTX-220ENST00000476858 INO80Q9ULG1 1556 aaPredicted RBP19.48■□□□□ 0.71
APTX-220ENST00000476858 ARID4BQ4LE39 1312 aaPredicted RBP19.48■□□□□ 0.71
APTX-220ENST00000476858 MYT1LQ9UL68 1186 aa19.47■□□□□ 0.71
APTX-220ENST00000476858 BCORL1Q5H9F3 1711 aa19.47■□□□□ 0.71
APTX-220ENST00000476858 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
APTX-220ENST00000476858 SPAG9O60271 1321 aaKnown RBP19.46■□□□□ 0.71
APTX-220ENST00000476858 C9orf84Q5VXU9 1444 aa19.45■□□□□ 0.7
APTX-220ENST00000476858 MLECQ14165 292 aa19.45■□□□□ 0.7
APTX-220ENST00000476858 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
APTX-220ENST00000476858 ATP7AQ04656 1500 aa19.45■□□□□ 0.7
APTX-220ENST00000476858 MADDQ8WXG6 1647 aa19.43■□□□□ 0.7
APTX-220ENST00000476858 PTPN23Q9H3S7 1636 aa19.42■□□□□ 0.7
APTX-220ENST00000476858 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
APTX-220ENST00000476858 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
APTX-220ENST00000476858 CCDC141Q6ZP82 1450 aa19.41■□□□□ 0.7
APTX-220ENST00000476858 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
APTX-220ENST00000476858 REREQ9P2R6 1566 aa19.39■□□□□ 0.69
APTX-220ENST00000476858 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
APTX-220ENST00000476858 RIMS1Q86UR5 1692 aaKnown RBP19.36■□□□□ 0.69
APTX-220ENST00000476858 ADGBQ8N7X0 1667 aa19.36■□□□□ 0.69
APTX-220ENST00000476858 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
APTX-220ENST00000476858 PTPRMP28827 1452 aa19.35■□□□□ 0.69
APTX-220ENST00000476858 ABCC5O15440 1437 aa19.34■□□□□ 0.69
APTX-220ENST00000476858 A2MP01023 1474 aa19.34■□□□□ 0.69
APTX-220ENST00000476858 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
APTX-220ENST00000476858 SCAF1Q9H7N4 1312 aaKnown RBP19.33■□□□□ 0.69
APTX-220ENST00000476858 AGLP35573 1532 aa19.33■□□□□ 0.68
APTX-220ENST00000476858 CROCC2H7BZ55 1655 aa19.31■□□□□ 0.68
APTX-220ENST00000476858 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
APTX-220ENST00000476858 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
APTX-220ENST00000476858 DNMT1P26358 1616 aaKnown RBP19.3■□□□□ 0.68
APTX-220ENST00000476858 DAPK1P53355 1430 aa19.3■□□□□ 0.68
APTX-220ENST00000476858 FAM50AQ14320 339 aaKnown RBP19.29■□□□□ 0.68
APTX-220ENST00000476858 PTPRKQ15262 1439 aa19.27■□□□□ 0.68
APTX-220ENST00000476858 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
APTX-220ENST00000476858 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
APTX-220ENST00000476858 CHIC2Q9UKJ5 165 aa19.27■□□□□ 0.68
APTX-220ENST00000476858 DHX29Q7Z478 1369 aaKnown RBP19.27■□□□□ 0.68
APTX-220ENST00000476858 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
APTX-220ENST00000476858 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
APTX-220ENST00000476858 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
APTX-220ENST00000476858 GGT6Q6P531 493 aa19.22■□□□□ 0.67
APTX-220ENST00000476858 RRP7BPQ9NSQ0 103 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms