RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
DFFA-203ENST00000476658 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
DFFA-203ENST00000476658 RICTORQ6R327 1708 aa23.73■■□□□ 1.39
DFFA-203ENST00000476658 FRMPD1Q5SYB0 1578 aa23.73■■□□□ 1.39
DFFA-203ENST00000476658 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
DFFA-203ENST00000476658 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.38
DFFA-203ENST00000476658 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
DFFA-203ENST00000476658 MAP3K1Q13233 1512 aa23.69■■□□□ 1.38
DFFA-203ENST00000476658 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
DFFA-203ENST00000476658 APLP2Q06481 763 aa23.68■■□□□ 1.38
DFFA-203ENST00000476658 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
DFFA-203ENST00000476658 ITSN2Q9NZM3 1697 aa23.65■■□□□ 1.38
DFFA-203ENST00000476658 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.37
DFFA-203ENST00000476658 POGZQ7Z3K3 1410 aa23.64■■□□□ 1.37
DFFA-203ENST00000476658 NCOA2Q15596 1464 aa23.63■■□□□ 1.37
DFFA-203ENST00000476658 KANK4Q5T7N3 995 aaPredicted RBP23.62■■□□□ 1.37
DFFA-203ENST00000476658 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
DFFA-203ENST00000476658 ABCC1P33527 1531 aa23.62■■□□□ 1.37
DFFA-203ENST00000476658 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
DFFA-203ENST00000476658 SAMD9LQ8IVG5 1584 aa23.61■■□□□ 1.37
DFFA-203ENST00000476658 ZNF518AQ6AHZ1 1483 aa23.59■■□□□ 1.37
DFFA-203ENST00000476658 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.36
DFFA-203ENST00000476658 ZFYVE16Q7Z3T8 1539 aa23.56■■□□□ 1.36
DFFA-203ENST00000476658 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
DFFA-203ENST00000476658 SYCP2Q9BX26 1530 aa23.55■■□□□ 1.36
DFFA-203ENST00000476658 AFAP1Q8N556 730 aa23.55■■□□□ 1.36
DFFA-203ENST00000476658 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
DFFA-203ENST00000476658 KDM5CP41229 1560 aa23.53■■□□□ 1.36
DFFA-203ENST00000476658 TRAPPC8Q9Y2L5 1435 aa23.53■■□□□ 1.36
DFFA-203ENST00000476658 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
DFFA-203ENST00000476658 MYT1LQ9UL68 1186 aa23.53■■□□□ 1.36
DFFA-203ENST00000476658 PLEKHH2Q8IVE3 1493 aa23.53■■□□□ 1.36
DFFA-203ENST00000476658 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
DFFA-203ENST00000476658 KDM4FA0A1W2PPD8 638 aa23.51■■□□□ 1.35
DFFA-203ENST00000476658 HECW2Q9P2P5 1572 aa23.51■■□□□ 1.35
DFFA-203ENST00000476658 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.35
DFFA-203ENST00000476658 ZNF644Q9H582 1327 aaPredicted RBP23.49■■□□□ 1.35
DFFA-203ENST00000476658 KIAA1107Q9UPP5 1409 aa23.49■■□□□ 1.35
DFFA-203ENST00000476658 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
DFFA-203ENST00000476658 CAMSAP2Q08AD1 1489 aa23.45■■□□□ 1.34
DFFA-203ENST00000476658 MLH3Q9UHC1 1453 aa23.45■■□□□ 1.34
DFFA-203ENST00000476658 MYOM3Q5VTT5 1437 aa23.44■■□□□ 1.34
DFFA-203ENST00000476658 ATP10AO60312 1499 aa23.43■■□□□ 1.34
DFFA-203ENST00000476658 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
DFFA-203ENST00000476658 ABCA6Q8N139 1617 aa23.42■■□□□ 1.34
DFFA-203ENST00000476658 DIP2CQ9Y2E4 1556 aa23.42■■□□□ 1.34
DFFA-203ENST00000476658 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
DFFA-203ENST00000476658 SPAG9O60271 1321 aaKnown RBP23.41■■□□□ 1.34
DFFA-203ENST00000476658 C9orf84Q5VXU9 1444 aa23.41■■□□□ 1.34
DFFA-203ENST00000476658 BCORL1Q5H9F3 1711 aa23.4■■□□□ 1.34
DFFA-203ENST00000476658 MBD5Q9P267 1494 aa23.39■■□□□ 1.34
DFFA-203ENST00000476658 MIA2Q96PC5 1412 aa23.39■■□□□ 1.33
DFFA-203ENST00000476658 ATP7AQ04656 1500 aa23.38■■□□□ 1.33
DFFA-203ENST00000476658 INO80Q9ULG1 1556 aaPredicted RBP23.37■■□□□ 1.33
DFFA-203ENST00000476658 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
DFFA-203ENST00000476658 ADAMTSL3P82987 1691 aa23.35■■□□□ 1.33
DFFA-203ENST00000476658 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
DFFA-203ENST00000476658 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.32
DFFA-203ENST00000476658 REREQ9P2R6 1566 aa23.32■■□□□ 1.32
DFFA-203ENST00000476658 MLECQ14165 292 aa23.32■■□□□ 1.32
DFFA-203ENST00000476658 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
DFFA-203ENST00000476658 MADDQ8WXG6 1647 aa23.31■■□□□ 1.32
DFFA-203ENST00000476658 FGD6Q6ZV73 1430 aa23.3■■□□□ 1.32
DFFA-203ENST00000476658 PPARGC1BQ86YN6 1023 aaKnown RBP23.28■■□□□ 1.32
DFFA-203ENST00000476658 ADGBQ8N7X0 1667 aa23.28■■□□□ 1.32
DFFA-203ENST00000476658 RTEL1-TNFRSF6BF6WH68 1400 aa23.27■■□□□ 1.32
DFFA-203ENST00000476658 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
DFFA-203ENST00000476658 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
DFFA-203ENST00000476658 RIMS1Q86UR5 1692 aaKnown RBP23.27■■□□□ 1.32
DFFA-203ENST00000476658 FER1L4A9Z1Z3 1794 aa23.27■■□□□ 1.32
DFFA-203ENST00000476658 AGLP35573 1532 aa23.25■■□□□ 1.31
DFFA-203ENST00000476658 A2MP01023 1474 aa23.24■■□□□ 1.31
DFFA-203ENST00000476658 TCOF1Q13428 1488 aaKnown RBP23.23■■□□□ 1.31
DFFA-203ENST00000476658 PTPRMP28827 1452 aa23.22■■□□□ 1.31
DFFA-203ENST00000476658 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
DFFA-203ENST00000476658 MAST1Q9Y2H9 1570 aa23.21■■□□□ 1.31
DFFA-203ENST00000476658 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
DFFA-203ENST00000476658 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
DFFA-203ENST00000476658 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
DFFA-203ENST00000476658 ABCC5O15440 1437 aa23.16■■□□□ 1.3
DFFA-203ENST00000476658 DAPK1P53355 1430 aa23.16■■□□□ 1.3
DFFA-203ENST00000476658 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
DFFA-203ENST00000476658 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.3
DFFA-203ENST00000476658 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.29
DFFA-203ENST00000476658 ESF1Q9H501 851 aaKnown RBP23.14■■□□□ 1.29
DFFA-203ENST00000476658 GGT6Q6P531 493 aa23.1■■□□□ 1.29
DFFA-203ENST00000476658 KIF3BO15066 747 aa23.08■■□□□ 1.29
DFFA-203ENST00000476658 CHIC2Q9UKJ5 165 aa23.08■■□□□ 1.29
DFFA-203ENST00000476658 CLTCQ00610 1675 aaKnown RBP23.06■■□□□ 1.28
DFFA-203ENST00000476658 KIF15Q9NS87 1388 aa23.05■■□□□ 1.28
DFFA-203ENST00000476658 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
DFFA-203ENST00000476658 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
DFFA-203ENST00000476658 C3P01024 1663 aa23.04■■□□□ 1.28
DFFA-203ENST00000476658 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
DFFA-203ENST00000476658 RRP7BPQ9NSQ0 103 aa23.04■■□□□ 1.28
DFFA-203ENST00000476658 ANKRD30AQ9BXX3 1397 aa23.03■■□□□ 1.28
DFFA-203ENST00000476658 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
DFFA-203ENST00000476658 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
DFFA-203ENST00000476658 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
DFFA-203ENST00000476658 ADGRL2O95490 1459 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms