RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 EIF5BO60841 1220 aaKnown RBP6.48□□□□□ -1.37
CD55-208ENST00000476590 ACIN1Q9UKV3 1341 aaKnown RBP6.47□□□□□ -1.37
CD55-208ENST00000476590 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
CD55-208ENST00000476590 NRG2O14511 850 aaPredicted RBP6.46□□□□□ -1.38
CD55-208ENST00000476590 INSM1Q01101 510 aaPredicted RBP6.46□□□□□ -1.38
CD55-208ENST00000476590 KCTD12Q96CX2 325 aaKnown RBP6.46□□□□□ -1.38
CD55-208ENST00000476590 G3V3G9 751 aa6.45□□□□□ -1.38
CD55-208ENST00000476590 ZBTB22O15209 634 aa6.45□□□□□ -1.38
CD55-208ENST00000476590 DCAF8Q5TAQ9 597 aa6.45□□□□□ -1.38
CD55-208ENST00000476590 HOMEZQ8IX15 550 aa6.45□□□□□ -1.38
CD55-208ENST00000476590 PLCB2Q00722 1185 aa6.44□□□□□ -1.38
CD55-208ENST00000476590 ANP32EQ9BTT0 268 aa6.44□□□□□ -1.38
CD55-208ENST00000476590 ZNF316A6NFI3 1004 aaPredicted RBP6.43□□□□□ -1.38
CD55-208ENST00000476590 KLHL34Q8N239 644 aa6.43□□□□□ -1.38
CD55-208ENST00000476590 ADGRD1Q6QNK2 874 aa6.42□□□□□ -1.38
CD55-208ENST00000476590 RANGAP1P46060 587 aaPredicted RBP6.41□□□□□ -1.38
CD55-208ENST00000476590 GPR153Q6NV75 609 aa6.41□□□□□ -1.38
CD55-208ENST00000476590 ANO8Q9HCE9 1232 aaPredicted RBP6.41□□□□□ -1.38
CD55-208ENST00000476590 HAP1P54257 671 aaPredicted RBP6.4□□□□□ -1.39
CD55-208ENST00000476590 STAC3Q96MF2 364 aa6.4□□□□□ -1.39
CD55-208ENST00000476590 GTF3C3Q9Y5Q9 886 aa6.4□□□□□ -1.39
CD55-208ENST00000476590 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
CD55-208ENST00000476590 KRTAP1-3Q8IUG1 177 aa6.37□□□□□ -1.39
CD55-208ENST00000476590 RASEFQ8IZ41 740 aa6.37□□□□□ -1.39
CD55-208ENST00000476590 PODXL2Q9NZ53 605 aa6.37□□□□□ -1.39
CD55-208ENST00000476590 MKRN3Q13064 507 aaKnown RBP6.37□□□□□ -1.39
CD55-208ENST00000476590 ZEB1P37275 1124 aaPredicted RBP6.36□□□□□ -1.39
CD55-208ENST00000476590 PTPN5P54829 565 aa6.36□□□□□ -1.39
CD55-208ENST00000476590 NEUROD1Q13562 356 aa6.36□□□□□ -1.39
CD55-208ENST00000476590 PCGF6Q9BYE7 350 aa6.36□□□□□ -1.39
CD55-208ENST00000476590 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
CD55-208ENST00000476590 TK2O00142 265 aa6.35□□□□□ -1.39
CD55-208ENST00000476590 GOLGA2Q08379 1002 aa6.34□□□□□ -1.39
CD55-208ENST00000476590 UBE2Q2Q8WVN8 375 aa6.34□□□□□ -1.39
CD55-208ENST00000476590 FAM181BA6NEQ2 426 aa6.33□□□□□ -1.4
CD55-208ENST00000476590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.33□□□□□ -1.41e-7■■■□□ 16.2
CD55-208ENST00000476590 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
CD55-208ENST00000476590 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
CD55-208ENST00000476590 HRO43593 1189 aa6.3□□□□□ -1.4
CD55-208ENST00000476590 BOLA1Q9Y3E2 137 aa6.3□□□□□ -1.4
CD55-208ENST00000476590 WIPF1O43516 503 aa6.28□□□□□ -1.4
CD55-208ENST00000476590 XP32Q5T750 250 aa6.28□□□□□ -1.4
CD55-208ENST00000476590 AXIN2Q9Y2T1 843 aa6.28□□□□□ -1.4
CD55-208ENST00000476590 PLEKHG5O94827 1062 aa6.27□□□□□ -1.41
CD55-208ENST00000476590 POTEEQ6S8J3 1075 aa6.27□□□□□ -1.41
CD55-208ENST00000476590 ARSIQ5FYB1 569 aa6.26□□□□□ -1.41
CD55-208ENST00000476590 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
CD55-208ENST00000476590 ARHGAP33O14559 1287 aa6.24□□□□□ -1.41
CD55-208ENST00000476590 FKBP8Q14318 412 aa6.24□□□□□ -1.41
CD55-208ENST00000476590 TMEM132AQ24JP5 1023 aa6.24□□□□□ -1.41
CD55-208ENST00000476590 WFS1O76024 890 aa6.23□□□□□ -1.41
CD55-208ENST00000476590 KDM2AQ9Y2K7 1162 aa6.23□□□□□ -1.41
CD55-208ENST00000476590 NPM2Q86SE8 214 aaKnown RBP6.21□□□□□ -1.41
CD55-208ENST00000476590 BTBD11A6QL63 1104 aa6.2□□□□□ -1.42
CD55-208ENST00000476590 ITGBL1O95965 494 aaPredicted RBP6.2□□□□□ -1.42
CD55-208ENST00000476590 CCDC180Q9P1Z9 1646 aa6.2□□□□□ -1.42
CD55-208ENST00000476590 PKNOX2Q96KN3 472 aa6.19□□□□□ -1.42
CD55-208ENST00000476590 VSIG10Q8N0Z9 540 aa6.18□□□□□ -1.42
CD55-208ENST00000476590 MYO15BQ96JP2 1530 aa6.18□□□□□ -1.42
CD55-208ENST00000476590 C14orf37Q86TY3 774 aa6.18□□□□□ -1.42
CD55-208ENST00000476590 ILDR1Q86SU0 546 aaPredicted RBP6.16□□□□□ -1.42
CD55-208ENST00000476590 DCAF1Q9Y4B6 1507 aa6.15□□□□□ -1.42
CD55-208ENST00000476590 TRIM26Q12899 539 aaPredicted RBP6.15□□□□□ -1.43
CD55-208ENST00000476590 ERICH6BQ5W0A0 696 aa6.15□□□□□ -1.43
CD55-208ENST00000476590 THSD4Q6ZMP0 1018 aa6.15□□□□□ -1.43
CD55-208ENST00000476590 SUPT5HO00267 1087 aaKnown RBP6.14□□□□□ -1.43
CD55-208ENST00000476590 DPY19L2Q6NUT2 758 aa6.13□□□□□ -1.43
CD55-208ENST00000476590 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
CD55-208ENST00000476590 CLSPNQ9HAW4 1339 aa6.1□□□□□ -1.43
CD55-208ENST00000476590 TSHZ2Q9NRE2 1034 aa6.1□□□□□ -1.43
CD55-208ENST00000476590 SALL2Q9Y467 1007 aaPredicted RBP6.1□□□□□ -1.43
CD55-208ENST00000476590 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
CD55-208ENST00000476590 UBTFP17480 764 aaKnown RBP6.09□□□□□ -1.43
CD55-208ENST00000476590 KHSRPQ92945 711 aaKnown RBP eCLIP6.09□□□□□ -1.438e-7■■■□□ 16.5
CD55-208ENST00000476590 PDZRN3Q9UPQ7 1066 aa6.08□□□□□ -1.44
CD55-208ENST00000476590 PSDA5PKW4 1024 aaPredicted RBP6.07□□□□□ -1.44
CD55-208ENST00000476590 FAM212AQ96EL1 285 aa6.07□□□□□ -1.44
CD55-208ENST00000476590 POTECB2RU33 542 aa6.07□□□□□ -1.44
CD55-208ENST00000476590 NEFLP07196 543 aa6.07□□□□□ -1.44
CD55-208ENST00000476590 LOC105371045A0A1W2PR82 267 aa6.06□□□□□ -1.44
CD55-208ENST00000476590 DCAF8L2P0C7V8 631 aa6.06□□□□□ -1.44
CD55-208ENST00000476590 KCNC4Q03721 635 aa6.05□□□□□ -1.44
CD55-208ENST00000476590 CCDC136Q96JN2 1154 aa6.05□□□□□ -1.44
CD55-208ENST00000476590 PRKD2Q9BZL6 878 aa6.05□□□□□ -1.44
CD55-208ENST00000476590 V9GY48 417 aaPredicted RBP6.05□□□□□ -1.44
CD55-208ENST00000476590 GOLGA8CPA6NN73 597 aa6.04□□□□□ -1.44
CD55-208ENST00000476590 DMRTA1Q5VZB9 504 aa6.04□□□□□ -1.44
CD55-208ENST00000476590 FBXO3Q9UK99 471 aa6.04□□□□□ -1.44
CD55-208ENST00000476590 LHX6Q9UPM6 363 aa6.04□□□□□ -1.44
CD55-208ENST00000476590 SPDYE4A6NLX3 237 aa6.03□□□□□ -1.44
CD55-208ENST00000476590 PCDHB8Q9UN66 801 aa6.03□□□□□ -1.44
CD55-208ENST00000476590 DIEXFQ68CQ4 756 aaKnown RBP6.03□□□□□ -1.44
CD55-208ENST00000476590 PDIA4P13667 645 aaKnown RBP6□□□□□ -1.45
CD55-208ENST00000476590 KCTD17Q8N5Z5 321 aa6□□□□□ -1.45
CD55-208ENST00000476590 WNT2BQ93097 391 aa6□□□□□ -1.45
CD55-208ENST00000476590 KRTAP9-9Q9BYP9 154 aa6□□□□□ -1.45
CD55-208ENST00000476590 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
CD55-208ENST00000476590 PDE4CQ08493 712 aa6□□□□□ -1.45
CD55-208ENST00000476590 NFX1Q12986 1120 aaKnown RBP5.99□□□□□ -1.45
CD55-208ENST00000476590 DGAT1O75907 488 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms