RNA–Protein interactions for RNA: ENST00000476465.5

RAB43-207, Transcript of RAB43, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB43, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-207ENST00000476465 CD109Q6YHK3 1445 aa44.12■■■■■ 4.65
RAB43-207ENST00000476465 CDC42BPBQ9Y5S2 1711 aa44.12■■■■■ 4.65
RAB43-207ENST00000476465 TCOF1Q13428 1488 aaKnown RBP44.11■■■■■ 4.65
RAB43-207ENST00000476465 PTPN23Q9H3S7 1636 aa44.11■■■■■ 4.65
RAB43-207ENST00000476465 FAM50AQ14320 339 aaKnown RBP44.09■■■■■ 4.65
RAB43-207ENST00000476465 ARHGAP5Q13017 1502 aa44.08■■■■■ 4.65
RAB43-207ENST00000476465 EFCAB2Q5VUJ9 269 aa44.06■■■■■ 4.64
RAB43-207ENST00000476465 ZNF777Q9ULD5 760 aaPredicted RBP44.05■■■■■ 4.64
RAB43-207ENST00000476465 ZNF644Q9H582 1327 aaPredicted RBP44.04■■■■■ 4.64
RAB43-207ENST00000476465 MAP3K4Q9Y6R4 1608 aa44.03■■■■■ 4.64
RAB43-207ENST00000476465 CAMSAP2Q08AD1 1489 aa43.99■■■■■ 4.63
RAB43-207ENST00000476465 PCGF6Q9BYE7 350 aa43.98■■■■■ 4.63
RAB43-207ENST00000476465 KIF13AQ9H1H9 1805 aa43.96■■■■■ 4.63
RAB43-207ENST00000476465 FANCAO15360 1455 aa43.96■■■■■ 4.63
RAB43-207ENST00000476465 SAMD9LQ8IVG5 1584 aa43.93■■■■■ 4.62
RAB43-207ENST00000476465 PLEKHH2Q8IVE3 1493 aa43.89■■■■■ 4.62
RAB43-207ENST00000476465 KIAA1107Q9UPP5 1409 aa43.88■■■■■ 4.61
RAB43-207ENST00000476465 NEO1Q92859 1461 aa43.82■■■■■ 4.61
RAB43-207ENST00000476465 CFAP74Q9C0B2 1584 aa43.82■■■■■ 4.61
RAB43-207ENST00000476465 AKNAQ7Z591 1439 aa43.81■■■■■ 4.6
RAB43-207ENST00000476465 ITGAEP38570 1179 aa43.81■■■■■ 4.6
RAB43-207ENST00000476465 MBD5Q9P267 1494 aa43.81■■■■■ 4.6
RAB43-207ENST00000476465 HNRNPMP52272 730 aaKnown RBP eCLIP43.81■■■■■ 4.62e-8■■■■□ 20.3
RAB43-207ENST00000476465 RSPH4AQ5TD94 716 aa43.81■■■■■ 4.6
RAB43-207ENST00000476465 ABCC1P33527 1531 aa43.78■■■■■ 4.6
RAB43-207ENST00000476465 TRHP20396 242 aaPredicted RBP43.77■■■■■ 4.6
RAB43-207ENST00000476465 ABCC5O15440 1437 aa43.76■■■■■ 4.6
RAB43-207ENST00000476465 TEX14Q8IWB6 1497 aa43.76■■■■■ 4.6
RAB43-207ENST00000476465 DAPK1P53355 1430 aa43.76■■■■■ 4.6
RAB43-207ENST00000476465 SYCP2Q9BX26 1530 aa43.75■■■■■ 4.59
RAB43-207ENST00000476465 DNMT1P26358 1616 aaKnown RBP43.75■■■■■ 4.59
RAB43-207ENST00000476465 ARHGEF5Q12774 1597 aa43.75■■■■■ 4.59
RAB43-207ENST00000476465 ARHGEF12Q9NZN5 1544 aa43.75■■■■■ 4.59
RAB43-207ENST00000476465 PPRC1Q5VV67 1664 aaKnown RBP43.74■■■■■ 4.59
RAB43-207ENST00000476465 ADGRL1O94910 1474 aa43.74■■■■■ 4.59
RAB43-207ENST00000476465 PTPRKQ15262 1439 aa43.72■■■■■ 4.59
RAB43-207ENST00000476465 TSPOAP1O95153 1857 aa43.71■■■■■ 4.59
RAB43-207ENST00000476465 SCAPERQ9BY12 1400 aa43.69■■■■■ 4.59
RAB43-207ENST00000476465 CCDC141Q6ZP82 1450 aa43.68■■■■■ 4.58
RAB43-207ENST00000476465 TSPY4P0CV99 314 aa43.63■■■■■ 4.58
RAB43-207ENST00000476465 TSPY10P0CW01 314 aa43.63■■■■■ 4.58
RAB43-207ENST00000476465 TRAPPC8Q9Y2L5 1435 aa43.62■■■■■ 4.57
RAB43-207ENST00000476465 SHANK2Q9UPX8 1470 aa43.6■■■■■ 4.57
RAB43-207ENST00000476465 CHIC2Q9UKJ5 165 aa43.57■■■■■ 4.57
RAB43-207ENST00000476465 CROCC2H7BZ55 1655 aa43.57■■■■■ 4.57
RAB43-207ENST00000476465 AFAP1Q8N556 730 aa43.55■■■■■ 4.56
RAB43-207ENST00000476465 C9orf84Q5VXU9 1444 aa43.53■■■■■ 4.56
RAB43-207ENST00000476465 ROCK1Q13464 1354 aa43.53■■■■■ 4.56
RAB43-207ENST00000476465 DENND4BO75064 1496 aaPredicted RBP43.53■■■■■ 4.56
RAB43-207ENST00000476465 POGZQ7Z3K3 1410 aa43.51■■■■■ 4.56
RAB43-207ENST00000476465 ZNF518AQ6AHZ1 1483 aa43.51■■■■■ 4.56
RAB43-207ENST00000476465 MAST1Q9Y2H9 1570 aa43.48■■■■■ 4.55
RAB43-207ENST00000476465 ADGRL2O95490 1459 aa43.47■■■■■ 4.55
RAB43-207ENST00000476465 SPAG9O60271 1321 aaKnown RBP43.45■■■■■ 4.55
RAB43-207ENST00000476465 NCOA1Q15788 1441 aa43.45■■■■■ 4.55
RAB43-207ENST00000476465 ANKRD30AQ9BXX3 1397 aa43.44■■■■■ 4.54
RAB43-207ENST00000476465 RAPGEF3O95398 923 aa43.43■■■■■ 4.54
RAB43-207ENST00000476465 HFM1A2PYH4 1435 aa43.42■■■■■ 4.54
RAB43-207ENST00000476465 RTEL1-TNFRSF6BF6WH68 1400 aa43.42■■■■■ 4.54
RAB43-207ENST00000476465 RRP7BPQ9NSQ0 103 aa43.4■■■■■ 4.54
RAB43-207ENST00000476465 KDM5CP41229 1560 aa43.4■■■■■ 4.54
RAB43-207ENST00000476465 ADGBQ8N7X0 1667 aa43.39■■■■■ 4.54
RAB43-207ENST00000476465 NAIPQ13075 1403 aa43.36■■■■■ 4.53
RAB43-207ENST00000476465 RICTORQ6R327 1708 aa43.36■■■■■ 4.53
RAB43-207ENST00000476465 SETD5Q9C0A6 1442 aa43.35■■■■■ 4.53
RAB43-207ENST00000476465 COL17A1Q9UMD9 1497 aaPredicted RBP43.34■■■■■ 4.53
RAB43-207ENST00000476465 MLH3Q9UHC1 1453 aa43.33■■■■■ 4.53
RAB43-207ENST00000476465 ZFYVE16Q7Z3T8 1539 aa43.32■■■■■ 4.53
RAB43-207ENST00000476465 INO80Q9ULG1 1556 aaPredicted RBP43.31■■■■■ 4.52
RAB43-207ENST00000476465 FRMPD1Q5SYB0 1578 aa43.3■■■■■ 4.52
RAB43-207ENST00000476465 ATP7AQ04656 1500 aa43.3■■■■■ 4.52
RAB43-207ENST00000476465 PLXNC1O60486 1568 aa43.29■■■■■ 4.52
RAB43-207ENST00000476465 KIF15Q9NS87 1388 aa43.27■■■■■ 4.52
RAB43-207ENST00000476465 MYT1LQ9UL68 1186 aa43.26■■■■■ 4.52
RAB43-207ENST00000476465 GCC2Q8IWJ2 1684 aa43.24■■■■■ 4.51
RAB43-207ENST00000476465 ZMYM4Q5VZL5 1548 aa43.24■■■■■ 4.51
RAB43-207ENST00000476465 HECW2Q9P2P5 1572 aa43.24■■■■■ 4.51
RAB43-207ENST00000476465 HRCP23327 699 aa43.23■■■■■ 4.51
RAB43-207ENST00000476465 RAB3GAP2Q9H2M9 1393 aa43.23■■■■■ 4.51
RAB43-207ENST00000476465 KIDINS220Q9ULH0 1771 aa43.22■■■■■ 4.51
RAB43-207ENST00000476465 MAGI2Q86UL8 1455 aa43.18■■■■■ 4.5
RAB43-207ENST00000476465 ANKRD50Q9ULJ7 1429 aa43.16■■■■■ 4.5
RAB43-207ENST00000476465 DUOX2Q9NRD8 1548 aa43.14■■■■■ 4.5
RAB43-207ENST00000476465 KDM6BO15054 1643 aa43.1■■■■■ 4.49
RAB43-207ENST00000476465 DHX29Q7Z478 1369 aaKnown RBP43.06■■■■■ 4.48
RAB43-207ENST00000476465 ACIN1Q9UKV3 1341 aaKnown RBP43.06■■■■■ 4.48
RAB43-207ENST00000476465 ERBINQ96RT1 1412 aa43.06■■■■■ 4.48
RAB43-207ENST00000476465 YEATS2Q9ULM3 1422 aa43.06■■■■■ 4.48
RAB43-207ENST00000476465 ABCA6Q8N139 1617 aa43.04■■■■■ 4.48
RAB43-207ENST00000476465 DIP2CQ9Y2E4 1556 aa43.02■■■■■ 4.48
RAB43-207ENST00000476465 A2MP01023 1474 aa43.01■■■■■ 4.48
RAB43-207ENST00000476465 ATP10AO60312 1499 aa42.95■■■■■ 4.47
RAB43-207ENST00000476465 ARHGEF40Q8TER5 1519 aa42.9■■■■■ 4.46
RAB43-207ENST00000476465 EIF2AK4Q9P2K8 1649 aaKnown RBP42.87■■■■■ 4.45
RAB43-207ENST00000476465 TRIM52Q96A61 297 aa42.86■■■■■ 4.45
RAB43-207ENST00000476465 REREQ9P2R6 1566 aa42.85■■■■■ 4.45
RAB43-207ENST00000476465 KIF3BO15066 747 aa42.84■■■■■ 4.45
RAB43-207ENST00000476465 DHX57Q6P158 1386 aaKnown RBP42.77■■■■■ 4.44
RAB43-207ENST00000476465 UNC13BO14795 1591 aa42.77■■■■■ 4.44
RAB43-207ENST00000476465 BCORL1Q5H9F3 1711 aa42.77■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms