RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
RAPGEF3-208ENST00000476259 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
RAPGEF3-208ENST00000476259 SCAPERQ9BY12 1400 aa28.77■■■□□ 2.2
RAPGEF3-208ENST00000476259 CDC42BPAQ5VT25 1732 aa28.77■■■□□ 2.2
RAPGEF3-208ENST00000476259 POGZQ7Z3K3 1410 aa28.75■■■□□ 2.19
RAPGEF3-208ENST00000476259 LOC105371045A0A1W2PR82 267 aa28.72■■■□□ 2.19
RAPGEF3-208ENST00000476259 ZFYVE16Q7Z3T8 1539 aa28.72■■■□□ 2.19
RAPGEF3-208ENST00000476259 BCORL1Q5H9F3 1711 aa28.7■■■□□ 2.19
RAPGEF3-208ENST00000476259 MAGI2Q86UL8 1455 aa28.69■■■□□ 2.18
RAPGEF3-208ENST00000476259 ADAMTSL3P82987 1691 aa28.69■■■□□ 2.18
RAPGEF3-208ENST00000476259 YEATS2Q9ULM3 1422 aa28.66■■■□□ 2.18
RAPGEF3-208ENST00000476259 ZNF518AQ6AHZ1 1483 aa28.65■■■□□ 2.18
RAPGEF3-208ENST00000476259 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.18
RAPGEF3-208ENST00000476259 SIGLEC1Q9BZZ2 1709 aa28.64■■■□□ 2.18
RAPGEF3-208ENST00000476259 ARID4BQ4LE39 1312 aaPredicted RBP28.64■■■□□ 2.17
RAPGEF3-208ENST00000476259 ABCC1P33527 1531 aa28.64■■■□□ 2.17
RAPGEF3-208ENST00000476259 MTUS2Q5JR59 1369 aa28.62■■■□□ 2.17
RAPGEF3-208ENST00000476259 KDM5CP41229 1560 aa28.62■■■□□ 2.17
RAPGEF3-208ENST00000476259 EHBP1L1Q8N3D4 1523 aa28.6■■■□□ 2.17
RAPGEF3-208ENST00000476259 MADDQ8WXG6 1647 aa28.6■■■□□ 2.17
RAPGEF3-208ENST00000476259 HECW2Q9P2P5 1572 aa28.58■■■□□ 2.17
RAPGEF3-208ENST00000476259 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
RAPGEF3-208ENST00000476259 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
RAPGEF3-208ENST00000476259 ARHGEF12Q9NZN5 1544 aa28.56■■■□□ 2.16
RAPGEF3-208ENST00000476259 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
RAPGEF3-208ENST00000476259 ATP10AO60312 1499 aa28.53■■■□□ 2.16
RAPGEF3-208ENST00000476259 RIMS1Q86UR5 1692 aaKnown RBP28.53■■■□□ 2.16
RAPGEF3-208ENST00000476259 VPS8Q8N3P4 1428 aa28.52■■■□□ 2.16
RAPGEF3-208ENST00000476259 PTPRMP28827 1452 aa28.52■■■□□ 2.16
RAPGEF3-208ENST00000476259 TRAPPC8Q9Y2L5 1435 aa28.52■■■□□ 2.16
RAPGEF3-208ENST00000476259 CCNB3Q8WWL7 1395 aa28.51■■■□□ 2.16
RAPGEF3-208ENST00000476259 TIAM1Q13009 1591 aa28.51■■■□□ 2.15
RAPGEF3-208ENST00000476259 C9orf84Q5VXU9 1444 aa28.51■■■□□ 2.15
RAPGEF3-208ENST00000476259 ZNF777Q9ULD5 760 aaPredicted RBP28.5■■■□□ 2.15
RAPGEF3-208ENST00000476259 ABCA6Q8N139 1617 aa28.5■■■□□ 2.15
RAPGEF3-208ENST00000476259 DIP2CQ9Y2E4 1556 aa28.5■■■□□ 2.15
RAPGEF3-208ENST00000476259 SYCP2Q9BX26 1530 aa28.49■■■□□ 2.15
RAPGEF3-208ENST00000476259 SUPT6HQ7KZ85 1726 aaKnown RBP28.49■■■□□ 2.15
RAPGEF3-208ENST00000476259 MYT1LQ9UL68 1186 aa28.48■■■□□ 2.15
RAPGEF3-208ENST00000476259 FER1L4A9Z1Z3 1794 aa28.47■■■□□ 2.15
RAPGEF3-208ENST00000476259 MLH3Q9UHC1 1453 aa28.47■■■□□ 2.15
RAPGEF3-208ENST00000476259 KIDINS220Q9ULH0 1771 aa28.46■■■□□ 2.15
RAPGEF3-208ENST00000476259 CFDP1Q9UEE9 299 aaPredicted RBP28.45■■■□□ 2.14
RAPGEF3-208ENST00000476259 REREQ9P2R6 1566 aa28.43■■■□□ 2.14
RAPGEF3-208ENST00000476259 PLEKHH2Q8IVE3 1493 aa28.42■■■□□ 2.14
RAPGEF3-208ENST00000476259 MLECQ14165 292 aa28.4■■■□□ 2.14
RAPGEF3-208ENST00000476259 KIAA1107Q9UPP5 1409 aa28.39■■■□□ 2.14
RAPGEF3-208ENST00000476259 NCOA2Q15596 1464 aa28.39■■■□□ 2.13
RAPGEF3-208ENST00000476259 HNRNPMP52272 730 aaKnown RBP eCLIP28.38■■■□□ 2.13
RAPGEF3-208ENST00000476259 LRRC9Q6ZRR7 1453 aa28.35■■■□□ 2.13
RAPGEF3-208ENST00000476259 MAP3K1Q13233 1512 aa28.33■■■□□ 2.13
RAPGEF3-208ENST00000476259 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.13
RAPGEF3-208ENST00000476259 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
RAPGEF3-208ENST00000476259 SPAG9O60271 1321 aaKnown RBP28.31■■■□□ 2.12
RAPGEF3-208ENST00000476259 AGLP35573 1532 aa28.31■■■□□ 2.12
RAPGEF3-208ENST00000476259 ZNF644Q9H582 1327 aaPredicted RBP28.3■■■□□ 2.12
RAPGEF3-208ENST00000476259 PLPPR3Q6T4P5 718 aa28.27■■■□□ 2.12
RAPGEF3-208ENST00000476259 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
RAPGEF3-208ENST00000476259 CAMSAP2Q08AD1 1489 aa28.25■■■□□ 2.11
RAPGEF3-208ENST00000476259 ADGBQ8N7X0 1667 aa28.24■■■□□ 2.11
RAPGEF3-208ENST00000476259 KANK4Q5T7N3 995 aaPredicted RBP28.22■■■□□ 2.11
RAPGEF3-208ENST00000476259 LMTK3Q96Q04 1460 aa28.2■■■□□ 2.1
RAPGEF3-208ENST00000476259 PLXNC1O60486 1568 aa28.2■■■□□ 2.1
RAPGEF3-208ENST00000476259 C3P01024 1663 aa28.17■■■□□ 2.1
RAPGEF3-208ENST00000476259 A2MP01023 1474 aa28.17■■■□□ 2.1
RAPGEF3-208ENST00000476259 CCDC141Q6ZP82 1450 aa28.17■■■□□ 2.1
RAPGEF3-208ENST00000476259 APLP2Q06481 763 aa28.15■■■□□ 2.1
RAPGEF3-208ENST00000476259 PREX1Q8TCU6 1659 aa28.15■■■□□ 2.1
RAPGEF3-208ENST00000476259 ARHGEF5Q12774 1597 aa28.15■■■□□ 2.1
RAPGEF3-208ENST00000476259 RTEL1-TNFRSF6BF6WH68 1400 aa28.14■■■□□ 2.1
RAPGEF3-208ENST00000476259 CEBPAP49715 358 aaPredicted RBP28.12■■■□□ 2.09
RAPGEF3-208ENST00000476259 MYOM3Q5VTT5 1437 aa28.11■■■□□ 2.09
RAPGEF3-208ENST00000476259 ESF1Q9H501 851 aaKnown RBP28.11■■■□□ 2.09
RAPGEF3-208ENST00000476259 MROH2AA6NES4 1674 aa28.1■■■□□ 2.09
RAPGEF3-208ENST00000476259 RSPH4AQ5TD94 716 aa28.09■■■□□ 2.09
RAPGEF3-208ENST00000476259 CNTLNQ9NXG0 1405 aa28.08■■■□□ 2.09
RAPGEF3-208ENST00000476259 CLTCQ00610 1675 aaKnown RBP28.07■■■□□ 2.08
RAPGEF3-208ENST00000476259 MIA2Q96PC5 1412 aa28.07■■■□□ 2.08
RAPGEF3-208ENST00000476259 SETD1BQ9UPS6 1966 aaKnown RBP28.06■■■□□ 2.08
RAPGEF3-208ENST00000476259 MAST1Q9Y2H9 1570 aa28.02■■■□□ 2.08
RAPGEF3-208ENST00000476259 DHX29Q7Z478 1369 aaKnown RBP28.01■■■□□ 2.07
RAPGEF3-208ENST00000476259 HSPA2P54652 639 aa28.01■■■□□ 2.07
RAPGEF3-208ENST00000476259 TSPY4P0CV99 314 aa28■■■□□ 2.07
RAPGEF3-208ENST00000476259 TSPY10P0CW01 314 aa28■■■□□ 2.07
RAPGEF3-208ENST00000476259 PTPN23Q9H3S7 1636 aa28■■■□□ 2.07
RAPGEF3-208ENST00000476259 GGT6Q6P531 493 aa27.98■■■□□ 2.07
RAPGEF3-208ENST00000476259 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
RAPGEF3-208ENST00000476259 CROCC2H7BZ55 1655 aa27.97■■■□□ 2.07
RAPGEF3-208ENST00000476259 ZMYM3Q14202 1370 aa27.93■■■□□ 2.06
RAPGEF3-208ENST00000476259 FGD6Q6ZV73 1430 aa27.91■■■□□ 2.06
RAPGEF3-208ENST00000476259 KIF3BO15066 747 aa27.9■■■□□ 2.06
RAPGEF3-208ENST00000476259 PPP6R1Q9UPN7 881 aa27.9■■■□□ 2.06
RAPGEF3-208ENST00000476259 NPATQ14207 1427 aa27.89■■■□□ 2.06
RAPGEF3-208ENST00000476259 DNMT1P26358 1616 aaKnown RBP27.89■■■□□ 2.05
RAPGEF3-208ENST00000476259 TCOF1Q13428 1488 aaKnown RBP27.88■■■□□ 2.05
RAPGEF3-208ENST00000476259 EIF2AK4Q9P2K8 1649 aaKnown RBP27.87■■■□□ 2.05
RAPGEF3-208ENST00000476259 FAM135AQ9P2D6 1515 aa27.86■■■□□ 2.05
RAPGEF3-208ENST00000476259 STRCQ7RTU9 1775 aa27.86■■■□□ 2.05
RAPGEF3-208ENST00000476259 KDM5DQ9BY66 1539 aa27.85■■■□□ 2.05
RAPGEF3-208ENST00000476259 RNF17Q9BXT8 1623 aaKnown RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms