RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 CD109Q6YHK3 1445 aa29.02■■■□□ 2.24
NR1H3-219ENST00000476086 RRBP1Q9P2E9 1410 aaKnown RBP29.02■■■□□ 2.24
NR1H3-219ENST00000476086 ARHGAP5Q13017 1502 aa29■■■□□ 2.23
NR1H3-219ENST00000476086 PTPN23Q9H3S7 1636 aa28.99■■■□□ 2.23
NR1H3-219ENST00000476086 CFAP74Q9C0B2 1584 aa28.97■■■□□ 2.23
NR1H3-219ENST00000476086 TRIM26Q12899 539 aaPredicted RBP28.96■■■□□ 2.23
NR1H3-219ENST00000476086 EFCAB2Q5VUJ9 269 aa28.95■■■□□ 2.22
NR1H3-219ENST00000476086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.94■■■□□ 2.22
NR1H3-219ENST00000476086 TCOF1Q13428 1488 aaKnown RBP28.93■■■□□ 2.22
NR1H3-219ENST00000476086 FANCAO15360 1455 aa28.91■■■□□ 2.22
NR1H3-219ENST00000476086 TSPOAP1O95153 1857 aa28.9■■■□□ 2.22
NR1H3-219ENST00000476086 FAM50AQ14320 339 aaKnown RBP28.9■■■□□ 2.22
NR1H3-219ENST00000476086 ZNF777Q9ULD5 760 aaPredicted RBP28.9■■■□□ 2.22
NR1H3-219ENST00000476086 CAMSAP2Q08AD1 1489 aa28.9■■■□□ 2.22
NR1H3-219ENST00000476086 PLEKHH2Q8IVE3 1493 aa28.9■■■□□ 2.22
NR1H3-219ENST00000476086 TEX14Q8IWB6 1497 aa28.88■■■□□ 2.21
NR1H3-219ENST00000476086 SAMD9LQ8IVG5 1584 aa28.88■■■□□ 2.21
NR1H3-219ENST00000476086 TRHP20396 242 aaPredicted RBP28.86■■■□□ 2.21
NR1H3-219ENST00000476086 NEO1Q92859 1461 aa28.85■■■□□ 2.21
NR1H3-219ENST00000476086 PPRC1Q5VV67 1664 aaKnown RBP28.83■■■□□ 2.21
NR1H3-219ENST00000476086 KIAA1107Q9UPP5 1409 aa28.81■■■□□ 2.2
NR1H3-219ENST00000476086 ZNF644Q9H582 1327 aaPredicted RBP28.81■■■□□ 2.2
NR1H3-219ENST00000476086 ABCC1P33527 1531 aa28.79■■■□□ 2.2
NR1H3-219ENST00000476086 AKNAQ7Z591 1439 aa28.79■■■□□ 2.2
NR1H3-219ENST00000476086 RSPH4AQ5TD94 716 aa28.78■■■□□ 2.2
NR1H3-219ENST00000476086 DNMT1P26358 1616 aaKnown RBP28.77■■■□□ 2.2
NR1H3-219ENST00000476086 ARHGEF5Q12774 1597 aa28.77■■■□□ 2.2
NR1H3-219ENST00000476086 ADGRL1O94910 1474 aa28.77■■■□□ 2.2
NR1H3-219ENST00000476086 SYCP2Q9BX26 1530 aa28.76■■■□□ 2.19
NR1H3-219ENST00000476086 CROCC2H7BZ55 1655 aa28.71■■■□□ 2.19
NR1H3-219ENST00000476086 HNRNPMP52272 730 aaKnown RBP eCLIP28.71■■■□□ 2.19
NR1H3-219ENST00000476086 CCDC141Q6ZP82 1450 aa28.71■■■□□ 2.19
NR1H3-219ENST00000476086 MBD5Q9P267 1494 aa28.71■■■□□ 2.19
NR1H3-219ENST00000476086 DAPK1P53355 1430 aa28.7■■■□□ 2.19
NR1H3-219ENST00000476086 SCAPERQ9BY12 1400 aa28.7■■■□□ 2.19
NR1H3-219ENST00000476086 ITGAEP38570 1179 aa28.68■■■□□ 2.18
NR1H3-219ENST00000476086 ARHGEF12Q9NZN5 1544 aa28.67■■■□□ 2.18
NR1H3-219ENST00000476086 ABCC5O15440 1437 aa28.67■■■□□ 2.18
NR1H3-219ENST00000476086 TSPY4P0CV99 314 aa28.66■■■□□ 2.18
NR1H3-219ENST00000476086 TSPY10P0CW01 314 aa28.66■■■□□ 2.18
NR1H3-219ENST00000476086 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
NR1H3-219ENST00000476086 DENND4BO75064 1496 aaPredicted RBP28.65■■■□□ 2.18
NR1H3-219ENST00000476086 SHANK2Q9UPX8 1470 aa28.65■■■□□ 2.18
NR1H3-219ENST00000476086 ZNF518AQ6AHZ1 1483 aa28.64■■■□□ 2.17
NR1H3-219ENST00000476086 ADGBQ8N7X0 1667 aa28.62■■■□□ 2.17
NR1H3-219ENST00000476086 POGZQ7Z3K3 1410 aa28.6■■■□□ 2.17
NR1H3-219ENST00000476086 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
NR1H3-219ENST00000476086 MAST1Q9Y2H9 1570 aa28.6■■■□□ 2.17
NR1H3-219ENST00000476086 RICTORQ6R327 1708 aa28.59■■■□□ 2.17
NR1H3-219ENST00000476086 C9orf84Q5VXU9 1444 aa28.58■■■□□ 2.17
NR1H3-219ENST00000476086 KDM5CP41229 1560 aa28.56■■■□□ 2.16
NR1H3-219ENST00000476086 PTPRKQ15262 1439 aa28.56■■■□□ 2.16
NR1H3-219ENST00000476086 ROCK1Q13464 1354 aa28.55■■■□□ 2.16
NR1H3-219ENST00000476086 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
NR1H3-219ENST00000476086 SPAG9O60271 1321 aaKnown RBP28.54■■■□□ 2.16
NR1H3-219ENST00000476086 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
NR1H3-219ENST00000476086 RTEL1-TNFRSF6BF6WH68 1400 aa28.53■■■□□ 2.16
NR1H3-219ENST00000476086 ANKRD30AQ9BXX3 1397 aa28.53■■■□□ 2.16
NR1H3-219ENST00000476086 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
NR1H3-219ENST00000476086 HECW2Q9P2P5 1572 aa28.5■■■□□ 2.15
NR1H3-219ENST00000476086 INO80Q9ULG1 1556 aaPredicted RBP28.5■■■□□ 2.15
NR1H3-219ENST00000476086 PLXNC1O60486 1568 aa28.5■■■□□ 2.15
NR1H3-219ENST00000476086 FRMPD1Q5SYB0 1578 aa28.5■■■□□ 2.15
NR1H3-219ENST00000476086 ATP7AQ04656 1500 aa28.49■■■□□ 2.15
NR1H3-219ENST00000476086 RAPGEF3O95398 923 aa28.49■■■□□ 2.15
NR1H3-219ENST00000476086 ZMYM4Q5VZL5 1548 aa28.48■■■□□ 2.15
NR1H3-219ENST00000476086 ZFYVE16Q7Z3T8 1539 aa28.48■■■□□ 2.15
NR1H3-219ENST00000476086 MLH3Q9UHC1 1453 aa28.48■■■□□ 2.15
NR1H3-219ENST00000476086 MYT1LQ9UL68 1186 aa28.48■■■□□ 2.15
NR1H3-219ENST00000476086 KDM6BO15054 1643 aa28.47■■■□□ 2.15
NR1H3-219ENST00000476086 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
NR1H3-219ENST00000476086 GCC2Q8IWJ2 1684 aa28.46■■■□□ 2.15
NR1H3-219ENST00000476086 HFM1A2PYH4 1435 aa28.45■■■□□ 2.15
NR1H3-219ENST00000476086 KIDINS220Q9ULH0 1771 aa28.45■■■□□ 2.15
NR1H3-219ENST00000476086 MAGI2Q86UL8 1455 aa28.44■■■□□ 2.14
NR1H3-219ENST00000476086 COL17A1Q9UMD9 1497 aaPredicted RBP28.42■■■□□ 2.14
NR1H3-219ENST00000476086 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
NR1H3-219ENST00000476086 KIF15Q9NS87 1388 aa28.4■■■□□ 2.14
NR1H3-219ENST00000476086 NAIPQ13075 1403 aa28.39■■■□□ 2.14
NR1H3-219ENST00000476086 SETD5Q9C0A6 1442 aa28.39■■■□□ 2.14
NR1H3-219ENST00000476086 DUOX2Q9NRD8 1548 aa28.38■■■□□ 2.13
NR1H3-219ENST00000476086 ACIN1Q9UKV3 1341 aaKnown RBP28.34■■■□□ 2.13
NR1H3-219ENST00000476086 ABCA6Q8N139 1617 aa28.33■■■□□ 2.13
NR1H3-219ENST00000476086 DIP2CQ9Y2E4 1556 aa28.32■■■□□ 2.12
NR1H3-219ENST00000476086 ANKRD50Q9ULJ7 1429 aa28.31■■■□□ 2.12
NR1H3-219ENST00000476086 ERBINQ96RT1 1412 aa28.3■■■□□ 2.12
NR1H3-219ENST00000476086 HRCP23327 699 aa28.29■■■□□ 2.12
NR1H3-219ENST00000476086 ARHGEF40Q8TER5 1519 aa28.28■■■□□ 2.12
NR1H3-219ENST00000476086 RAB3GAP2Q9H2M9 1393 aa28.28■■■□□ 2.12
NR1H3-219ENST00000476086 A2MP01023 1474 aa28.27■■■□□ 2.12
NR1H3-219ENST00000476086 YEATS2Q9ULM3 1422 aa28.26■■■□□ 2.12
NR1H3-219ENST00000476086 DHX29Q7Z478 1369 aaKnown RBP28.26■■■□□ 2.12
NR1H3-219ENST00000476086 EIF2AK4Q9P2K8 1649 aaKnown RBP28.26■■■□□ 2.11
NR1H3-219ENST00000476086 ATP10AO60312 1499 aa28.26■■■□□ 2.11
NR1H3-219ENST00000476086 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
NR1H3-219ENST00000476086 BCORL1Q5H9F3 1711 aa28.19■■■□□ 2.1
NR1H3-219ENST00000476086 UNC13BO14795 1591 aa28.14■■■□□ 2.1
NR1H3-219ENST00000476086 AGLP35573 1532 aa28.13■■■□□ 2.09
NR1H3-219ENST00000476086 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
NR1H3-219ENST00000476086 KIF3BO15066 747 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms