RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 WDR7Q9Y4E6 1490 aa27.03■■□□□ 1.92
LAMP3-204ENST00000476015 ITSN2Q9NZM3 1697 aa27.01■■□□□ 1.92
LAMP3-204ENST00000476015 ZNF777Q9ULD5 760 aaPredicted RBP27■■□□□ 1.91
LAMP3-204ENST00000476015 TSPOAP1O95153 1857 aa27■■□□□ 1.91
LAMP3-204ENST00000476015 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.98■■□□□ 1.91
LAMP3-204ENST00000476015 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
LAMP3-204ENST00000476015 CDC42BPAQ5VT25 1732 aa26.94■■□□□ 1.9
LAMP3-204ENST00000476015 PLCH2O75038 1416 aa26.92■■□□□ 1.9
LAMP3-204ENST00000476015 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
LAMP3-204ENST00000476015 RSPH4AQ5TD94 716 aa26.9■■□□□ 1.9
LAMP3-204ENST00000476015 TTC37Q6PGP7 1564 aa26.88■■□□□ 1.89
LAMP3-204ENST00000476015 CAMSAP2Q08AD1 1489 aa26.88■■□□□ 1.89
LAMP3-204ENST00000476015 HRCP23327 699 aa26.86■■□□□ 1.89
LAMP3-204ENST00000476015 PREX2Q70Z35 1606 aa26.86■■□□□ 1.89
LAMP3-204ENST00000476015 PTPRKQ15262 1439 aa26.85■■□□□ 1.89
LAMP3-204ENST00000476015 SETD5Q9C0A6 1442 aa26.85■■□□□ 1.89
LAMP3-204ENST00000476015 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
LAMP3-204ENST00000476015 MYO5CQ9NQX4 1742 aa26.85■■□□□ 1.89
LAMP3-204ENST00000476015 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
LAMP3-204ENST00000476015 ABCC5O15440 1437 aa26.83■■□□□ 1.89
LAMP3-204ENST00000476015 DAPK1P53355 1430 aa26.82■■□□□ 1.88
LAMP3-204ENST00000476015 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.88
LAMP3-204ENST00000476015 CHIC2Q9UKJ5 165 aa26.82■■□□□ 1.88
LAMP3-204ENST00000476015 ABCA9Q8IUA7 1624 aa26.82■■□□□ 1.88
LAMP3-204ENST00000476015 TSPY4P0CV99 314 aa26.81■■□□□ 1.88
LAMP3-204ENST00000476015 TSPY10P0CW01 314 aa26.81■■□□□ 1.88
LAMP3-204ENST00000476015 CCER1Q8TC90 406 aaPredicted RBP26.81■■□□□ 1.88
LAMP3-204ENST00000476015 ADGRL1O94910 1474 aa26.81■■□□□ 1.88
LAMP3-204ENST00000476015 PLEKHH2Q8IVE3 1493 aa26.81■■□□□ 1.88
LAMP3-204ENST00000476015 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
LAMP3-204ENST00000476015 DNMT1P26358 1616 aaKnown RBP26.79■■□□□ 1.88
LAMP3-204ENST00000476015 KIAA1107Q9UPP5 1409 aa26.78■■□□□ 1.88
LAMP3-204ENST00000476015 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
LAMP3-204ENST00000476015 CD109Q6YHK3 1445 aa26.75■■□□□ 1.87
LAMP3-204ENST00000476015 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
LAMP3-204ENST00000476015 PPRC1Q5VV67 1664 aaKnown RBP26.74■■□□□ 1.87
LAMP3-204ENST00000476015 SAMD9LQ8IVG5 1584 aa26.74■■□□□ 1.87
LAMP3-204ENST00000476015 HFM1A2PYH4 1435 aa26.73■■□□□ 1.87
LAMP3-204ENST00000476015 AKNAQ7Z591 1439 aa26.73■■□□□ 1.87
LAMP3-204ENST00000476015 RAB3GAP2Q9H2M9 1393 aa26.73■■□□□ 1.87
LAMP3-204ENST00000476015 MBD5Q9P267 1494 aa26.73■■□□□ 1.87
LAMP3-204ENST00000476015 ARHGEF5Q12774 1597 aa26.71■■□□□ 1.87
LAMP3-204ENST00000476015 ACIN1Q9UKV3 1341 aaKnown RBP26.71■■□□□ 1.87
LAMP3-204ENST00000476015 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
LAMP3-204ENST00000476015 GLI2P10070 1586 aa26.7■■□□□ 1.86
LAMP3-204ENST00000476015 NAIPQ13075 1403 aa26.69■■□□□ 1.86
LAMP3-204ENST00000476015 FANCAO15360 1455 aa26.68■■□□□ 1.86
LAMP3-204ENST00000476015 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
LAMP3-204ENST00000476015 ANKRD30AQ9BXX3 1397 aa26.68■■□□□ 1.86
LAMP3-204ENST00000476015 HECW2Q9P2P5 1572 aa26.67■■□□□ 1.86
LAMP3-204ENST00000476015 CCDC141Q6ZP82 1450 aa26.66■■□□□ 1.86
LAMP3-204ENST00000476015 SHANK2Q9UPX8 1470 aa26.65■■□□□ 1.86
LAMP3-204ENST00000476015 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
LAMP3-204ENST00000476015 SYCP2Q9BX26 1530 aa26.63■■□□□ 1.85
LAMP3-204ENST00000476015 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
LAMP3-204ENST00000476015 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
LAMP3-204ENST00000476015 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
LAMP3-204ENST00000476015 CROCC2H7BZ55 1655 aa26.6■■□□□ 1.85
LAMP3-204ENST00000476015 ABCC1P33527 1531 aa26.6■■□□□ 1.85
LAMP3-204ENST00000476015 SCAPERQ9BY12 1400 aa26.58■■□□□ 1.85
LAMP3-204ENST00000476015 DHX57Q6P158 1386 aaKnown RBP26.57■■□□□ 1.84
LAMP3-204ENST00000476015 CFAP74Q9C0B2 1584 aa26.56■■□□□ 1.84
LAMP3-204ENST00000476015 AFAP1Q8N556 730 aa26.56■■□□□ 1.84
LAMP3-204ENST00000476015 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
LAMP3-204ENST00000476015 ADGBQ8N7X0 1667 aa26.56■■□□□ 1.84
LAMP3-204ENST00000476015 TRAPPC8Q9Y2L5 1435 aa26.55■■□□□ 1.84
LAMP3-204ENST00000476015 NEO1Q92859 1461 aa26.55■■□□□ 1.84
LAMP3-204ENST00000476015 MAP3K4Q9Y6R4 1608 aa26.54■■□□□ 1.84
LAMP3-204ENST00000476015 SPAG9O60271 1321 aaKnown RBP26.54■■□□□ 1.84
LAMP3-204ENST00000476015 MAST1Q9Y2H9 1570 aa26.54■■□□□ 1.84
LAMP3-204ENST00000476015 GCC2Q8IWJ2 1684 aa26.54■■□□□ 1.84
LAMP3-204ENST00000476015 TRIM52Q96A61 297 aa26.52■■□□□ 1.84
LAMP3-204ENST00000476015 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
LAMP3-204ENST00000476015 TEX14Q8IWB6 1497 aa26.49■■□□□ 1.83
LAMP3-204ENST00000476015 KIF15Q9NS87 1388 aa26.48■■□□□ 1.83
LAMP3-204ENST00000476015 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
LAMP3-204ENST00000476015 MYT1LQ9UL68 1186 aa26.46■■□□□ 1.83
LAMP3-204ENST00000476015 ZNF518AQ6AHZ1 1483 aa26.42■■□□□ 1.82
LAMP3-204ENST00000476015 DENND4BO75064 1496 aaPredicted RBP26.41■■□□□ 1.82
LAMP3-204ENST00000476015 PLXNC1O60486 1568 aa26.38■■□□□ 1.81
LAMP3-204ENST00000476015 MPHOSPH9Q99550 1183 aa26.38■■□□□ 1.81
LAMP3-204ENST00000476015 FBXO41Q8TF61 875 aa26.37■■□□□ 1.81
LAMP3-204ENST00000476015 DUOX2Q9NRD8 1548 aa26.37■■□□□ 1.81
LAMP3-204ENST00000476015 POGZQ7Z3K3 1410 aa26.37■■□□□ 1.81
LAMP3-204ENST00000476015 RAPGEF3O95398 923 aa26.35■■□□□ 1.81
LAMP3-204ENST00000476015 ATP7AQ04656 1500 aa26.33■■□□□ 1.81
LAMP3-204ENST00000476015 MLH3Q9UHC1 1453 aa26.32■■□□□ 1.8
LAMP3-204ENST00000476015 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
LAMP3-204ENST00000476015 ZFYVE16Q7Z3T8 1539 aa26.3■■□□□ 1.8
LAMP3-204ENST00000476015 ERBINQ96RT1 1412 aa26.3■■□□□ 1.8
LAMP3-204ENST00000476015 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
LAMP3-204ENST00000476015 NUP155O75694 1391 aa26.29■■□□□ 1.8
LAMP3-204ENST00000476015 DHX29Q7Z478 1369 aaKnown RBP26.29■■□□□ 1.8
LAMP3-204ENST00000476015 KDM5CP41229 1560 aa26.29■■□□□ 1.8
LAMP3-204ENST00000476015 KIDINS220Q9ULH0 1771 aa26.23■■□□□ 1.79
LAMP3-204ENST00000476015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.22■■□□□ 1.79
LAMP3-204ENST00000476015 RICTORQ6R327 1708 aa26.2■■□□□ 1.79
LAMP3-204ENST00000476015 PZPP20742 1482 aa26.2■■□□□ 1.78
LAMP3-204ENST00000476015 TIMELESSQ9UNS1 1208 aa26.2■■□□□ 1.78
LAMP3-204ENST00000476015 KIF3BO15066 747 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms