RNA–Protein interactions for RNA: ENST00000475965.1

HDAC10-210, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-210ENST00000475965 PCF11O94913 1555 aaKnown RBP30.12■■■□□ 2.41
HDAC10-210ENST00000475965 YEATS2Q9ULM3 1422 aa30.12■■■□□ 2.41
HDAC10-210ENST00000475965 KIF14Q15058 1648 aa30.11■■■□□ 2.41
HDAC10-210ENST00000475965 SCAPERQ9BY12 1400 aa30.1■■■□□ 2.41
HDAC10-210ENST00000475965 LRRIQ1Q96JM4 1722 aa30.09■■■□□ 2.41
HDAC10-210ENST00000475965 CDK11AQ9UQ88 783 aaPredicted RBP30.09■■■□□ 2.41
HDAC10-210ENST00000475965 LMTK3Q96Q04 1460 aa30.06■■■□□ 2.4
HDAC10-210ENST00000475965 FER1L4A9Z1Z3 1794 aa30.05■■■□□ 2.4
HDAC10-210ENST00000475965 TROQ12816 1431 aaPredicted RBP30.04■■■□□ 2.4
HDAC10-210ENST00000475965 EFCAB2Q5VUJ9 269 aa30.02■■■□□ 2.4
HDAC10-210ENST00000475965 CLIP1P30622 1438 aa30.02■■■□□ 2.4
HDAC10-210ENST00000475965 ARHGAP5Q13017 1502 aa29.99■■■□□ 2.39
HDAC10-210ENST00000475965 ATP10AO60312 1499 aa29.96■■■□□ 2.39
HDAC10-210ENST00000475965 ZNF518AQ6AHZ1 1483 aa29.96■■■□□ 2.39
HDAC10-210ENST00000475965 C9orf84Q5VXU9 1444 aa29.96■■■□□ 2.39
HDAC10-210ENST00000475965 CDC42BPBQ9Y5S2 1711 aa29.94■■■□□ 2.38
HDAC10-210ENST00000475965 KDM5CP41229 1560 aa29.93■■■□□ 2.38
HDAC10-210ENST00000475965 MLECQ14165 292 aa29.92■■■□□ 2.38
HDAC10-210ENST00000475965 CCDC18Q5T9S5 1454 aa29.92■■■□□ 2.38
HDAC10-210ENST00000475965 PLPPR3Q6T4P5 718 aa29.91■■■□□ 2.38
HDAC10-210ENST00000475965 ARHGEF12Q9NZN5 1544 aa29.91■■■□□ 2.38
HDAC10-210ENST00000475965 PREX2Q70Z35 1606 aa29.9■■■□□ 2.38
HDAC10-210ENST00000475965 CASKIN1Q8WXD9 1431 aa29.89■■■□□ 2.38
HDAC10-210ENST00000475965 FBXO41Q8TF61 875 aa29.87■■■□□ 2.37
HDAC10-210ENST00000475965 DIP2CQ9Y2E4 1556 aa29.83■■■□□ 2.37
HDAC10-210ENST00000475965 HSPA2P54652 639 aa29.82■■■□□ 2.36
HDAC10-210ENST00000475965 AFAP1Q8N556 730 aa29.82■■■□□ 2.36
HDAC10-210ENST00000475965 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
HDAC10-210ENST00000475965 ITSN2Q9NZM3 1697 aa29.82■■■□□ 2.36
HDAC10-210ENST00000475965 ABCC1P33527 1531 aa29.81■■■□□ 2.36
HDAC10-210ENST00000475965 CDC42BPAQ5VT25 1732 aa29.81■■■□□ 2.36
HDAC10-210ENST00000475965 REREQ9P2R6 1566 aa29.81■■■□□ 2.36
HDAC10-210ENST00000475965 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
HDAC10-210ENST00000475965 ABCA6Q8N139 1617 aa29.8■■■□□ 2.36
HDAC10-210ENST00000475965 MYT1LQ9UL68 1186 aa29.78■■■□□ 2.36
HDAC10-210ENST00000475965 MLH3Q9UHC1 1453 aa29.77■■■□□ 2.36
HDAC10-210ENST00000475965 TRAPPC8Q9Y2L5 1435 aa29.71■■■□□ 2.35
HDAC10-210ENST00000475965 KIDINS220Q9ULH0 1771 aa29.69■■■□□ 2.34
HDAC10-210ENST00000475965 SETD1BQ9UPS6 1966 aaKnown RBP29.69■■■□□ 2.34
HDAC10-210ENST00000475965 AGLP35573 1532 aa29.68■■■□□ 2.34
HDAC10-210ENST00000475965 CEBPAP49715 358 aaPredicted RBP29.67■■■□□ 2.34
HDAC10-210ENST00000475965 C3P01024 1663 aa29.66■■■□□ 2.34
HDAC10-210ENST00000475965 SAMD9LQ8IVG5 1584 aa29.64■■■□□ 2.33
HDAC10-210ENST00000475965 UHRF1BP1Q6BDS2 1440 aa29.62■■■□□ 2.33
HDAC10-210ENST00000475965 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
HDAC10-210ENST00000475965 GPATCH8Q9UKJ3 1502 aaKnown RBP29.59■■■□□ 2.33
HDAC10-210ENST00000475965 STRCQ7RTU9 1775 aa29.59■■■□□ 2.33
HDAC10-210ENST00000475965 ESF1Q9H501 851 aaKnown RBP29.56■■■□□ 2.32
HDAC10-210ENST00000475965 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
HDAC10-210ENST00000475965 CNTLNQ9NXG0 1405 aa29.53■■■□□ 2.32
HDAC10-210ENST00000475965 CERKQ8TCT0 537 aa29.52■■■□□ 2.32
HDAC10-210ENST00000475965 SUPT6HQ7KZ85 1726 aaKnown RBP29.51■■■□□ 2.32
HDAC10-210ENST00000475965 MROH2AA6NES4 1674 aa29.51■■■□□ 2.31
HDAC10-210ENST00000475965 PLEKHH2Q8IVE3 1493 aa29.51■■■□□ 2.31
HDAC10-210ENST00000475965 ATP7AQ04656 1500 aa29.5■■■□□ 2.31
HDAC10-210ENST00000475965 SPAG9O60271 1321 aaKnown RBP29.49■■■□□ 2.31
HDAC10-210ENST00000475965 INO80Q9ULG1 1556 aaPredicted RBP29.49■■■□□ 2.31
HDAC10-210ENST00000475965 CCNB3Q8WWL7 1395 aa29.49■■■□□ 2.31
HDAC10-210ENST00000475965 KIAA1107Q9UPP5 1409 aa29.48■■■□□ 2.31
HDAC10-210ENST00000475965 DMRT2Q9Y5R5 561 aa29.48■■■□□ 2.31
HDAC10-210ENST00000475965 MTUS2Q5JR59 1369 aa29.48■■■□□ 2.31
HDAC10-210ENST00000475965 HNRNPMP52272 730 aaKnown RBP eCLIP29.46■■■□□ 2.31
HDAC10-210ENST00000475965 CFDP1Q9UEE9 299 aaPredicted RBP29.46■■■□□ 2.31
HDAC10-210ENST00000475965 PLXNC1O60486 1568 aa29.43■■■□□ 2.3
HDAC10-210ENST00000475965 EHBP1L1Q8N3D4 1523 aa29.43■■■□□ 2.3
HDAC10-210ENST00000475965 TIAM1Q13009 1591 aa29.42■■■□□ 2.3
HDAC10-210ENST00000475965 CLTCQ00610 1675 aaKnown RBP29.4■■■□□ 2.3
HDAC10-210ENST00000475965 ADGBQ8N7X0 1667 aa29.4■■■□□ 2.3
HDAC10-210ENST00000475965 A2MP01023 1474 aa29.38■■■□□ 2.29
HDAC10-210ENST00000475965 PTPRTO14522 1441 aa29.37■■■□□ 2.29
HDAC10-210ENST00000475965 NPATQ14207 1427 aa29.37■■■□□ 2.29
HDAC10-210ENST00000475965 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
HDAC10-210ENST00000475965 NCOA1Q15788 1441 aa29.32■■■□□ 2.28
HDAC10-210ENST00000475965 ZMYM3Q14202 1370 aa29.32■■■□□ 2.28
HDAC10-210ENST00000475965 ZNF142P52746 1687 aaPredicted RBP29.29■■■□□ 2.28
HDAC10-210ENST00000475965 CAMSAP1Q5T5Y3 1602 aa29.29■■■□□ 2.28
HDAC10-210ENST00000475965 MYO3AQ8NEV4 1616 aa29.29■■■□□ 2.28
HDAC10-210ENST00000475965 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
HDAC10-210ENST00000475965 ZNF644Q9H582 1327 aaPredicted RBP29.27■■■□□ 2.28
HDAC10-210ENST00000475965 RTEL1-TNFRSF6BF6WH68 1400 aa29.23■■■□□ 2.27
HDAC10-210ENST00000475965 GGT6Q6P531 493 aa29.23■■■□□ 2.27
HDAC10-210ENST00000475965 LTBP4Q8N2S1 1624 aa29.22■■■□□ 2.27
HDAC10-210ENST00000475965 CEP170BQ9Y4F5 1589 aaPredicted RBP29.21■■■□□ 2.27
HDAC10-210ENST00000475965 PTPRKQ15262 1439 aa29.2■■■□□ 2.27
HDAC10-210ENST00000475965 PPP6R1Q9UPN7 881 aa29.2■■■□□ 2.26
HDAC10-210ENST00000475965 NCOA2Q15596 1464 aa29.2■■■□□ 2.26
HDAC10-210ENST00000475965 CCDC141Q6ZP82 1450 aa29.18■■■□□ 2.26
HDAC10-210ENST00000475965 CAMSAP2Q08AD1 1489 aa29.17■■■□□ 2.26
HDAC10-210ENST00000475965 IQSEC2Q5JU85 1478 aa29.16■■■□□ 2.26
HDAC10-210ENST00000475965 DHX29Q7Z478 1369 aaKnown RBP29.15■■■□□ 2.26
HDAC10-210ENST00000475965 PLA2R1Q13018 1463 aa29.15■■■□□ 2.26
HDAC10-210ENST00000475965 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
HDAC10-210ENST00000475965 NCKAP5LQ9HCH0 1330 aa29.1■■■□□ 2.25
HDAC10-210ENST00000475965 ARHGEF5Q12774 1597 aa29.09■■■□□ 2.25
HDAC10-210ENST00000475965 TCOF1Q13428 1488 aaKnown RBP29.09■■■□□ 2.25
HDAC10-210ENST00000475965 RSPH4AQ5TD94 716 aa29.08■■■□□ 2.25
HDAC10-210ENST00000475965 KDM5DQ9BY66 1539 aa29.08■■■□□ 2.25
HDAC10-210ENST00000475965 PKD2Q13563 968 aa29.07■■■□□ 2.24
HDAC10-210ENST00000475965 A2ML1A8K2U0 1454 aa29.06■■■□□ 2.24
HDAC10-210ENST00000475965 DNMT1P26358 1616 aaKnown RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms