RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 CCDC18Q5T9S5 1454 aa18.5■□□□□ 0.55
NUDCD3-206ENST00000475952 ZMYM4Q5VZL5 1548 aa18.49■□□□□ 0.55
NUDCD3-206ENST00000475952 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
NUDCD3-206ENST00000475952 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
NUDCD3-206ENST00000475952 FYCO1Q9BQS8 1478 aa18.48■□□□□ 0.55
NUDCD3-206ENST00000475952 FANCAO15360 1455 aa18.47■□□□□ 0.55
NUDCD3-206ENST00000475952 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
NUDCD3-206ENST00000475952 ZFYVE16Q7Z3T8 1539 aa18.45■□□□□ 0.54
NUDCD3-206ENST00000475952 AKNAQ7Z591 1439 aa18.44■□□□□ 0.54
NUDCD3-206ENST00000475952 CERKQ8TCT0 537 aa18.44■□□□□ 0.54
NUDCD3-206ENST00000475952 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
NUDCD3-206ENST00000475952 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
NUDCD3-206ENST00000475952 POGZQ7Z3K3 1410 aa18.43■□□□□ 0.54
NUDCD3-206ENST00000475952 YEATS2Q9ULM3 1422 aa18.42■□□□□ 0.54
NUDCD3-206ENST00000475952 CDC42BPBQ9Y5S2 1711 aa18.42■□□□□ 0.54
NUDCD3-206ENST00000475952 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
NUDCD3-206ENST00000475952 PLPPR3Q6T4P5 718 aa18.4■□□□□ 0.54
NUDCD3-206ENST00000475952 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
NUDCD3-206ENST00000475952 STRCQ7RTU9 1775 aa18.39■□□□□ 0.53
NUDCD3-206ENST00000475952 PLCH2O75038 1416 aa18.39■□□□□ 0.53
NUDCD3-206ENST00000475952 MAGI2Q86UL8 1455 aa18.38■□□□□ 0.53
NUDCD3-206ENST00000475952 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
NUDCD3-206ENST00000475952 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
NUDCD3-206ENST00000475952 ARHGAP5Q13017 1502 aa18.36■□□□□ 0.53
NUDCD3-206ENST00000475952 ILDR2Q71H61 639 aa18.35■□□□□ 0.53
NUDCD3-206ENST00000475952 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.53
NUDCD3-206ENST00000475952 ITSN2Q9NZM3 1697 aa18.31■□□□□ 0.52
NUDCD3-206ENST00000475952 MLECQ14165 292 aa18.31■□□□□ 0.52
NUDCD3-206ENST00000475952 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
NUDCD3-206ENST00000475952 SOCS7O14512 581 aa18.3■□□□□ 0.52
NUDCD3-206ENST00000475952 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
NUDCD3-206ENST00000475952 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
NUDCD3-206ENST00000475952 C9orf84Q5VXU9 1444 aa18.28■□□□□ 0.52
NUDCD3-206ENST00000475952 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
NUDCD3-206ENST00000475952 ATP10AO60312 1499 aa18.27■□□□□ 0.52
NUDCD3-206ENST00000475952 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.51
NUDCD3-206ENST00000475952 ABCC1P33527 1531 aa18.26■□□□□ 0.51
NUDCD3-206ENST00000475952 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
NUDCD3-206ENST00000475952 KDM5CP41229 1560 aa18.25■□□□□ 0.51
NUDCD3-206ENST00000475952 C3P01024 1663 aa18.23■□□□□ 0.51
NUDCD3-206ENST00000475952 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
NUDCD3-206ENST00000475952 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
NUDCD3-206ENST00000475952 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
NUDCD3-206ENST00000475952 CEBPAP49715 358 aaPredicted RBP18.21■□□□□ 0.51
NUDCD3-206ENST00000475952 UHRF1BP1Q6BDS2 1440 aa18.21■□□□□ 0.51
NUDCD3-206ENST00000475952 TIAM1Q13009 1591 aa18.2■□□□□ 0.5
NUDCD3-206ENST00000475952 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
NUDCD3-206ENST00000475952 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
NUDCD3-206ENST00000475952 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
NUDCD3-206ENST00000475952 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
NUDCD3-206ENST00000475952 LTBP4Q8N2S1 1624 aa18.18■□□□□ 0.5
NUDCD3-206ENST00000475952 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
NUDCD3-206ENST00000475952 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
NUDCD3-206ENST00000475952 ABCA6Q8N139 1617 aa18.17■□□□□ 0.5
NUDCD3-206ENST00000475952 PTPRTO14522 1441 aa18.16■□□□□ 0.5
NUDCD3-206ENST00000475952 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
NUDCD3-206ENST00000475952 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
NUDCD3-206ENST00000475952 CCNB3Q8WWL7 1395 aa18.14■□□□□ 0.49
NUDCD3-206ENST00000475952 IQSEC2Q5JU85 1478 aa18.13■□□□□ 0.49
NUDCD3-206ENST00000475952 PLEKHH2Q8IVE3 1493 aa18.13■□□□□ 0.49
NUDCD3-206ENST00000475952 MLH3Q9UHC1 1453 aa18.13■□□□□ 0.49
NUDCD3-206ENST00000475952 TRAPPC8Q9Y2L5 1435 aa18.11■□□□□ 0.49
NUDCD3-206ENST00000475952 INO80Q9ULG1 1556 aaPredicted RBP18.09■□□□□ 0.49
NUDCD3-206ENST00000475952 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
NUDCD3-206ENST00000475952 MYT1LQ9UL68 1186 aa18.09■□□□□ 0.49
NUDCD3-206ENST00000475952 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
NUDCD3-206ENST00000475952 AGLP35573 1532 aa18.08■□□□□ 0.49
NUDCD3-206ENST00000475952 MAP3K1Q13233 1512 aa18.08■□□□□ 0.49
NUDCD3-206ENST00000475952 NCOA2Q15596 1464 aa18.08■□□□□ 0.49
NUDCD3-206ENST00000475952 NCOA1Q15788 1441 aa18.08■□□□□ 0.49
NUDCD3-206ENST00000475952 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
NUDCD3-206ENST00000475952 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
NUDCD3-206ENST00000475952 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
NUDCD3-206ENST00000475952 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
NUDCD3-206ENST00000475952 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
NUDCD3-206ENST00000475952 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
NUDCD3-206ENST00000475952 CAMSAP1Q5T5Y3 1602 aa18.03■□□□□ 0.48
NUDCD3-206ENST00000475952 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
NUDCD3-206ENST00000475952 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
NUDCD3-206ENST00000475952 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.475e-6■■■■□ 20.3
NUDCD3-206ENST00000475952 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
NUDCD3-206ENST00000475952 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
NUDCD3-206ENST00000475952 CNTLNQ9NXG0 1405 aa17.98■□□□□ 0.47
NUDCD3-206ENST00000475952 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
NUDCD3-206ENST00000475952 ARHGEF5Q12774 1597 aa17.97■□□□□ 0.47
NUDCD3-206ENST00000475952 NPATQ14207 1427 aa17.97■□□□□ 0.47
NUDCD3-206ENST00000475952 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
NUDCD3-206ENST00000475952 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
NUDCD3-206ENST00000475952 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
NUDCD3-206ENST00000475952 CLTCQ00610 1675 aaKnown RBP17.95■□□□□ 0.46
NUDCD3-206ENST00000475952 APLP2Q06481 763 aa17.93■□□□□ 0.46
NUDCD3-206ENST00000475952 A2MP01023 1474 aa17.93■□□□□ 0.46
NUDCD3-206ENST00000475952 ZNF644Q9H582 1327 aaPredicted RBP17.93■□□□□ 0.46
NUDCD3-206ENST00000475952 ZNF335Q9H4Z2 1342 aaPredicted RBP17.92■□□□□ 0.46
NUDCD3-206ENST00000475952 RTEL1-TNFRSF6BF6WH68 1400 aa17.91■□□□□ 0.46
NUDCD3-206ENST00000475952 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
NUDCD3-206ENST00000475952 CEP170BQ9Y4F5 1589 aaPredicted RBP17.91■□□□□ 0.46
NUDCD3-206ENST00000475952 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
NUDCD3-206ENST00000475952 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
NUDCD3-206ENST00000475952 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms