RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
PRKD3-208ENST00000475912 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
PRKD3-208ENST00000475912 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
PRKD3-208ENST00000475912 C2orf72A6NCS6 295 aa13.01□□□□□ -0.33
PRKD3-208ENST00000475912 SNPHO15079 494 aa13.01□□□□□ -0.33
PRKD3-208ENST00000475912 KIF3CO14782 793 aa12.99□□□□□ -0.33
PRKD3-208ENST00000475912 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
PRKD3-208ENST00000475912 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
PRKD3-208ENST00000475912 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
PRKD3-208ENST00000475912 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
PRKD3-208ENST00000475912 ST18O60284 1047 aa12.96□□□□□ -0.33
PRKD3-208ENST00000475912 HOXB3P14651 431 aaPredicted RBP12.96□□□□□ -0.33
PRKD3-208ENST00000475912 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
PRKD3-208ENST00000475912 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
PRKD3-208ENST00000475912 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
PRKD3-208ENST00000475912 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
PRKD3-208ENST00000475912 ZNF710Q8N1W2 664 aa12.88□□□□□ -0.35
PRKD3-208ENST00000475912 CRISPLD2Q9H0B8 497 aa12.88□□□□□ -0.35
PRKD3-208ENST00000475912 FOXK1P85037 733 aa12.86□□□□□ -0.35
PRKD3-208ENST00000475912 DSG2Q14126 1118 aa12.86□□□□□ -0.35
PRKD3-208ENST00000475912 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
PRKD3-208ENST00000475912 PDE4AP27815 886 aa12.84□□□□□ -0.35
PRKD3-208ENST00000475912 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
PRKD3-208ENST00000475912 MARVELD3Q96A59 401 aa12.83□□□□□ -0.36
PRKD3-208ENST00000475912 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
PRKD3-208ENST00000475912 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
PRKD3-208ENST00000475912 HOXB1P14653 301 aaPredicted RBP12.79□□□□□ -0.36
PRKD3-208ENST00000475912 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
PRKD3-208ENST00000475912 EMP3P54852 163 aa12.77□□□□□ -0.37
PRKD3-208ENST00000475912 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
PRKD3-208ENST00000475912 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
PRKD3-208ENST00000475912 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
PRKD3-208ENST00000475912 SLC34A2O95436 690 aa12.76□□□□□ -0.37
PRKD3-208ENST00000475912 MFSD10Q14728 455 aa12.75□□□□□ -0.37
PRKD3-208ENST00000475912 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRKD3-208ENST00000475912 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
PRKD3-208ENST00000475912 MMRN1Q13201 1228 aa12.72□□□□□ -0.37
PRKD3-208ENST00000475912 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
PRKD3-208ENST00000475912 SPNS2Q8IVW8 549 aa12.71□□□□□ -0.37
PRKD3-208ENST00000475912 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
PRKD3-208ENST00000475912 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
PRKD3-208ENST00000475912 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
PRKD3-208ENST00000475912 NUDT7P0C024 238 aa12.68□□□□□ -0.38
PRKD3-208ENST00000475912 UPF1Q92900 1129 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRKD3-208ENST00000475912 ERBB3P21860 1342 aa12.66□□□□□ -0.38
PRKD3-208ENST00000475912 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
PRKD3-208ENST00000475912 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
PRKD3-208ENST00000475912 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
PRKD3-208ENST00000475912 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
PRKD3-208ENST00000475912 TBC1D12O60347 775 aa12.62□□□□□ -0.39
PRKD3-208ENST00000475912 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
PRKD3-208ENST00000475912 EMILIN3Q9NT22 766 aa12.62□□□□□ -0.39
PRKD3-208ENST00000475912 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
PRKD3-208ENST00000475912 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
PRKD3-208ENST00000475912 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
PRKD3-208ENST00000475912 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
PRKD3-208ENST00000475912 WDR70Q9NW82 654 aa12.58□□□□□ -0.4
PRKD3-208ENST00000475912 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
PRKD3-208ENST00000475912 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
PRKD3-208ENST00000475912 EVI5O60447 810 aa12.52□□□□□ -0.41
PRKD3-208ENST00000475912 E2F4Q16254 413 aa12.52□□□□□ -0.41
PRKD3-208ENST00000475912 DPYSL4O14531 572 aa12.51□□□□□ -0.41
PRKD3-208ENST00000475912 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
PRKD3-208ENST00000475912 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
PRKD3-208ENST00000475912 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
PRKD3-208ENST00000475912 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.41
PRKD3-208ENST00000475912 PSDA5PKW4 1024 aaPredicted RBP12.45□□□□□ -0.42
PRKD3-208ENST00000475912 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
PRKD3-208ENST00000475912 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
PRKD3-208ENST00000475912 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
PRKD3-208ENST00000475912 FOSBP53539 338 aa12.39□□□□□ -0.43
PRKD3-208ENST00000475912 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
PRKD3-208ENST00000475912 PDIA6Q15084 440 aa12.38□□□□□ -0.43
PRKD3-208ENST00000475912 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
PRKD3-208ENST00000475912 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
PRKD3-208ENST00000475912 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
PRKD3-208ENST00000475912 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
PRKD3-208ENST00000475912 PBX2P40425 430 aa12.35□□□□□ -0.43
PRKD3-208ENST00000475912 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
PRKD3-208ENST00000475912 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
PRKD3-208ENST00000475912 DDX12PQ92771 950 aa12.33□□□□□ -0.44
PRKD3-208ENST00000475912 ARHGAP33O14559 1287 aa12.32□□□□□ -0.44
PRKD3-208ENST00000475912 PSEN2P49810 448 aa12.32□□□□□ -0.44
PRKD3-208ENST00000475912 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
PRKD3-208ENST00000475912 PHF14O94880 888 aa12.31□□□□□ -0.44
PRKD3-208ENST00000475912 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
PRKD3-208ENST00000475912 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
PRKD3-208ENST00000475912 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
PRKD3-208ENST00000475912 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
PRKD3-208ENST00000475912 PTGER2P43116 358 aa12.3□□□□□ -0.44
PRKD3-208ENST00000475912 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
PRKD3-208ENST00000475912 P3H3Q8IVL6 736 aa12.3□□□□□ -0.44
PRKD3-208ENST00000475912 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
PRKD3-208ENST00000475912 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
PRKD3-208ENST00000475912 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
PRKD3-208ENST00000475912 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
PRKD3-208ENST00000475912 KCNH8Q96L42 1107 aa12.26□□□□□ -0.45
PRKD3-208ENST00000475912 EPAS1Q99814 870 aa12.26□□□□□ -0.45
PRKD3-208ENST00000475912 GRXCR2A6NFK2 248 aa12.25□□□□□ -0.45
PRKD3-208ENST00000475912 PTPREP23469 700 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms