RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
TOP2B-206ENST00000475717 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
TOP2B-206ENST00000475717 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
TOP2B-206ENST00000475717 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
TOP2B-206ENST00000475717 POTEMA6NI47 508 aa11.78□□□□□ -0.52
TOP2B-206ENST00000475717 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
TOP2B-206ENST00000475717 SNPHO15079 494 aa11.76□□□□□ -0.53
TOP2B-206ENST00000475717 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
TOP2B-206ENST00000475717 ST18O60284 1047 aa11.73□□□□□ -0.53
TOP2B-206ENST00000475717 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
TOP2B-206ENST00000475717 TMEM92Q6UXU6 159 aa11.71□□□□□ -0.53
TOP2B-206ENST00000475717 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
TOP2B-206ENST00000475717 PPP1R37O75864 691 aa11.68□□□□□ -0.54
TOP2B-206ENST00000475717 NBR1Q14596 966 aa11.64□□□□□ -0.55
TOP2B-206ENST00000475717 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
TOP2B-206ENST00000475717 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
TOP2B-206ENST00000475717 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
TOP2B-206ENST00000475717 DOK7Q18PE1 504 aa11.61□□□□□ -0.55
TOP2B-206ENST00000475717 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
TOP2B-206ENST00000475717 C2orf72A6NCS6 295 aa11.58□□□□□ -0.56
TOP2B-206ENST00000475717 EMP3P54852 163 aa11.57□□□□□ -0.56
TOP2B-206ENST00000475717 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
TOP2B-206ENST00000475717 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
TOP2B-206ENST00000475717 KIF3CO14782 793 aa11.52□□□□□ -0.57
TOP2B-206ENST00000475717 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
TOP2B-206ENST00000475717 PLSCR2Q9NRY7 297 aa11.5□□□□□ -0.57
TOP2B-206ENST00000475717 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
TOP2B-206ENST00000475717 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
TOP2B-206ENST00000475717 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
TOP2B-206ENST00000475717 HS3ST6Q96QI5 342 aa11.45□□□□□ -0.58
TOP2B-206ENST00000475717 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
TOP2B-206ENST00000475717 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
TOP2B-206ENST00000475717 P3H3Q8IVL6 736 aa11.44□□□□□ -0.58
TOP2B-206ENST00000475717 ERBB3P21860 1342 aa11.43□□□□□ -0.58
TOP2B-206ENST00000475717 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.58
TOP2B-206ENST00000475717 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
TOP2B-206ENST00000475717 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
TOP2B-206ENST00000475717 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
TOP2B-206ENST00000475717 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
TOP2B-206ENST00000475717 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
TOP2B-206ENST00000475717 DSG2Q14126 1118 aa11.4□□□□□ -0.58
TOP2B-206ENST00000475717 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
TOP2B-206ENST00000475717 WDR70Q9NW82 654 aa11.39□□□□□ -0.59
TOP2B-206ENST00000475717 FOXK1P85037 733 aa11.38□□□□□ -0.59
TOP2B-206ENST00000475717 VARS2Q5ST30 1063 aaKnown RBP11.38□□□□□ -0.59
TOP2B-206ENST00000475717 NUDT7P0C024 238 aa11.36□□□□□ -0.59
TOP2B-206ENST00000475717 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
TOP2B-206ENST00000475717 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
TOP2B-206ENST00000475717 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
TOP2B-206ENST00000475717 SLC34A2O95436 690 aa11.34□□□□□ -0.59
TOP2B-206ENST00000475717 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
TOP2B-206ENST00000475717 PDE4AP27815 886 aa11.33□□□□□ -0.6
TOP2B-206ENST00000475717 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
TOP2B-206ENST00000475717 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
TOP2B-206ENST00000475717 ZNF316A6NFI3 1004 aaPredicted RBP11.31□□□□□ -0.6
TOP2B-206ENST00000475717 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
TOP2B-206ENST00000475717 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
TOP2B-206ENST00000475717 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
TOP2B-206ENST00000475717 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
TOP2B-206ENST00000475717 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
TOP2B-206ENST00000475717 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
TOP2B-206ENST00000475717 TBC1D12O60347 775 aa11.24□□□□□ -0.61
TOP2B-206ENST00000475717 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
TOP2B-206ENST00000475717 MFSD10Q14728 455 aa11.22□□□□□ -0.61
TOP2B-206ENST00000475717 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
TOP2B-206ENST00000475717 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
TOP2B-206ENST00000475717 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
TOP2B-206ENST00000475717 E2F4Q16254 413 aa11.19□□□□□ -0.62
TOP2B-206ENST00000475717 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
TOP2B-206ENST00000475717 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
TOP2B-206ENST00000475717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
TOP2B-206ENST00000475717 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
TOP2B-206ENST00000475717 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
TOP2B-206ENST00000475717 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
TOP2B-206ENST00000475717 MAP3K9P80192 1104 aa11.13□□□□□ -0.63
TOP2B-206ENST00000475717 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
TOP2B-206ENST00000475717 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
TOP2B-206ENST00000475717 PPP4R3BQ5MIZ7 849 aa11.12□□□□□ -0.63
TOP2B-206ENST00000475717 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
TOP2B-206ENST00000475717 EVI5O60447 810 aa11.11□□□□□ -0.63
TOP2B-206ENST00000475717 PBX2P40425 430 aa11.1□□□□□ -0.63
TOP2B-206ENST00000475717 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
TOP2B-206ENST00000475717 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
TOP2B-206ENST00000475717 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
TOP2B-206ENST00000475717 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
TOP2B-206ENST00000475717 SEMA3EO15041 775 aa11.06□□□□□ -0.64
TOP2B-206ENST00000475717 DPYSL4O14531 572 aa11.05□□□□□ -0.64
TOP2B-206ENST00000475717 CAMK2BQ13554 666 aa11.05□□□□□ -0.64
TOP2B-206ENST00000475717 ARHGAP33O14559 1287 aa11.04□□□□□ -0.64
TOP2B-206ENST00000475717 PSEN2P49810 448 aa11.04□□□□□ -0.64
TOP2B-206ENST00000475717 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
TOP2B-206ENST00000475717 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
TOP2B-206ENST00000475717 FOSBP53539 338 aa11.02□□□□□ -0.65
TOP2B-206ENST00000475717 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
TOP2B-206ENST00000475717 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
TOP2B-206ENST00000475717 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
TOP2B-206ENST00000475717 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
TOP2B-206ENST00000475717 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
TOP2B-206ENST00000475717 ZC3H15Q8WU90 426 aaKnown RBP10.99□□□□□ -0.65
TOP2B-206ENST00000475717 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms