RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
RBM39-229ENST00000475651 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
RBM39-229ENST00000475651 POTEB3A0JP26 581 aa9.5□□□□□ -0.89
RBM39-229ENST00000475651 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
RBM39-229ENST00000475651 POTEBQ6S5H4 581 aa9.5□□□□□ -0.89
RBM39-229ENST00000475651 MS4A4AQ96JQ5 239 aa9.5□□□□□ -0.89
RBM39-229ENST00000475651 TMC2Q8TDI7 906 aa9.46□□□□□ -0.9
RBM39-229ENST00000475651 FBXO22Q8NEZ5 403 aa9.44□□□□□ -0.9
RBM39-229ENST00000475651 PTGER2P43116 358 aa9.43□□□□□ -0.9
RBM39-229ENST00000475651 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
RBM39-229ENST00000475651 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
RBM39-229ENST00000475651 MFRPQ9BY79 579 aa9.42□□□□□ -0.9
RBM39-229ENST00000475651 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
RBM39-229ENST00000475651 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
RBM39-229ENST00000475651 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
RBM39-229ENST00000475651 RGL2O15211 777 aa9.38□□□□□ -0.91
RBM39-229ENST00000475651 PKD2Q13563 968 aa9.38□□□□□ -0.91
RBM39-229ENST00000475651 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
RBM39-229ENST00000475651 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
RBM39-229ENST00000475651 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
RBM39-229ENST00000475651 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
RBM39-229ENST00000475651 PSDA5PKW4 1024 aaPredicted RBP9.34□□□□□ -0.91
RBM39-229ENST00000475651 PBX2P40425 430 aa9.34□□□□□ -0.91
RBM39-229ENST00000475651 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
RBM39-229ENST00000475651 SLC34A2O95436 690 aa9.32□□□□□ -0.92
RBM39-229ENST00000475651 KIF3CO14782 793 aa9.31□□□□□ -0.92
RBM39-229ENST00000475651 TBC1D12O60347 775 aa9.3□□□□□ -0.92
RBM39-229ENST00000475651 NUDT7P0C024 238 aa9.3□□□□□ -0.92
RBM39-229ENST00000475651 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
RBM39-229ENST00000475651 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
RBM39-229ENST00000475651 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.923e-17■□□□□ 9.2
RBM39-229ENST00000475651 HS6ST3Q8IZP7 471 aa9.28□□□□□ -0.92
RBM39-229ENST00000475651 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.921e-9■■■□□ 15.2
RBM39-229ENST00000475651 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
RBM39-229ENST00000475651 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
RBM39-229ENST00000475651 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
RBM39-229ENST00000475651 FOXK1P85037 733 aa9.21□□□□□ -0.94
RBM39-229ENST00000475651 PPP1R37O75864 691 aa9.2□□□□□ -0.94
RBM39-229ENST00000475651 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
RBM39-229ENST00000475651 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
RBM39-229ENST00000475651 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
RBM39-229ENST00000475651 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
RBM39-229ENST00000475651 PTCD2Q8WV60 388 aaKnown RBP9.19□□□□□ -0.94
RBM39-229ENST00000475651 AXIN2Q9Y2T1 843 aa9.16□□□□□ -0.94
RBM39-229ENST00000475651 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
RBM39-229ENST00000475651 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
RBM39-229ENST00000475651 ADGRD1Q6QNK2 874 aa9.13□□□□□ -0.95
RBM39-229ENST00000475651 TK2O00142 265 aa9.12□□□□□ -0.95
RBM39-229ENST00000475651 DSG2Q14126 1118 aa9.12□□□□□ -0.95
RBM39-229ENST00000475651 PDE4AP27815 886 aa9.11□□□□□ -0.95
RBM39-229ENST00000475651 DNAJC5Q9H3Z4 198 aa9.1□□□□□ -0.95
RBM39-229ENST00000475651 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
RBM39-229ENST00000475651 UPF1Q92900 1129 aaKnown RBP eCLIP9.07□□□□□ -0.96
RBM39-229ENST00000475651 KCNK17Q96T54 332 aa9.06□□□□□ -0.96
RBM39-229ENST00000475651 ZNF454Q8N9F8 522 aa9.05□□□□□ -0.96
RBM39-229ENST00000475651 PLA2G2EQ9NZK7 142 aa9.05□□□□□ -0.96
RBM39-229ENST00000475651 GOLGA8CPA6NN73 597 aa9.04□□□□□ -0.96
RBM39-229ENST00000475651 PSEN2P49810 448 aa9.04□□□□□ -0.96
RBM39-229ENST00000475651 POTEEQ6S8J3 1075 aa9.03□□□□□ -0.96
RBM39-229ENST00000475651 KDM4FA0A1W2PPD8 638 aa9.02□□□□□ -0.97
RBM39-229ENST00000475651 PTPREP23469 700 aa9.02□□□□□ -0.97
RBM39-229ENST00000475651 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
RBM39-229ENST00000475651 CRISPLD2Q9H0B8 497 aa9.02□□□□□ -0.97
RBM39-229ENST00000475651 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
RBM39-229ENST00000475651 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
RBM39-229ENST00000475651 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
RBM39-229ENST00000475651 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
RBM39-229ENST00000475651 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
RBM39-229ENST00000475651 LARP6Q9BRS8 491 aaKnown RBP8.99□□□□□ -0.97
RBM39-229ENST00000475651 BCL2L12Q9HB09 334 aa8.98□□□□□ -0.97
RBM39-229ENST00000475651 HRO43593 1189 aa8.97□□□□□ -0.97
RBM39-229ENST00000475651 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
RBM39-229ENST00000475651 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
RBM39-229ENST00000475651 EVI5O60447 810 aa8.96□□□□□ -0.98
RBM39-229ENST00000475651 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
RBM39-229ENST00000475651 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
RBM39-229ENST00000475651 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
RBM39-229ENST00000475651 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
RBM39-229ENST00000475651 FOSBP53539 338 aa8.94□□□□□ -0.98
RBM39-229ENST00000475651 GTPBP6O43824 516 aaPredicted RBP8.93□□□□□ -0.98
RBM39-229ENST00000475651 PTPN5P54829 565 aa8.93□□□□□ -0.98
RBM39-229ENST00000475651 NCKAP5LQ9HCH0 1330 aa8.92□□□□□ -0.98
RBM39-229ENST00000475651 ANO8Q9HCE9 1232 aaPredicted RBP8.91□□□□□ -0.98
RBM39-229ENST00000475651 WNT2BQ93097 391 aa8.9□□□□□ -0.98
RBM39-229ENST00000475651 FBXW7Q969H0 707 aa8.89□□□□□ -0.99
RBM39-229ENST00000475651 MFSD10Q14728 455 aa8.87□□□□□ -0.99
RBM39-229ENST00000475651 PPP1R3GB7ZBB8 358 aa8.86□□□□□ -0.99
RBM39-229ENST00000475651 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
RBM39-229ENST00000475651 TYW1BQ6NUM6 668 aa8.85□□□□□ -0.99
RBM39-229ENST00000475651 THSD4Q6ZMP0 1018 aa8.85□□□□□ -0.99
RBM39-229ENST00000475651 ANKK1Q8NFD2 765 aa8.85□□□□□ -0.99
RBM39-229ENST00000475651 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
RBM39-229ENST00000475651 PHF14O94880 888 aa8.83□□□□□ -1
RBM39-229ENST00000475651 EPAS1Q99814 870 aa8.83□□□□□ -1
RBM39-229ENST00000475651 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
RBM39-229ENST00000475651 RGS20O76081 388 aa8.82□□□□□ -1
RBM39-229ENST00000475651 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
RBM39-229ENST00000475651 LAPTM4BQ86VI4 370 aa8.8□□□□□ -1
RBM39-229ENST00000475651 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.8□□□□□ -1
RBM39-229ENST00000475651 IFFO2Q5TF58 517 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms