RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 ARHGAP5Q13017 1502 aa26.5■■□□□ 1.83
VPS8-222ENST00000475580 SCAPERQ9BY12 1400 aa26.49■■□□□ 1.83
VPS8-222ENST00000475580 ZMYM4Q5VZL5 1548 aa26.49■■□□□ 1.83
VPS8-222ENST00000475580 CDC42BPAQ5VT25 1732 aa26.48■■□□□ 1.83
VPS8-222ENST00000475580 POGZQ7Z3K3 1410 aa26.48■■□□□ 1.83
VPS8-222ENST00000475580 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
VPS8-222ENST00000475580 ARHGEF40Q8TER5 1519 aa26.44■■□□□ 1.82
VPS8-222ENST00000475580 MTUS2Q5JR59 1369 aa26.44■■□□□ 1.82
VPS8-222ENST00000475580 EHBP1L1Q8N3D4 1523 aa26.42■■□□□ 1.82
VPS8-222ENST00000475580 GPATCH8Q9UKJ3 1502 aaKnown RBP26.42■■□□□ 1.82
VPS8-222ENST00000475580 TIAM1Q13009 1591 aa26.39■■□□□ 1.82
VPS8-222ENST00000475580 ABCC1P33527 1531 aa26.39■■□□□ 1.81
VPS8-222ENST00000475580 YEATS2Q9ULM3 1422 aa26.39■■□□□ 1.81
VPS8-222ENST00000475580 MAGI2Q86UL8 1455 aa26.38■■□□□ 1.81
VPS8-222ENST00000475580 ZFYVE16Q7Z3T8 1539 aa26.38■■□□□ 1.81
VPS8-222ENST00000475580 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
VPS8-222ENST00000475580 KDM5CP41229 1560 aa26.36■■□□□ 1.81
VPS8-222ENST00000475580 ITSN2Q9NZM3 1697 aa26.35■■□□□ 1.81
VPS8-222ENST00000475580 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
VPS8-222ENST00000475580 SAMD9LQ8IVG5 1584 aa26.34■■□□□ 1.81
VPS8-222ENST00000475580 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.81
VPS8-222ENST00000475580 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.8
VPS8-222ENST00000475580 AFAP1Q8N556 730 aa26.32■■□□□ 1.8
VPS8-222ENST00000475580 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
VPS8-222ENST00000475580 ADAMTSL3P82987 1691 aa26.29■■□□□ 1.8
VPS8-222ENST00000475580 MAP3K1Q13233 1512 aa26.29■■□□□ 1.8
VPS8-222ENST00000475580 BCORL1Q5H9F3 1711 aa26.28■■□□□ 1.8
VPS8-222ENST00000475580 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
VPS8-222ENST00000475580 NCOA2Q15596 1464 aa26.27■■□□□ 1.8
VPS8-222ENST00000475580 HECW2Q9P2P5 1572 aa26.27■■□□□ 1.8
VPS8-222ENST00000475580 SYCP2Q9BX26 1530 aa26.26■■□□□ 1.79
VPS8-222ENST00000475580 LRRC9Q6ZRR7 1453 aa26.26■■□□□ 1.79
VPS8-222ENST00000475580 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
VPS8-222ENST00000475580 ZNF777Q9ULD5 760 aaPredicted RBP26.26■■□□□ 1.79
VPS8-222ENST00000475580 ATP10AO60312 1499 aa26.24■■□□□ 1.79
VPS8-222ENST00000475580 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
VPS8-222ENST00000475580 ARID4BQ4LE39 1312 aaPredicted RBP26.23■■□□□ 1.79
VPS8-222ENST00000475580 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
VPS8-222ENST00000475580 DIP2CQ9Y2E4 1556 aa26.22■■□□□ 1.79
VPS8-222ENST00000475580 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
VPS8-222ENST00000475580 C9orf84Q5VXU9 1444 aa26.21■■□□□ 1.79
VPS8-222ENST00000475580 ABCA6Q8N139 1617 aa26.21■■□□□ 1.79
VPS8-222ENST00000475580 KANK4Q5T7N3 995 aaPredicted RBP26.2■■□□□ 1.78
VPS8-222ENST00000475580 MADDQ8WXG6 1647 aa26.19■■□□□ 1.78
VPS8-222ENST00000475580 HNRNPMP52272 730 aaKnown RBP eCLIP26.19■■□□□ 1.78
VPS8-222ENST00000475580 KIDINS220Q9ULH0 1771 aa26.19■■□□□ 1.78
VPS8-222ENST00000475580 ZNF644Q9H582 1327 aaPredicted RBP26.17■■□□□ 1.78
VPS8-222ENST00000475580 REREQ9P2R6 1566 aa26.15■■□□□ 1.78
VPS8-222ENST00000475580 PTPRMP28827 1452 aa26.13■■□□□ 1.77
VPS8-222ENST00000475580 MBD5Q9P267 1494 aa26.13■■□□□ 1.77
VPS8-222ENST00000475580 MYT1LQ9UL68 1186 aa26.12■■□□□ 1.77
VPS8-222ENST00000475580 INO80Q9ULG1 1556 aaPredicted RBP26.11■■□□□ 1.77
VPS8-222ENST00000475580 RIMS1Q86UR5 1692 aaKnown RBP26.1■■□□□ 1.77
VPS8-222ENST00000475580 CAMSAP2Q08AD1 1489 aa26.1■■□□□ 1.77
VPS8-222ENST00000475580 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
VPS8-222ENST00000475580 SPAG9O60271 1321 aaKnown RBP26.08■■□□□ 1.77
VPS8-222ENST00000475580 AGLP35573 1532 aa26.06■■□□□ 1.76
VPS8-222ENST00000475580 MLECQ14165 292 aa26.06■■□□□ 1.76
VPS8-222ENST00000475580 FER1L4A9Z1Z3 1794 aa26.05■■□□□ 1.76
VPS8-222ENST00000475580 APLP2Q06481 763 aa26.03■■□□□ 1.76
VPS8-222ENST00000475580 MYOM3Q5VTT5 1437 aa26.03■■□□□ 1.76
VPS8-222ENST00000475580 CCDC141Q6ZP82 1450 aa26■■□□□ 1.75
VPS8-222ENST00000475580 PLXNC1O60486 1568 aa25.99■■□□□ 1.75
VPS8-222ENST00000475580 ARHGEF5Q12774 1597 aa25.99■■□□□ 1.75
VPS8-222ENST00000475580 MIA2Q96PC5 1412 aa25.98■■□□□ 1.75
VPS8-222ENST00000475580 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
VPS8-222ENST00000475580 A2MP01023 1474 aa25.95■■□□□ 1.74
VPS8-222ENST00000475580 ADGBQ8N7X0 1667 aa25.95■■□□□ 1.74
VPS8-222ENST00000475580 RSPH4AQ5TD94 716 aa25.93■■□□□ 1.74
VPS8-222ENST00000475580 PTPN23Q9H3S7 1636 aa25.88■■□□□ 1.73
VPS8-222ENST00000475580 MAST1Q9Y2H9 1570 aa25.86■■□□□ 1.73
VPS8-222ENST00000475580 PLPPR3Q6T4P5 718 aa25.86■■□□□ 1.73
VPS8-222ENST00000475580 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
VPS8-222ENST00000475580 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
VPS8-222ENST00000475580 TCOF1Q13428 1488 aaKnown RBP25.84■■□□□ 1.73
VPS8-222ENST00000475580 LMTK3Q96Q04 1460 aa25.84■■□□□ 1.73
VPS8-222ENST00000475580 CEBPAP49715 358 aaPredicted RBP25.83■■□□□ 1.73
VPS8-222ENST00000475580 TSPY4P0CV99 314 aa25.82■■□□□ 1.72
VPS8-222ENST00000475580 TSPY10P0CW01 314 aa25.82■■□□□ 1.72
VPS8-222ENST00000475580 C3P01024 1663 aa25.82■■□□□ 1.72
VPS8-222ENST00000475580 CNTLNQ9NXG0 1405 aa25.8■■□□□ 1.72
VPS8-222ENST00000475580 CROCC2H7BZ55 1655 aa25.79■■□□□ 1.72
VPS8-222ENST00000475580 ABCC5O15440 1437 aa25.78■■□□□ 1.72
VPS8-222ENST00000475580 MROH2AA6NES4 1674 aa25.77■■□□□ 1.72
VPS8-222ENST00000475580 DNMT1P26358 1616 aaKnown RBP25.76■■□□□ 1.71
VPS8-222ENST00000475580 CLTCQ00610 1675 aaKnown RBP25.75■■□□□ 1.71
VPS8-222ENST00000475580 SHANK2Q9UPX8 1470 aa25.75■■□□□ 1.71
VPS8-222ENST00000475580 GGT6Q6P531 493 aa25.74■■□□□ 1.71
VPS8-222ENST00000475580 ESF1Q9H501 851 aaKnown RBP25.74■■□□□ 1.71
VPS8-222ENST00000475580 DAPK1P53355 1430 aa25.73■■□□□ 1.71
VPS8-222ENST00000475580 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
VPS8-222ENST00000475580 ZMYM3Q14202 1370 aa25.7■■□□□ 1.71
VPS8-222ENST00000475580 KIF3BO15066 747 aa25.7■■□□□ 1.7
VPS8-222ENST00000475580 PPP6R1Q9UPN7 881 aa25.69■■□□□ 1.7
VPS8-222ENST00000475580 SETD1BQ9UPS6 1966 aaKnown RBP25.69■■□□□ 1.7
VPS8-222ENST00000475580 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
VPS8-222ENST00000475580 HSPA2P54652 639 aa25.66■■□□□ 1.7
VPS8-222ENST00000475580 DUOX2Q9NRD8 1548 aa25.66■■□□□ 1.7
VPS8-222ENST00000475580 RNF17Q9BXT8 1623 aaKnown RBP25.66■■□□□ 1.7
VPS8-222ENST00000475580 FAM135AQ9P2D6 1515 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms