RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 EMILIN3Q9NT22 766 aa10.99□□□□□ -0.65
SDHB-205ENST00000475506 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
SDHB-205ENST00000475506 TIE1P35590 1138 aa10.97□□□□□ -0.65
SDHB-205ENST00000475506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
SDHB-205ENST00000475506 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
SDHB-205ENST00000475506 DPYSL4O14531 572 aa10.95□□□□□ -0.66
SDHB-205ENST00000475506 DSG2Q14126 1118 aa10.95□□□□□ -0.66
SDHB-205ENST00000475506 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
SDHB-205ENST00000475506 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
SDHB-205ENST00000475506 AK7Q96M32 723 aa10.94□□□□□ -0.66
SDHB-205ENST00000475506 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
SDHB-205ENST00000475506 ARXQ96QS3 562 aa10.93□□□□□ -0.66
SDHB-205ENST00000475506 PDIA6Q15084 440 aa10.9□□□□□ -0.66
SDHB-205ENST00000475506 MICALL2Q8IY33 904 aa10.9□□□□□ -0.66
SDHB-205ENST00000475506 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
SDHB-205ENST00000475506 PDCD7Q8N8D1 485 aaKnown RBP10.88□□□□□ -0.67
SDHB-205ENST00000475506 SPDYE16A6NNV3 312 aaPredicted RBP10.87□□□□□ -0.67
SDHB-205ENST00000475506 GPR37O15354 613 aa10.87□□□□□ -0.67
SDHB-205ENST00000475506 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
SDHB-205ENST00000475506 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
SDHB-205ENST00000475506 TRIM66O15016 1216 aa10.86□□□□□ -0.67
SDHB-205ENST00000475506 FOXK1P85037 733 aa10.86□□□□□ -0.67
SDHB-205ENST00000475506 KDM4CQ9H3R0 1056 aa10.85□□□□□ -0.67
SDHB-205ENST00000475506 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
SDHB-205ENST00000475506 SUPT5HO00267 1087 aaKnown RBP10.82□□□□□ -0.68
SDHB-205ENST00000475506 PDE4DQ08499 809 aa10.82□□□□□ -0.68
SDHB-205ENST00000475506 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
SDHB-205ENST00000475506 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
SDHB-205ENST00000475506 TMEM121BQ9BXQ6 578 aaPredicted RBP10.81□□□□□ -0.68
SDHB-205ENST00000475506 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
SDHB-205ENST00000475506 KIF3CO14782 793 aa10.8□□□□□ -0.68
SDHB-205ENST00000475506 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
SDHB-205ENST00000475506 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
SDHB-205ENST00000475506 GRXCR2A6NFK2 248 aa10.75□□□□□ -0.69
SDHB-205ENST00000475506 EVX2Q03828 476 aa10.75□□□□□ -0.69
SDHB-205ENST00000475506 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
SDHB-205ENST00000475506 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
SDHB-205ENST00000475506 ATMINO43313 823 aaPredicted RBP10.73□□□□□ -0.69
SDHB-205ENST00000475506 OSBPP22059 807 aa10.73□□□□□ -0.69
SDHB-205ENST00000475506 FAM117AQ9C073 453 aa10.73□□□□□ -0.69
SDHB-205ENST00000475506 OCEL1Q9H607 264 aa10.73□□□□□ -0.69
SDHB-205ENST00000475506 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
SDHB-205ENST00000475506 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
SDHB-205ENST00000475506 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
SDHB-205ENST00000475506 MINK1Q8N4C8 1332 aaPredicted RBP10.71□□□□□ -0.69
SDHB-205ENST00000475506 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
SDHB-205ENST00000475506 CCDC102AQ96A19 550 aa10.71□□□□□ -0.69
SDHB-205ENST00000475506 FECHP22830 423 aa10.7□□□□□ -0.7
SDHB-205ENST00000475506 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
SDHB-205ENST00000475506 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
SDHB-205ENST00000475506 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
SDHB-205ENST00000475506 ASTLQ6HA08 431 aaPredicted RBP10.69□□□□□ -0.7
SDHB-205ENST00000475506 OXER1Q8TDS5 423 aa10.69□□□□□ -0.7
SDHB-205ENST00000475506 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
SDHB-205ENST00000475506 IRF6O14896 467 aa10.68□□□□□ -0.7
SDHB-205ENST00000475506 IER5LQ5T953 404 aa10.68□□□□□ -0.7
SDHB-205ENST00000475506 PTGER2P43116 358 aa10.67□□□□□ -0.7
SDHB-205ENST00000475506 GNPATO15228 680 aa10.66□□□□□ -0.7
SDHB-205ENST00000475506 AMHR2Q16671 573 aa10.66□□□□□ -0.7
SDHB-205ENST00000475506 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
SDHB-205ENST00000475506 DDX12PQ92771 950 aa10.66□□□□□ -0.7
SDHB-205ENST00000475506 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
SDHB-205ENST00000475506 ZMYND15Q9H091 742 aa10.63□□□□□ -0.71
SDHB-205ENST00000475506 G3V3G9 751 aa10.62□□□□□ -0.71
SDHB-205ENST00000475506 HAX1O00165 279 aa10.62□□□□□ -0.71
SDHB-205ENST00000475506 PLCG2P16885 1265 aa10.62□□□□□ -0.71
SDHB-205ENST00000475506 HIC1Q14526 733 aa10.62□□□□□ -0.71
SDHB-205ENST00000475506 FCHSD2O94868 740 aa10.61□□□□□ -0.71
SDHB-205ENST00000475506 CLCN6P51797 869 aa10.61□□□□□ -0.71
SDHB-205ENST00000475506 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
SDHB-205ENST00000475506 EVI5O60447 810 aa10.59□□□□□ -0.71
SDHB-205ENST00000475506 PTGDRQ13258 359 aa10.59□□□□□ -0.71
SDHB-205ENST00000475506 PELP1Q8IZL8 1130 aaKnown RBP10.59□□□□□ -0.71
SDHB-205ENST00000475506 L3MBTL3Q96JM7 780 aaPredicted RBP10.59□□□□□ -0.71
SDHB-205ENST00000475506 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
SDHB-205ENST00000475506 TBC1D12O60347 775 aa10.55□□□□□ -0.72
SDHB-205ENST00000475506 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SDHB-205ENST00000475506 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
SDHB-205ENST00000475506 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
SDHB-205ENST00000475506 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
SDHB-205ENST00000475506 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
SDHB-205ENST00000475506 MS4A1P11836 297 aa10.52□□□□□ -0.73
SDHB-205ENST00000475506 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
SDHB-205ENST00000475506 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
SDHB-205ENST00000475506 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
SDHB-205ENST00000475506 GIGYF2Q6Y7W6 1299 aaKnown RBP10.51□□□□□ -0.73
SDHB-205ENST00000475506 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
SDHB-205ENST00000475506 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
SDHB-205ENST00000475506 SEC24BO95487 1268 aa10.49□□□□□ -0.73
SDHB-205ENST00000475506 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
SDHB-205ENST00000475506 GABBR2O75899 941 aa10.48□□□□□ -0.73
SDHB-205ENST00000475506 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
SDHB-205ENST00000475506 GOPCQ9HD26 462 aa10.48□□□□□ -0.73
SDHB-205ENST00000475506 EN1Q05925 392 aaPredicted RBP10.47□□□□□ -0.73
SDHB-205ENST00000475506 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
SDHB-205ENST00000475506 SLC34A2O95436 690 aa10.46□□□□□ -0.73
SDHB-205ENST00000475506 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
SDHB-205ENST00000475506 PHF14O94880 888 aa10.43□□□□□ -0.74
SDHB-205ENST00000475506 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
SDHB-205ENST00000475506 MAP3K7O43318 606 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms