RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
ITGA6-210ENST00000475302 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
ITGA6-210ENST00000475302 SHROOM2Q13796 1616 aa14.87□□□□□ -0.03
ITGA6-210ENST00000475302 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
ITGA6-210ENST00000475302 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
ITGA6-210ENST00000475302 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
ITGA6-210ENST00000475302 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
ITGA6-210ENST00000475302 EPRSP07814 1512 aaKnown RBP14.81□□□□□ -0.04
ITGA6-210ENST00000475302 NUP153P49790 1475 aaKnown RBP14.8□□□□□ -0.04
ITGA6-210ENST00000475302 CCDC18Q5T9S5 1454 aa14.8□□□□□ -0.04
ITGA6-210ENST00000475302 MAGI3Q5TCQ9 1506 aa14.8□□□□□ -0.04
ITGA6-210ENST00000475302 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
ITGA6-210ENST00000475302 RAPGEF6Q8TEU7 1601 aa14.78□□□□□ -0.04
ITGA6-210ENST00000475302 PHLDB1Q86UU1 1377 aa14.78□□□□□ -0.04
ITGA6-210ENST00000475302 HAX1O00165 279 aa14.78□□□□□ -0.04
ITGA6-210ENST00000475302 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
ITGA6-210ENST00000475302 ABCA8O94911 1581 aa14.77□□□□□ -0.04
ITGA6-210ENST00000475302 ARHGEF11O15085 1522 aa14.77□□□□□ -0.04
ITGA6-210ENST00000475302 HRCP23327 699 aa14.77□□□□□ -0.05
ITGA6-210ENST00000475302 PLB1Q6P1J6 1458 aa14.76□□□□□ -0.05
ITGA6-210ENST00000475302 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
ITGA6-210ENST00000475302 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
ITGA6-210ENST00000475302 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
ITGA6-210ENST00000475302 CDK13Q14004 1512 aaKnown RBP14.73□□□□□ -0.05
ITGA6-210ENST00000475302 EHBP1L1Q8N3D4 1523 aa14.73□□□□□ -0.05
ITGA6-210ENST00000475302 EVX2Q03828 476 aa14.71□□□□□ -0.05
ITGA6-210ENST00000475302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.06
ITGA6-210ENST00000475302 NCOA2Q15596 1464 aa14.7□□□□□ -0.06
ITGA6-210ENST00000475302 MTUS2Q5JR59 1369 aa14.7□□□□□ -0.06
ITGA6-210ENST00000475302 PTPRGP23470 1445 aa14.69□□□□□ -0.06
ITGA6-210ENST00000475302 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
ITGA6-210ENST00000475302 SUPT6HQ7KZ85 1726 aaKnown RBP14.67□□□□□ -0.06
ITGA6-210ENST00000475302 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
ITGA6-210ENST00000475302 MIER1Q8N108 512 aa14.67□□□□□ -0.06
ITGA6-210ENST00000475302 ATP10BO94823 1461 aa14.67□□□□□ -0.06
ITGA6-210ENST00000475302 MYOM3Q5VTT5 1437 aa14.65□□□□□ -0.06
ITGA6-210ENST00000475302 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
ITGA6-210ENST00000475302 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
ITGA6-210ENST00000475302 UACAQ9BZF9 1416 aa14.64□□□□□ -0.07
ITGA6-210ENST00000475302 TROQ12816 1431 aaPredicted RBP14.63□□□□□ -0.07
ITGA6-210ENST00000475302 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
ITGA6-210ENST00000475302 ADCY10Q96PN6 1610 aa14.61□□□□□ -0.07
ITGA6-210ENST00000475302 UHRF1BP1LA0JNW5 1464 aa14.61□□□□□ -0.07
ITGA6-210ENST00000475302 TCOF1Q13428 1488 aaKnown RBP14.61□□□□□ -0.07
ITGA6-210ENST00000475302 ARID3CA6NKF2 412 aa14.6□□□□□ -0.07
ITGA6-210ENST00000475302 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
ITGA6-210ENST00000475302 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
ITGA6-210ENST00000475302 CDK11AQ9UQ88 783 aaPredicted RBP14.58□□□□□ -0.08
ITGA6-210ENST00000475302 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
ITGA6-210ENST00000475302 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
ITGA6-210ENST00000475302 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
ITGA6-210ENST00000475302 PTPRKQ15262 1439 aa14.56□□□□□ -0.08
ITGA6-210ENST00000475302 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
ITGA6-210ENST00000475302 KDM5BQ9UGL1 1544 aa14.55□□□□□ -0.08
ITGA6-210ENST00000475302 KIF14Q15058 1648 aa14.55□□□□□ -0.08
ITGA6-210ENST00000475302 GPATCH8Q9UKJ3 1502 aaKnown RBP14.54□□□□□ -0.08
ITGA6-210ENST00000475302 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
ITGA6-210ENST00000475302 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
ITGA6-210ENST00000475302 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
ITGA6-210ENST00000475302 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
ITGA6-210ENST00000475302 FAM50AQ14320 339 aaKnown RBP14.52□□□□□ -0.09
ITGA6-210ENST00000475302 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
ITGA6-210ENST00000475302 CCER1Q8TC90 406 aaPredicted RBP14.48□□□□□ -0.09
ITGA6-210ENST00000475302 SETD5Q9C0A6 1442 aa14.48□□□□□ -0.09
ITGA6-210ENST00000475302 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
ITGA6-210ENST00000475302 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
ITGA6-210ENST00000475302 ITGAEP38570 1179 aa14.46□□□□□ -0.09
ITGA6-210ENST00000475302 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.1
ITGA6-210ENST00000475302 RAB3GAP2Q9H2M9 1393 aa14.46□□□□□ -0.1
ITGA6-210ENST00000475302 ITSN2Q9NZM3 1697 aa14.46□□□□□ -0.1
ITGA6-210ENST00000475302 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
ITGA6-210ENST00000475302 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
ITGA6-210ENST00000475302 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
ITGA6-210ENST00000475302 ABCC5O15440 1437 aa14.43□□□□□ -0.1
ITGA6-210ENST00000475302 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
ITGA6-210ENST00000475302 DNMT1P26358 1616 aaKnown RBP14.43□□□□□ -0.1
ITGA6-210ENST00000475302 NAIPQ13075 1403 aa14.42□□□□□ -0.1
ITGA6-210ENST00000475302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.42□□□□□ -0.1
ITGA6-210ENST00000475302 DAPK1P53355 1430 aa14.41□□□□□ -0.1
ITGA6-210ENST00000475302 CAMSAP2Q08AD1 1489 aa14.41□□□□□ -0.1
ITGA6-210ENST00000475302 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
ITGA6-210ENST00000475302 CFDP1Q9UEE9 299 aaPredicted RBP14.4□□□□□ -0.1
ITGA6-210ENST00000475302 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
ITGA6-210ENST00000475302 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
ITGA6-210ENST00000475302 CDC42BPBQ9Y5S2 1711 aa14.39□□□□□ -0.11
ITGA6-210ENST00000475302 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
ITGA6-210ENST00000475302 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
ITGA6-210ENST00000475302 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
ITGA6-210ENST00000475302 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
ITGA6-210ENST00000475302 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
ITGA6-210ENST00000475302 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
ITGA6-210ENST00000475302 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
ITGA6-210ENST00000475302 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
ITGA6-210ENST00000475302 SAMD9LQ8IVG5 1584 aa14.35□□□□□ -0.11
ITGA6-210ENST00000475302 NUBP1P53384 320 aa14.35□□□□□ -0.11
ITGA6-210ENST00000475302 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
ITGA6-210ENST00000475302 ADGRL2O95490 1459 aa14.35□□□□□ -0.11
ITGA6-210ENST00000475302 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
ITGA6-210ENST00000475302 PLCH2O75038 1416 aa14.34□□□□□ -0.11
ITGA6-210ENST00000475302 WDR7Q9Y4E6 1490 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms