RNA–Protein interactions for RNA: ENST00000475237.5

CACNA2D1-209, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 3

Gene CACNA2D1, Length 419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-209ENST00000475237 ERBB3P21860 1342 aa13.05□□□□□ -0.32
CACNA2D1-209ENST00000475237 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
CACNA2D1-209ENST00000475237 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
CACNA2D1-209ENST00000475237 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
CACNA2D1-209ENST00000475237 NLRP6P59044 892 aa12.98□□□□□ -0.33
CACNA2D1-209ENST00000475237 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
CACNA2D1-209ENST00000475237 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
CACNA2D1-209ENST00000475237 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
CACNA2D1-209ENST00000475237 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
CACNA2D1-209ENST00000475237 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
CACNA2D1-209ENST00000475237 STK25O00506 426 aa12.88□□□□□ -0.35
CACNA2D1-209ENST00000475237 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
CACNA2D1-209ENST00000475237 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
CACNA2D1-209ENST00000475237 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
CACNA2D1-209ENST00000475237 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
CACNA2D1-209ENST00000475237 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
CACNA2D1-209ENST00000475237 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
CACNA2D1-209ENST00000475237 KIF3CO14782 793 aa12.77□□□□□ -0.37
CACNA2D1-209ENST00000475237 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
CACNA2D1-209ENST00000475237 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
CACNA2D1-209ENST00000475237 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
CACNA2D1-209ENST00000475237 RGL2O15211 777 aa12.75□□□□□ -0.37
CACNA2D1-209ENST00000475237 PKD2Q13563 968 aa12.75□□□□□ -0.37
CACNA2D1-209ENST00000475237 PTGER2P43116 358 aa12.74□□□□□ -0.37
CACNA2D1-209ENST00000475237 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
CACNA2D1-209ENST00000475237 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
CACNA2D1-209ENST00000475237 SLC34A2O95436 690 aa12.68□□□□□ -0.38
CACNA2D1-209ENST00000475237 NUDT7P0C024 238 aa12.68□□□□□ -0.38
CACNA2D1-209ENST00000475237 LSM11P83369 360 aaKnown RBP eCLIP12.65□□□□□ -0.38
CACNA2D1-209ENST00000475237 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
CACNA2D1-209ENST00000475237 PBX2P40425 430 aa12.63□□□□□ -0.39
CACNA2D1-209ENST00000475237 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
CACNA2D1-209ENST00000475237 PPP1R37O75864 691 aa12.61□□□□□ -0.39
CACNA2D1-209ENST00000475237 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
CACNA2D1-209ENST00000475237 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
CACNA2D1-209ENST00000475237 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
CACNA2D1-209ENST00000475237 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
CACNA2D1-209ENST00000475237 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
CACNA2D1-209ENST00000475237 FOXK1P85037 733 aa12.5□□□□□ -0.41
CACNA2D1-209ENST00000475237 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
CACNA2D1-209ENST00000475237 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
CACNA2D1-209ENST00000475237 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
CACNA2D1-209ENST00000475237 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
CACNA2D1-209ENST00000475237 TBC1D12O60347 775 aa12.44□□□□□ -0.42
CACNA2D1-209ENST00000475237 ADGRD1Q6QNK2 874 aa12.44□□□□□ -0.42
CACNA2D1-209ENST00000475237 DSG2Q14126 1118 aa12.42□□□□□ -0.42
CACNA2D1-209ENST00000475237 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
CACNA2D1-209ENST00000475237 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
CACNA2D1-209ENST00000475237 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
CACNA2D1-209ENST00000475237 TK2O00142 265 aa12.39□□□□□ -0.43
CACNA2D1-209ENST00000475237 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
CACNA2D1-209ENST00000475237 PSEN2P49810 448 aa12.36□□□□□ -0.43
CACNA2D1-209ENST00000475237 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
CACNA2D1-209ENST00000475237 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
CACNA2D1-209ENST00000475237 HRO43593 1189 aa12.33□□□□□ -0.44
CACNA2D1-209ENST00000475237 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
CACNA2D1-209ENST00000475237 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
CACNA2D1-209ENST00000475237 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
CACNA2D1-209ENST00000475237 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
CACNA2D1-209ENST00000475237 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
CACNA2D1-209ENST00000475237 KCNK17Q96T54 332 aa12.28□□□□□ -0.44
CACNA2D1-209ENST00000475237 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
CACNA2D1-209ENST00000475237 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
CACNA2D1-209ENST00000475237 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
CACNA2D1-209ENST00000475237 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
CACNA2D1-209ENST00000475237 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
CACNA2D1-209ENST00000475237 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
CACNA2D1-209ENST00000475237 PDE4AP27815 886 aa12.22□□□□□ -0.45
CACNA2D1-209ENST00000475237 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.45
CACNA2D1-209ENST00000475237 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
CACNA2D1-209ENST00000475237 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
CACNA2D1-209ENST00000475237 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
CACNA2D1-209ENST00000475237 FOSBP53539 338 aa12.17□□□□□ -0.46
CACNA2D1-209ENST00000475237 PTPREP23469 700 aa12.16□□□□□ -0.46
CACNA2D1-209ENST00000475237 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
CACNA2D1-209ENST00000475237 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
CACNA2D1-209ENST00000475237 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
CACNA2D1-209ENST00000475237 EVI5O60447 810 aa12.12□□□□□ -0.47
CACNA2D1-209ENST00000475237 DDX27Q96GQ7 796 aaKnown RBP12.12□□□□□ -0.47
CACNA2D1-209ENST00000475237 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
CACNA2D1-209ENST00000475237 PTPN5P54829 565 aa12.11□□□□□ -0.47
CACNA2D1-209ENST00000475237 BHMG1C9JSJ3 638 aaPredicted RBP12.1□□□□□ -0.47
CACNA2D1-209ENST00000475237 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
CACNA2D1-209ENST00000475237 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
CACNA2D1-209ENST00000475237 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
CACNA2D1-209ENST00000475237 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
CACNA2D1-209ENST00000475237 MFSD10Q14728 455 aa12.06□□□□□ -0.48
CACNA2D1-209ENST00000475237 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
CACNA2D1-209ENST00000475237 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
CACNA2D1-209ENST00000475237 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
CACNA2D1-209ENST00000475237 WNT2BQ93097 391 aa12.04□□□□□ -0.48
CACNA2D1-209ENST00000475237 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
CACNA2D1-209ENST00000475237 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
CACNA2D1-209ENST00000475237 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
CACNA2D1-209ENST00000475237 IFFO2Q5TF58 517 aa12□□□□□ -0.49
CACNA2D1-209ENST00000475237 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
CACNA2D1-209ENST00000475237 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
CACNA2D1-209ENST00000475237 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
CACNA2D1-209ENST00000475237 RGS20O76081 388 aa11.96□□□□□ -0.49
CACNA2D1-209ENST00000475237 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms