RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 ZMYM4Q5VZL5 1548 aa21.91■■□□□ 1.1
SPCS1-204ENST00000474945 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
SPCS1-204ENST00000474945 PREX2Q70Z35 1606 aa21.89■■□□□ 1.09
SPCS1-204ENST00000474945 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.09
SPCS1-204ENST00000474945 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
SPCS1-204ENST00000474945 ZFYVE16Q7Z3T8 1539 aa21.87■■□□□ 1.09
SPCS1-204ENST00000474945 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.09
SPCS1-204ENST00000474945 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
SPCS1-204ENST00000474945 MAGI2Q86UL8 1455 aa21.82■■□□□ 1.08
SPCS1-204ENST00000474945 ARID4BQ4LE39 1312 aaPredicted RBP21.81■■□□□ 1.08
SPCS1-204ENST00000474945 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
SPCS1-204ENST00000474945 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
SPCS1-204ENST00000474945 ZNF518AQ6AHZ1 1483 aa21.81■■□□□ 1.08
SPCS1-204ENST00000474945 CDC42BPAQ5VT25 1732 aa21.8■■□□□ 1.08
SPCS1-204ENST00000474945 ABCC1P33527 1531 aa21.8■■□□□ 1.08
SPCS1-204ENST00000474945 EHBP1L1Q8N3D4 1523 aa21.8■■□□□ 1.08
SPCS1-204ENST00000474945 BCORL1Q5H9F3 1711 aa21.77■■□□□ 1.08
SPCS1-204ENST00000474945 KDM5CP41229 1560 aa21.77■■□□□ 1.08
SPCS1-204ENST00000474945 ADAMTSL3P82987 1691 aa21.76■■□□□ 1.07
SPCS1-204ENST00000474945 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
SPCS1-204ENST00000474945 HECW2Q9P2P5 1572 aa21.75■■□□□ 1.07
SPCS1-204ENST00000474945 MADDQ8WXG6 1647 aa21.74■■□□□ 1.07
SPCS1-204ENST00000474945 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
SPCS1-204ENST00000474945 GPATCH8Q9UKJ3 1502 aaKnown RBP21.73■■□□□ 1.07
SPCS1-204ENST00000474945 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
SPCS1-204ENST00000474945 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
SPCS1-204ENST00000474945 SAMD9LQ8IVG5 1584 aa21.72■■□□□ 1.07
SPCS1-204ENST00000474945 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
SPCS1-204ENST00000474945 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
SPCS1-204ENST00000474945 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.07
SPCS1-204ENST00000474945 AFAP1Q8N556 730 aa21.7■■□□□ 1.06
SPCS1-204ENST00000474945 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
SPCS1-204ENST00000474945 ZNF777Q9ULD5 760 aaPredicted RBP21.7■■□□□ 1.06
SPCS1-204ENST00000474945 TRAPPC8Q9Y2L5 1435 aa21.7■■□□□ 1.06
SPCS1-204ENST00000474945 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
SPCS1-204ENST00000474945 ATP10AO60312 1499 aa21.69■■□□□ 1.06
SPCS1-204ENST00000474945 PTPRMP28827 1452 aa21.69■■□□□ 1.06
SPCS1-204ENST00000474945 DIP2CQ9Y2E4 1556 aa21.68■■□□□ 1.06
SPCS1-204ENST00000474945 RIMS1Q86UR5 1692 aaKnown RBP21.67■■□□□ 1.06
SPCS1-204ENST00000474945 ABCA6Q8N139 1617 aa21.66■■□□□ 1.06
SPCS1-204ENST00000474945 FOXD1Q16676 465 aa21.65■■□□□ 1.06
SPCS1-204ENST00000474945 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
SPCS1-204ENST00000474945 SUPT6HQ7KZ85 1726 aaKnown RBP21.65■■□□□ 1.06
SPCS1-204ENST00000474945 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.06
SPCS1-204ENST00000474945 MLH3Q9UHC1 1453 aa21.64■■□□□ 1.06
SPCS1-204ENST00000474945 MLECQ14165 292 aa21.63■■□□□ 1.05
SPCS1-204ENST00000474945 NCOA2Q15596 1464 aa21.62■■□□□ 1.05
SPCS1-204ENST00000474945 FER1L4A9Z1Z3 1794 aa21.61■■□□□ 1.05
SPCS1-204ENST00000474945 REREQ9P2R6 1566 aa21.6■■□□□ 1.05
SPCS1-204ENST00000474945 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
SPCS1-204ENST00000474945 KIDINS220Q9ULH0 1771 aa21.59■■□□□ 1.05
SPCS1-204ENST00000474945 LRRC9Q6ZRR7 1453 aa21.58■■□□□ 1.04
SPCS1-204ENST00000474945 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.04
SPCS1-204ENST00000474945 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
SPCS1-204ENST00000474945 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
SPCS1-204ENST00000474945 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
SPCS1-204ENST00000474945 INO80Q9ULG1 1556 aaPredicted RBP21.55■■□□□ 1.04
SPCS1-204ENST00000474945 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
SPCS1-204ENST00000474945 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
SPCS1-204ENST00000474945 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.04
SPCS1-204ENST00000474945 AGLP35573 1532 aa21.51■■□□□ 1.03
SPCS1-204ENST00000474945 MBD5Q9P267 1494 aa21.48■■□□□ 1.03
SPCS1-204ENST00000474945 CCDC141Q6ZP82 1450 aa21.47■■□□□ 1.03
SPCS1-204ENST00000474945 KANK4Q5T7N3 995 aaPredicted RBP21.46■■□□□ 1.03
SPCS1-204ENST00000474945 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.03
SPCS1-204ENST00000474945 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
SPCS1-204ENST00000474945 APLP2Q06481 763 aa21.45■■□□□ 1.02
SPCS1-204ENST00000474945 A2MP01023 1474 aa21.44■■□□□ 1.02
SPCS1-204ENST00000474945 ADGBQ8N7X0 1667 aa21.43■■□□□ 1.02
SPCS1-204ENST00000474945 ESF1Q9H501 851 aaKnown RBP21.41■■□□□ 1.02
SPCS1-204ENST00000474945 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
SPCS1-204ENST00000474945 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
SPCS1-204ENST00000474945 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
SPCS1-204ENST00000474945 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
SPCS1-204ENST00000474945 CEBPAP49715 358 aaPredicted RBP21.37■■□□□ 1.01
SPCS1-204ENST00000474945 C3P01024 1663 aa21.36■■□□□ 1.01
SPCS1-204ENST00000474945 PREX1Q8TCU6 1659 aa21.36■■□□□ 1.01
SPCS1-204ENST00000474945 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
SPCS1-204ENST00000474945 RSPH4AQ5TD94 716 aa21.32■■□□□ 1
SPCS1-204ENST00000474945 MROH2AA6NES4 1674 aa21.31■■□□□ 1
SPCS1-204ENST00000474945 HSPA2P54652 639 aa21.31■■□□□ 1
SPCS1-204ENST00000474945 CLTCQ00610 1675 aaKnown RBP21.31■■□□□ 1
SPCS1-204ENST00000474945 UHRF1BP1Q6BDS2 1440 aa21.3■■□□□ 1
SPCS1-204ENST00000474945 MAST1Q9Y2H9 1570 aa21.29■■□□□ 1
SPCS1-204ENST00000474945 DHX29Q7Z478 1369 aaKnown RBP21.29■■□□□ 1
SPCS1-204ENST00000474945 TSPY4P0CV99 314 aa21.29■■□□□ 1
SPCS1-204ENST00000474945 TSPY10P0CW01 314 aa21.29■■□□□ 1
SPCS1-204ENST00000474945 PTPN23Q9H3S7 1636 aa21.29■■□□□ 1
SPCS1-204ENST00000474945 GGT6Q6P531 493 aa21.28■■□□□ 1
SPCS1-204ENST00000474945 FGD6Q6ZV73 1430 aa21.26■□□□□ 0.99
SPCS1-204ENST00000474945 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
SPCS1-204ENST00000474945 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
SPCS1-204ENST00000474945 NPATQ14207 1427 aa21.22■□□□□ 0.99
SPCS1-204ENST00000474945 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
SPCS1-204ENST00000474945 KIF3BO15066 747 aa21.22■□□□□ 0.99
SPCS1-204ENST00000474945 KDM5DQ9BY66 1539 aa21.22■□□□□ 0.99
SPCS1-204ENST00000474945 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
SPCS1-204ENST00000474945 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
SPCS1-204ENST00000474945 DNMT1P26358 1616 aaKnown RBP21.19■□□□□ 0.98
SPCS1-204ENST00000474945 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms