RNA–Protein interactions for RNA: ENST00000474904.5

GPATCH4-206, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-206ENST00000474904 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
GPATCH4-206ENST00000474904 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
GPATCH4-206ENST00000474904 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
GPATCH4-206ENST00000474904 ADGRL1O94910 1474 aa17.16■□□□□ 0.34
GPATCH4-206ENST00000474904 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
GPATCH4-206ENST00000474904 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
GPATCH4-206ENST00000474904 SCAPERQ9BY12 1400 aa17.14■□□□□ 0.33
GPATCH4-206ENST00000474904 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
GPATCH4-206ENST00000474904 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
GPATCH4-206ENST00000474904 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
GPATCH4-206ENST00000474904 LRRC9Q6ZRR7 1453 aa17.11■□□□□ 0.33
GPATCH4-206ENST00000474904 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
GPATCH4-206ENST00000474904 SUPT6HQ7KZ85 1726 aaKnown RBP17.08■□□□□ 0.32
GPATCH4-206ENST00000474904 KDM5CP41229 1560 aa17.08■□□□□ 0.32
GPATCH4-206ENST00000474904 ABCC1P33527 1531 aa17.08■□□□□ 0.32
GPATCH4-206ENST00000474904 ZNF518AQ6AHZ1 1483 aa17.08■□□□□ 0.32
GPATCH4-206ENST00000474904 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
GPATCH4-206ENST00000474904 KDM4FA0A1W2PPD8 638 aa17.07■□□□□ 0.32
GPATCH4-206ENST00000474904 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
GPATCH4-206ENST00000474904 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
GPATCH4-206ENST00000474904 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
GPATCH4-206ENST00000474904 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
GPATCH4-206ENST00000474904 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
GPATCH4-206ENST00000474904 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
GPATCH4-206ENST00000474904 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
GPATCH4-206ENST00000474904 MLH3Q9UHC1 1453 aa17.04■□□□□ 0.32
GPATCH4-206ENST00000474904 ZFYVE16Q7Z3T8 1539 aa17.03■□□□□ 0.32
GPATCH4-206ENST00000474904 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
GPATCH4-206ENST00000474904 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
GPATCH4-206ENST00000474904 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
GPATCH4-206ENST00000474904 YEATS2Q9ULM3 1422 aa17.01■□□□□ 0.31
GPATCH4-206ENST00000474904 APLP2Q06481 763 aa16.99■□□□□ 0.31
GPATCH4-206ENST00000474904 ATP10AO60312 1499 aa16.99■□□□□ 0.31
GPATCH4-206ENST00000474904 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
GPATCH4-206ENST00000474904 SYCP2Q9BX26 1530 aa16.98■□□□□ 0.31
GPATCH4-206ENST00000474904 ZNF777Q9ULD5 760 aaPredicted RBP16.98■□□□□ 0.31
GPATCH4-206ENST00000474904 MBD5Q9P267 1494 aa16.98■□□□□ 0.31
GPATCH4-206ENST00000474904 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
GPATCH4-206ENST00000474904 REREQ9P2R6 1566 aa16.97■□□□□ 0.31
GPATCH4-206ENST00000474904 KIDINS220Q9ULH0 1771 aa16.96■□□□□ 0.31
GPATCH4-206ENST00000474904 MIA2Q96PC5 1412 aa16.96■□□□□ 0.3
GPATCH4-206ENST00000474904 ADAMTSL3P82987 1691 aa16.95■□□□□ 0.3
GPATCH4-206ENST00000474904 HNRNPMP52272 730 aaKnown RBP eCLIP16.95■□□□□ 0.3
GPATCH4-206ENST00000474904 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
GPATCH4-206ENST00000474904 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
GPATCH4-206ENST00000474904 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
GPATCH4-206ENST00000474904 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
GPATCH4-206ENST00000474904 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
GPATCH4-206ENST00000474904 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
GPATCH4-206ENST00000474904 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
GPATCH4-206ENST00000474904 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
GPATCH4-206ENST00000474904 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
GPATCH4-206ENST00000474904 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
GPATCH4-206ENST00000474904 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
GPATCH4-206ENST00000474904 SPAG9O60271 1321 aaKnown RBP16.91■□□□□ 0.3
GPATCH4-206ENST00000474904 ARHGEF5Q12774 1597 aa16.9■□□□□ 0.3
GPATCH4-206ENST00000474904 AGLP35573 1532 aa16.9■□□□□ 0.3
GPATCH4-206ENST00000474904 ATP7AQ04656 1500 aa16.89■□□□□ 0.29
GPATCH4-206ENST00000474904 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
GPATCH4-206ENST00000474904 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
GPATCH4-206ENST00000474904 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
GPATCH4-206ENST00000474904 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
GPATCH4-206ENST00000474904 MADDQ8WXG6 1647 aa16.84■□□□□ 0.29
GPATCH4-206ENST00000474904 PTPRMP28827 1452 aa16.83■□□□□ 0.28
GPATCH4-206ENST00000474904 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
GPATCH4-206ENST00000474904 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
GPATCH4-206ENST00000474904 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
GPATCH4-206ENST00000474904 MAST1Q9Y2H9 1570 aa16.82■□□□□ 0.28
GPATCH4-206ENST00000474904 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
GPATCH4-206ENST00000474904 A2MP01023 1474 aa16.8■□□□□ 0.28
GPATCH4-206ENST00000474904 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
GPATCH4-206ENST00000474904 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
GPATCH4-206ENST00000474904 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
GPATCH4-206ENST00000474904 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
GPATCH4-206ENST00000474904 RIMS1Q86UR5 1692 aaKnown RBP16.77■□□□□ 0.28
GPATCH4-206ENST00000474904 SHANK2Q9UPX8 1470 aa16.76■□□□□ 0.27
GPATCH4-206ENST00000474904 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
GPATCH4-206ENST00000474904 MLECQ14165 292 aa16.75■□□□□ 0.27
GPATCH4-206ENST00000474904 ABCC5O15440 1437 aa16.75■□□□□ 0.27
GPATCH4-206ENST00000474904 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
GPATCH4-206ENST00000474904 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
GPATCH4-206ENST00000474904 CROCC2H7BZ55 1655 aa16.73■□□□□ 0.27
GPATCH4-206ENST00000474904 DAPK1P53355 1430 aa16.72■□□□□ 0.27
GPATCH4-206ENST00000474904 CNTLNQ9NXG0 1405 aa16.72■□□□□ 0.27
GPATCH4-206ENST00000474904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
GPATCH4-206ENST00000474904 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
GPATCH4-206ENST00000474904 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
GPATCH4-206ENST00000474904 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
GPATCH4-206ENST00000474904 DUOX2Q9NRD8 1548 aa16.67■□□□□ 0.26
GPATCH4-206ENST00000474904 ADGRL2O95490 1459 aa16.66■□□□□ 0.26
GPATCH4-206ENST00000474904 C3P01024 1663 aa16.65■□□□□ 0.26
GPATCH4-206ENST00000474904 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
GPATCH4-206ENST00000474904 KIF3BO15066 747 aa16.65■□□□□ 0.26
GPATCH4-206ENST00000474904 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
GPATCH4-206ENST00000474904 RNF17Q9BXT8 1623 aaKnown RBP16.64■□□□□ 0.25
GPATCH4-206ENST00000474904 GGT6Q6P531 493 aa16.64■□□□□ 0.25
GPATCH4-206ENST00000474904 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
GPATCH4-206ENST00000474904 KIF15Q9NS87 1388 aa16.64■□□□□ 0.25
GPATCH4-206ENST00000474904 ANKRD30AQ9BXX3 1397 aa16.63■□□□□ 0.25
GPATCH4-206ENST00000474904 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms