RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	TAOK2	Q9UL54	1235 aa		3.29	□□□□□ -1.88
HDAC9-222	ENST00000474742	PHF8	Q9UPP1	1060 aa		3.29	□□□□□ -1.88
HDAC9-222	ENST00000474742	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	3.28	□□□□□ -1.88
HDAC9-222	ENST00000474742	VGF	O15240	615 aa	Predicted RBP	3.28	□□□□□ -1.88
HDAC9-222	ENST00000474742	NLRP6	P59044	892 aa		3.28	□□□□□ -1.88
HDAC9-222	ENST00000474742	ZFP91	Q96JP5	570 aa	Predicted RBP	3.28	□□□□□ -1.88
HDAC9-222	ENST00000474742	STAC3	Q96MF2	364 aa		3.28	□□□□□ -1.88
HDAC9-222	ENST00000474742	ZNF316	A6NFI3	1004 aa	Predicted RBP	3.27	□□□□□ -1.89
HDAC9-222	ENST00000474742	GPR153	Q6NV75	609 aa		3.27	□□□□□ -1.89
HDAC9-222	ENST00000474742	TMEM92	Q6UXU6	159 aa		3.27	□□□□□ -1.89
HDAC9-222	ENST00000474742	KHSRP	Q92945	711 aa	Known RBP eCLIP	3.27	□□□□□ -1.89
HDAC9-222	ENST00000474742	LSM11	P83369	360 aa	Known RBP eCLIP	3.26	□□□□□ -1.89
HDAC9-222	ENST00000474742	STK24	Q9Y6E0	443 aa		3.26	□□□□□ -1.89
HDAC9-222	ENST00000474742	NUDT7	P0C024	238 aa		3.25	□□□□□ -1.89
HDAC9-222	ENST00000474742	TMC2	Q8TDI7	906 aa		3.25	□□□□□ -1.89
HDAC9-222	ENST00000474742	PLA2G2E	Q9NZK7	142 aa		3.25	□□□□□ -1.89
HDAC9-222	ENST00000474742	HCST	Q9UBK5	93 aa		3.25	□□□□□ -1.89
HDAC9-222	ENST00000474742	PBX2	P40425	430 aa		3.24	□□□□□ -1.89
HDAC9-222	ENST00000474742	MS4A4A	Q96JQ5	239 aa		3.24	□□□□□ -1.89
HDAC9-222	ENST00000474742	BCL11B	Q9C0K0	894 aa	Predicted RBP	3.24	□□□□□ -1.89
HDAC9-222	ENST00000474742	AXIN2	Q9Y2T1	843 aa		3.24	□□□□□ -1.89
HDAC9-222	ENST00000474742	STK25	O00506	426 aa		3.23	□□□□□ -1.89
HDAC9-222	ENST00000474742	KCNH8	Q96L42	1107 aa		3.23	□□□□□ -1.89
HDAC9-222	ENST00000474742	C2orf72	A6NCS6	295 aa		3.22	□□□□□ -1.89
HDAC9-222	ENST00000474742	RNF25	Q96BH1	459 aa	Predicted RBP	3.22	□□□□□ -1.89
HDAC9-222	ENST00000474742	LHX6	Q9UPM6	363 aa		3.22	□□□□□ -1.89
HDAC9-222	ENST00000474742	PCDHGA4	Q9Y5G9	962 aa		3.22	□□□□□ -1.89
HDAC9-222	ENST00000474742	PSD	A5PKW4	1024 aa	Predicted RBP	3.21	□□□□□ -1.9
HDAC9-222	ENST00000474742	ARHGAP33	O14559	1287 aa		3.2	□□□□□ -1.9
HDAC9-222	ENST00000474742	ECM2	O94769	699 aa	Predicted RBP	3.2	□□□□□ -1.9
HDAC9-222	ENST00000474742	ADGRD1	Q6QNK2	874 aa		3.2	□□□□□ -1.9
HDAC9-222	ENST00000474742	KCTD12	Q96CX2	325 aa	Known RBP	3.2	□□□□□ -1.9
HDAC9-222	ENST00000474742	GOLGA8CP	A6NN73	597 aa		3.19	□□□□□ -1.9
HDAC9-222	ENST00000474742	TBC1D12	O60347	775 aa		3.19	□□□□□ -1.9
HDAC9-222	ENST00000474742	PPP4R3B	Q5MIZ7	849 aa		3.19	□□□□□ -1.9
HDAC9-222	ENST00000474742	FBXO22	Q8NEZ5	403 aa		3.19	□□□□□ -1.9
HDAC9-222	ENST00000474742	MFRP	Q9BY79	579 aa		3.19	□□□□□ -1.9
HDAC9-222	ENST00000474742	PTPN5	P54829	565 aa		3.18	□□□□□ -1.9
HDAC9-222	ENST00000474742	KIF3C	O14782	793 aa		3.17	□□□□□ -1.9
HDAC9-222	ENST00000474742	SLC34A2	O95436	690 aa		3.17	□□□□□ -1.9
HDAC9-222	ENST00000474742	PSEN2	P49810	448 aa		3.17	□□□□□ -1.9
HDAC9-222	ENST00000474742	KCNK17	Q96T54	332 aa		3.17	□□□□□ -1.9
HDAC9-222	ENST00000474742	TK2	O00142	265 aa		3.16	□□□□□ -1.9
HDAC9-222	ENST00000474742	DMRTA1	Q5VZB9	504 aa		3.16	□□□□□ -1.9
HDAC9-222	ENST00000474742	POTEE	Q6S8J3	1075 aa		3.16	□□□□□ -1.9
HDAC9-222	ENST00000474742	PLPP6	Q8IY26	295 aa		3.16	□□□□□ -1.9
HDAC9-222	ENST00000474742	IRX2	Q9BZI1	471 aa	Predicted RBP	3.15	□□□□□ -1.91
HDAC9-222	ENST00000474742	MRPL50	Q8N5N7	158 aa	Known RBP	3.13	□□□□□ -1.91
HDAC9-222	ENST00000474742	ZNF454	Q8N9F8	522 aa		3.13	□□□□□ -1.91
HDAC9-222	ENST00000474742	PTCD2	Q8WV60	388 aa	Known RBP	3.13	□□□□□ -1.91
HDAC9-222	ENST00000474742	UPF1	Q92900	1129 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
HDAC9-222	ENST00000474742	RGL2	O15211	777 aa		3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	HR	O43593	1189 aa		3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	PPP1R37	O75864	691 aa		3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	PTPRE	P23469	700 aa		3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	FOXK1	P85037	733 aa		3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	WNT2B	Q93097	391 aa		3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	GPHN	Q9NQX3	736 aa	Predicted RBP	3.12	□□□□□ -1.91
HDAC9-222	ENST00000474742	RGS20	O76081	388 aa		3.11	□□□□□ -1.91
HDAC9-222	ENST00000474742	DSG2	Q14126	1118 aa		3.11	□□□□□ -1.91
HDAC9-222	ENST00000474742	NBPF3	Q9H094	633 aa		3.11	□□□□□ -1.91
HDAC9-222	ENST00000474742	VPS9D1	Q9Y2B5	631 aa		3.11	□□□□□ -1.91
HDAC9-222	ENST00000474742	PKD2	Q13563	968 aa		3.1	□□□□□ -1.91
HDAC9-222	ENST00000474742	THSD4	Q6ZMP0	1018 aa		3.1	□□□□□ -1.91
HDAC9-222	ENST00000474742		Q6ZNB5	142 aa		3.1	□□□□□ -1.91
HDAC9-222	ENST00000474742		A0A0G2JS52	829 aa		3.09	□□□□□ -1.91
HDAC9-222	ENST00000474742	CHGA	P10645	457 aa	Known RBP	3.09	□□□□□ -1.91
HDAC9-222	ENST00000474742	ANKK1	Q8NFD2	765 aa		3.09	□□□□□ -1.91
HDAC9-222	ENST00000474742	RYDEN	Q9NUL5	291 aa	Known RBP	3.09	□□□□□ -1.91
HDAC9-222	ENST00000474742	KDM4F	A0A1W2PPD8	638 aa		3.08	□□□□□ -1.92
HDAC9-222	ENST00000474742	BCL2L12	Q9HB09	334 aa		3.08	□□□□□ -1.92
HDAC9-222	ENST00000474742	MAP3K9	P80192	1104 aa		3.07	□□□□□ -1.92
HDAC9-222	ENST00000474742	PPP1R15B	Q5SWA1	713 aa		3.07	□□□□□ -1.92
HDAC9-222	ENST00000474742	OXER1	Q8TDS5	423 aa		3.07	□□□□□ -1.92
HDAC9-222	ENST00000474742	ZDHHC16	Q969W1	377 aa		3.07	□□□□□ -1.92
HDAC9-222	ENST00000474742	SLC4A5	Q9BY07	1137 aa		3.07	□□□□□ -1.92
HDAC9-222	ENST00000474742	EVI5	O60447	810 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	PDE4A	P27815	886 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	FOSB	P53539	338 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	IFFO2	Q5TF58	517 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	HS6ST3	Q8IZP7	471 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	JPH4	Q96JJ6	628 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	ZBED2	Q9BTP6	218 aa		3.06	□□□□□ -1.92
HDAC9-222	ENST00000474742	KCNC4	Q03721	635 aa		3.05	□□□□□ -1.92
HDAC9-222	ENST00000474742	BHMG1	C9JSJ3	638 aa	Predicted RBP	3.04	□□□□□ -1.92
HDAC9-222	ENST00000474742	BCAM	P50895	628 aa		3.04	□□□□□ -1.92
HDAC9-222	ENST00000474742	LARP6	Q9BRS8	491 aa	Known RBP	3.04	□□□□□ -1.92
HDAC9-222	ENST00000474742	ADAM33	Q9BZ11	813 aa		3.04	□□□□□ -1.92
HDAC9-222	ENST00000474742	RTN4	Q9NQC3	1192 aa	Known RBP	3.04	□□□□□ -1.92
HDAC9-222	ENST00000474742	PPP1R3G	B7ZBB8	358 aa		3.03	□□□□□ -1.92
HDAC9-222	ENST00000474742	LAPTM4A	Q15012	233 aa		3.03	□□□□□ -1.92
HDAC9-222	ENST00000474742	PROX2	Q3B8N5	592 aa		3.03	□□□□□ -1.92
HDAC9-222	ENST00000474742	NYAP1	Q6ZVC0	841 aa		3.03	□□□□□ -1.92
HDAC9-222	ENST00000474742	DDX27	Q96GQ7	796 aa	Known RBP	3.03	□□□□□ -1.92
HDAC9-222	ENST00000474742	RABGEF1	Q9UJ41	708 aa		3.03	□□□□□ -1.92
HDAC9-222	ENST00000474742	GFRA3	O60609	400 aa		3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	DCAF8L2	P0C7V8	631 aa		3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	TYW1B	Q6NUM6	668 aa		3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	LAPTM4B	Q86VI4	370 aa		3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	FBXW7	Q969H0	707 aa		3.02	□□□□□ -1.93

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