RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 EFCAB3Q8N7B9 438 aa12.18□□□□□ -0.46
RABGAP1-208ENST00000474707 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
RABGAP1-208ENST00000474707 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
RABGAP1-208ENST00000474707 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
RABGAP1-208ENST00000474707 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
RABGAP1-208ENST00000474707 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
RABGAP1-208ENST00000474707 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-208ENST00000474707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
RABGAP1-208ENST00000474707 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
RABGAP1-208ENST00000474707 SOX12O15370 315 aa12.05□□□□□ -0.48
RABGAP1-208ENST00000474707 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
RABGAP1-208ENST00000474707 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
RABGAP1-208ENST00000474707 MS4A4AQ96JQ5 239 aa12.04□□□□□ -0.48
RABGAP1-208ENST00000474707 PBX2P40425 430 aa12.02□□□□□ -0.49
RABGAP1-208ENST00000474707 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
RABGAP1-208ENST00000474707 PHF8Q9UPP1 1060 aa11.99□□□□□ -0.49
RABGAP1-208ENST00000474707 NUDT7P0C024 238 aa11.94□□□□□ -0.5
RABGAP1-208ENST00000474707 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
RABGAP1-208ENST00000474707 ADGRD1Q6QNK2 874 aa11.93□□□□□ -0.5
RABGAP1-208ENST00000474707 LHX6Q9UPM6 363 aa11.91□□□□□ -0.5
RABGAP1-208ENST00000474707 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
RABGAP1-208ENST00000474707 NLRP6P59044 892 aa11.89□□□□□ -0.51
RABGAP1-208ENST00000474707 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
RABGAP1-208ENST00000474707 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
RABGAP1-208ENST00000474707 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
RABGAP1-208ENST00000474707 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
RABGAP1-208ENST00000474707 RGS20O76081 388 aa11.84□□□□□ -0.51
RABGAP1-208ENST00000474707 MFRPQ9BY79 579 aa11.84□□□□□ -0.51
RABGAP1-208ENST00000474707 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
RABGAP1-208ENST00000474707 HRO43593 1189 aa11.79□□□□□ -0.52
RABGAP1-208ENST00000474707 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
RABGAP1-208ENST00000474707 STK25O00506 426 aa11.78□□□□□ -0.52
RABGAP1-208ENST00000474707 TK2O00142 265 aa11.77□□□□□ -0.53
RABGAP1-208ENST00000474707 KIF3CO14782 793 aa11.77□□□□□ -0.53
RABGAP1-208ENST00000474707 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
RABGAP1-208ENST00000474707 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
RABGAP1-208ENST00000474707 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
RABGAP1-208ENST00000474707 PTPN5P54829 565 aa11.74□□□□□ -0.53
RABGAP1-208ENST00000474707 C2orf72A6NCS6 295 aa11.73□□□□□ -0.53
RABGAP1-208ENST00000474707 PSEN2P49810 448 aa11.73□□□□□ -0.53
RABGAP1-208ENST00000474707 PKD2Q13563 968 aa11.71□□□□□ -0.53
RABGAP1-208ENST00000474707 RGL2O15211 777 aa11.7□□□□□ -0.54
RABGAP1-208ENST00000474707 SLC34A2O95436 690 aa11.69□□□□□ -0.54
RABGAP1-208ENST00000474707 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
RABGAP1-208ENST00000474707 A0A0G2JS52 829 aa11.68□□□□□ -0.54
RABGAP1-208ENST00000474707 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
RABGAP1-208ENST00000474707 Q6ZNB5 142 aa11.66□□□□□ -0.54
RABGAP1-208ENST00000474707 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
RABGAP1-208ENST00000474707 PPP1R37O75864 691 aa11.61□□□□□ -0.55
RABGAP1-208ENST00000474707 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
RABGAP1-208ENST00000474707 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
RABGAP1-208ENST00000474707 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
RABGAP1-208ENST00000474707 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
RABGAP1-208ENST00000474707 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
RABGAP1-208ENST00000474707 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
RABGAP1-208ENST00000474707 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
RABGAP1-208ENST00000474707 HS6ST3Q8IZP7 471 aa11.48□□□□□ -0.57
RABGAP1-208ENST00000474707 FOXK1P85037 733 aa11.47□□□□□ -0.57
RABGAP1-208ENST00000474707 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.57
RABGAP1-208ENST00000474707 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
RABGAP1-208ENST00000474707 WNT2BQ93097 391 aa11.44□□□□□ -0.58
RABGAP1-208ENST00000474707 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
RABGAP1-208ENST00000474707 DSG2Q14126 1118 aa11.4□□□□□ -0.58
RABGAP1-208ENST00000474707 BHMG1C9JSJ3 638 aaPredicted RBP11.39□□□□□ -0.59
RABGAP1-208ENST00000474707 TRAF7Q6Q0C0 670 aa11.38□□□□□ -0.59
RABGAP1-208ENST00000474707 LCE2BO14633 110 aa11.37□□□□□ -0.59
RABGAP1-208ENST00000474707 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
RABGAP1-208ENST00000474707 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
RABGAP1-208ENST00000474707 TBC1D12O60347 775 aa11.35□□□□□ -0.59
RABGAP1-208ENST00000474707 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
RABGAP1-208ENST00000474707 LAPTM4AQ15012 233 aa11.34□□□□□ -0.59
RABGAP1-208ENST00000474707 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
RABGAP1-208ENST00000474707 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
RABGAP1-208ENST00000474707 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
RABGAP1-208ENST00000474707 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
RABGAP1-208ENST00000474707 GFRA3O60609 400 aa11.3□□□□□ -0.6
RABGAP1-208ENST00000474707 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
RABGAP1-208ENST00000474707 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
RABGAP1-208ENST00000474707 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
RABGAP1-208ENST00000474707 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
RABGAP1-208ENST00000474707 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
RABGAP1-208ENST00000474707 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
RABGAP1-208ENST00000474707 PTPREP23469 700 aa11.24□□□□□ -0.61
RABGAP1-208ENST00000474707 PPP1R15BQ5SWA1 713 aa11.23□□□□□ -0.61
RABGAP1-208ENST00000474707 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
RABGAP1-208ENST00000474707 NCKAP5LQ9HCH0 1330 aa11.21□□□□□ -0.61
RABGAP1-208ENST00000474707 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
RABGAP1-208ENST00000474707 KCNC4Q03721 635 aa11.2□□□□□ -0.62
RABGAP1-208ENST00000474707 FOSBP53539 338 aa11.18□□□□□ -0.62
RABGAP1-208ENST00000474707 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
RABGAP1-208ENST00000474707 PDE4AP27815 886 aa11.16□□□□□ -0.62
RABGAP1-208ENST00000474707 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
RABGAP1-208ENST00000474707 BCAMP50895 628 aa11.15□□□□□ -0.62
RABGAP1-208ENST00000474707 ZNF775Q96BV0 537 aaPredicted RBP11.15□□□□□ -0.62
RABGAP1-208ENST00000474707 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
RABGAP1-208ENST00000474707 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
RABGAP1-208ENST00000474707 EVI5O60447 810 aa11.12□□□□□ -0.63
RABGAP1-208ENST00000474707 NRG2O14511 850 aaPredicted RBP11.11□□□□□ -0.63
RABGAP1-208ENST00000474707 NYAP1Q6ZVC0 841 aa11.09□□□□□ -0.63
RABGAP1-208ENST00000474707 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms