RNA–Protein interactions for RNA: ENST00000474354.1

NRXN1-216, Transcript of neurexin 1, humanhuman

TSL 4

Gene NRXN1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-216ENST00000474354 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
NRXN1-216ENST00000474354 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
NRXN1-216ENST00000474354 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
NRXN1-216ENST00000474354 DOK7Q18PE1 504 aa12.32□□□□□ -0.44
NRXN1-216ENST00000474354 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
NRXN1-216ENST00000474354 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
NRXN1-216ENST00000474354 KIF3CO14782 793 aa12.27□□□□□ -0.45
NRXN1-216ENST00000474354 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
NRXN1-216ENST00000474354 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
NRXN1-216ENST00000474354 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
NRXN1-216ENST00000474354 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
NRXN1-216ENST00000474354 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
NRXN1-216ENST00000474354 GTPBP6O43824 516 aaPredicted RBP12.22□□□□□ -0.45
NRXN1-216ENST00000474354 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
NRXN1-216ENST00000474354 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
NRXN1-216ENST00000474354 EMP3P54852 163 aa12.21□□□□□ -0.45
NRXN1-216ENST00000474354 NISCHQ9Y2I1 1504 aa12.18□□□□□ -0.46
NRXN1-216ENST00000474354 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
NRXN1-216ENST00000474354 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
NRXN1-216ENST00000474354 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
NRXN1-216ENST00000474354 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
NRXN1-216ENST00000474354 FOXK1P85037 733 aa12.12□□□□□ -0.47
NRXN1-216ENST00000474354 SLC34A2O95436 690 aa12.11□□□□□ -0.47
NRXN1-216ENST00000474354 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
NRXN1-216ENST00000474354 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
NRXN1-216ENST00000474354 ERBB3P21860 1342 aa12.08□□□□□ -0.48
NRXN1-216ENST00000474354 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
NRXN1-216ENST00000474354 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
NRXN1-216ENST00000474354 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
NRXN1-216ENST00000474354 DSG2Q14126 1118 aa12.06□□□□□ -0.48
NRXN1-216ENST00000474354 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
NRXN1-216ENST00000474354 PDE4AP27815 886 aa12.05□□□□□ -0.48
NRXN1-216ENST00000474354 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
NRXN1-216ENST00000474354 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
NRXN1-216ENST00000474354 KHSRPQ92945 711 aaKnown RBP eCLIP12.03□□□□□ -0.48
NRXN1-216ENST00000474354 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
NRXN1-216ENST00000474354 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
NRXN1-216ENST00000474354 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
NRXN1-216ENST00000474354 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
NRXN1-216ENST00000474354 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
NRXN1-216ENST00000474354 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
NRXN1-216ENST00000474354 NUDT7P0C024 238 aa11.98□□□□□ -0.49
NRXN1-216ENST00000474354 TBC1D12O60347 775 aa11.96□□□□□ -0.49
NRXN1-216ENST00000474354 LARP6Q9BRS8 491 aaKnown RBP11.96□□□□□ -0.49
NRXN1-216ENST00000474354 CADPS2Q86UW7 1296 aa11.95□□□□□ -0.5
NRXN1-216ENST00000474354 ZNF687Q8N1G0 1237 aa11.95□□□□□ -0.5
NRXN1-216ENST00000474354 DDX27Q96GQ7 796 aaKnown RBP11.95□□□□□ -0.5
NRXN1-216ENST00000474354 MFSD10Q14728 455 aa11.94□□□□□ -0.5
NRXN1-216ENST00000474354 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
NRXN1-216ENST00000474354 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
NRXN1-216ENST00000474354 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
NRXN1-216ENST00000474354 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
NRXN1-216ENST00000474354 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
NRXN1-216ENST00000474354 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
NRXN1-216ENST00000474354 KDM4FA0A1W2PPD8 638 aa11.9□□□□□ -0.5
NRXN1-216ENST00000474354 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
NRXN1-216ENST00000474354 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
NRXN1-216ENST00000474354 PBX2P40425 430 aa11.82□□□□□ -0.52
NRXN1-216ENST00000474354 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
NRXN1-216ENST00000474354 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
NRXN1-216ENST00000474354 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
NRXN1-216ENST00000474354 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
NRXN1-216ENST00000474354 EVI5O60447 810 aa11.76□□□□□ -0.53
NRXN1-216ENST00000474354 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
NRXN1-216ENST00000474354 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
NRXN1-216ENST00000474354 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
NRXN1-216ENST00000474354 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
NRXN1-216ENST00000474354 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
NRXN1-216ENST00000474354 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
NRXN1-216ENST00000474354 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
NRXN1-216ENST00000474354 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
NRXN1-216ENST00000474354 PTGER2P43116 358 aa11.7□□□□□ -0.54
NRXN1-216ENST00000474354 FOSBP53539 338 aa11.7□□□□□ -0.54
NRXN1-216ENST00000474354 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
NRXN1-216ENST00000474354 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
NRXN1-216ENST00000474354 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
NRXN1-216ENST00000474354 DPYSL4O14531 572 aa11.66□□□□□ -0.54
NRXN1-216ENST00000474354 E2F4Q16254 413 aa11.66□□□□□ -0.54
NRXN1-216ENST00000474354 PSEN2P49810 448 aa11.65□□□□□ -0.54
NRXN1-216ENST00000474354 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
NRXN1-216ENST00000474354 ZDHHC16Q969W1 377 aa11.64□□□□□ -0.55
NRXN1-216ENST00000474354 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
NRXN1-216ENST00000474354 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
NRXN1-216ENST00000474354 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
NRXN1-216ENST00000474354 TK2O00142 265 aa11.62□□□□□ -0.55
NRXN1-216ENST00000474354 DMRTA1Q5VZB9 504 aa11.62□□□□□ -0.55
NRXN1-216ENST00000474354 ADGRD1Q6QNK2 874 aa11.61□□□□□ -0.55
NRXN1-216ENST00000474354 PHF14O94880 888 aa11.6□□□□□ -0.55
NRXN1-216ENST00000474354 PTPREP23469 700 aa11.6□□□□□ -0.55
NRXN1-216ENST00000474354 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
NRXN1-216ENST00000474354 PCDHGA10Q9Y5H3 936 aa11.6□□□□□ -0.55
NRXN1-216ENST00000474354 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
NRXN1-216ENST00000474354 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
NRXN1-216ENST00000474354 PDIA6Q15084 440 aa11.58□□□□□ -0.56
NRXN1-216ENST00000474354 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
NRXN1-216ENST00000474354 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
NRXN1-216ENST00000474354 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
NRXN1-216ENST00000474354 EPAS1Q99814 870 aa11.56□□□□□ -0.56
NRXN1-216ENST00000474354 SLC4A5Q9BY07 1137 aa11.54□□□□□ -0.56
NRXN1-216ENST00000474354 HRO43593 1189 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms