RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 FANCAO15360 1455 aa16.43■□□□□ 0.22
VANGL1-205ENST00000474344 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
VANGL1-205ENST00000474344 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
VANGL1-205ENST00000474344 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
VANGL1-205ENST00000474344 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
VANGL1-205ENST00000474344 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
VANGL1-205ENST00000474344 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
VANGL1-205ENST00000474344 ARHGAP5Q13017 1502 aa16.39■□□□□ 0.21
VANGL1-205ENST00000474344 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
VANGL1-205ENST00000474344 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
VANGL1-205ENST00000474344 APLP2Q06481 763 aa16.36■□□□□ 0.21
VANGL1-205ENST00000474344 ABCC1P33527 1531 aa16.35■□□□□ 0.21
VANGL1-205ENST00000474344 ADGRL1O94910 1474 aa16.34■□□□□ 0.21
VANGL1-205ENST00000474344 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
VANGL1-205ENST00000474344 SCAPERQ9BY12 1400 aa16.33■□□□□ 0.2
VANGL1-205ENST00000474344 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.2
VANGL1-205ENST00000474344 RAPGEF3O95398 923 aa16.32■□□□□ 0.2
VANGL1-205ENST00000474344 CFDP1Q9UEE9 299 aaPredicted RBP16.31■□□□□ 0.2
VANGL1-205ENST00000474344 ZMYM4Q5VZL5 1548 aa16.3■□□□□ 0.2
VANGL1-205ENST00000474344 POGZQ7Z3K3 1410 aa16.3■□□□□ 0.2
VANGL1-205ENST00000474344 KDM5CP41229 1560 aa16.3■□□□□ 0.2
VANGL1-205ENST00000474344 MYOM3Q5VTT5 1437 aa16.29■□□□□ 0.2
VANGL1-205ENST00000474344 KIAA1107Q9UPP5 1409 aa16.29■□□□□ 0.2
VANGL1-205ENST00000474344 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
VANGL1-205ENST00000474344 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
VANGL1-205ENST00000474344 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.2
VANGL1-205ENST00000474344 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
VANGL1-205ENST00000474344 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.19
VANGL1-205ENST00000474344 MBD5Q9P267 1494 aa16.27■□□□□ 0.19
VANGL1-205ENST00000474344 ZNF518AQ6AHZ1 1483 aa16.26■□□□□ 0.19
VANGL1-205ENST00000474344 KIDINS220Q9ULH0 1771 aa16.25■□□□□ 0.19
VANGL1-205ENST00000474344 CAMSAP2Q08AD1 1489 aa16.24■□□□□ 0.19
VANGL1-205ENST00000474344 AFAP1Q8N556 730 aa16.24■□□□□ 0.19
VANGL1-205ENST00000474344 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
VANGL1-205ENST00000474344 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
VANGL1-205ENST00000474344 MAGI2Q86UL8 1455 aa16.23■□□□□ 0.19
VANGL1-205ENST00000474344 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
VANGL1-205ENST00000474344 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
VANGL1-205ENST00000474344 FGD6Q6ZV73 1430 aa16.22■□□□□ 0.19
VANGL1-205ENST00000474344 ARHGEF40Q8TER5 1519 aa16.22■□□□□ 0.19
VANGL1-205ENST00000474344 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
VANGL1-205ENST00000474344 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.19
VANGL1-205ENST00000474344 SIGLEC1Q9BZZ2 1709 aa16.21■□□□□ 0.19
VANGL1-205ENST00000474344 TCOF1Q13428 1488 aaKnown RBP16.21■□□□□ 0.19
VANGL1-205ENST00000474344 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
VANGL1-205ENST00000474344 INO80Q9ULG1 1556 aaPredicted RBP16.19■□□□□ 0.18
VANGL1-205ENST00000474344 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
VANGL1-205ENST00000474344 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
VANGL1-205ENST00000474344 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
VANGL1-205ENST00000474344 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
VANGL1-205ENST00000474344 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
VANGL1-205ENST00000474344 CROCC2H7BZ55 1655 aa16.16■□□□□ 0.18
VANGL1-205ENST00000474344 RSPH4AQ5TD94 716 aa16.16■□□□□ 0.18
VANGL1-205ENST00000474344 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
VANGL1-205ENST00000474344 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
VANGL1-205ENST00000474344 ATP7AQ04656 1500 aa16.14■□□□□ 0.18
VANGL1-205ENST00000474344 MAST1Q9Y2H9 1570 aa16.14■□□□□ 0.17
VANGL1-205ENST00000474344 RTEL1-TNFRSF6BF6WH68 1400 aa16.14■□□□□ 0.17
VANGL1-205ENST00000474344 ATP10AO60312 1499 aa16.14■□□□□ 0.17
VANGL1-205ENST00000474344 ADGBQ8N7X0 1667 aa16.13■□□□□ 0.17
VANGL1-205ENST00000474344 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
VANGL1-205ENST00000474344 ABCC5O15440 1437 aa16.11■□□□□ 0.17
VANGL1-205ENST00000474344 BCORL1Q5H9F3 1711 aa16.11■□□□□ 0.17
VANGL1-205ENST00000474344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
VANGL1-205ENST00000474344 C9orf84Q5VXU9 1444 aa16.1■□□□□ 0.17
VANGL1-205ENST00000474344 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
VANGL1-205ENST00000474344 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
VANGL1-205ENST00000474344 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.17
VANGL1-205ENST00000474344 DAPK1P53355 1430 aa16.08■□□□□ 0.16
VANGL1-205ENST00000474344 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
VANGL1-205ENST00000474344 AGLP35573 1532 aa16.08■□□□□ 0.16
VANGL1-205ENST00000474344 KDM4FA0A1W2PPD8 638 aa16.06■□□□□ 0.16
VANGL1-205ENST00000474344 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
VANGL1-205ENST00000474344 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
VANGL1-205ENST00000474344 A2MP01023 1474 aa16.03■□□□□ 0.16
VANGL1-205ENST00000474344 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
VANGL1-205ENST00000474344 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
VANGL1-205ENST00000474344 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
VANGL1-205ENST00000474344 ADGRL2O95490 1459 aa16.02■□□□□ 0.15
VANGL1-205ENST00000474344 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
VANGL1-205ENST00000474344 NCOA1Q15788 1441 aa16■□□□□ 0.15
VANGL1-205ENST00000474344 FER1L4A9Z1Z3 1794 aa16■□□□□ 0.15
VANGL1-205ENST00000474344 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
VANGL1-205ENST00000474344 EIF2AK4Q9P2K8 1649 aaKnown RBP15.97■□□□□ 0.15
VANGL1-205ENST00000474344 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
VANGL1-205ENST00000474344 DUOX2Q9NRD8 1548 aa15.97■□□□□ 0.15
VANGL1-205ENST00000474344 RNF17Q9BXT8 1623 aaKnown RBP15.95■□□□□ 0.14
VANGL1-205ENST00000474344 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
VANGL1-205ENST00000474344 ROCK1Q13464 1354 aa15.95■□□□□ 0.14
VANGL1-205ENST00000474344 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
VANGL1-205ENST00000474344 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
VANGL1-205ENST00000474344 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
VANGL1-205ENST00000474344 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
VANGL1-205ENST00000474344 MROH1Q8NDA8 1641 aa15.93■□□□□ 0.14
VANGL1-205ENST00000474344 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
VANGL1-205ENST00000474344 DEPDC5O75140 1603 aa15.92■□□□□ 0.14
VANGL1-205ENST00000474344 MLECQ14165 292 aa15.91■□□□□ 0.14
VANGL1-205ENST00000474344 MROH2AA6NES4 1674 aa15.91■□□□□ 0.14
VANGL1-205ENST00000474344 ERBINQ96RT1 1412 aa15.91■□□□□ 0.14
VANGL1-205ENST00000474344 PTPRMP28827 1452 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms