RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
PKNOX1-205ENST00000474336 SOX12O15370 315 aa13.88□□□□□ -0.19
PKNOX1-205ENST00000474336 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
PKNOX1-205ENST00000474336 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
PKNOX1-205ENST00000474336 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
PKNOX1-205ENST00000474336 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
PKNOX1-205ENST00000474336 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
PKNOX1-205ENST00000474336 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
PKNOX1-205ENST00000474336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
PKNOX1-205ENST00000474336 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
PKNOX1-205ENST00000474336 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
PKNOX1-205ENST00000474336 RNF25Q96BH1 459 aaPredicted RBP13.79□□□□□ -0.2
PKNOX1-205ENST00000474336 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
PKNOX1-205ENST00000474336 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
PKNOX1-205ENST00000474336 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
PKNOX1-205ENST00000474336 ZNF687Q8N1G0 1237 aa13.76□□□□□ -0.21
PKNOX1-205ENST00000474336 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
PKNOX1-205ENST00000474336 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
PKNOX1-205ENST00000474336 NLRP6P59044 892 aa13.67□□□□□ -0.22
PKNOX1-205ENST00000474336 ARSIQ5FYB1 569 aa13.66□□□□□ -0.22
PKNOX1-205ENST00000474336 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
PKNOX1-205ENST00000474336 PTGER2P43116 358 aa13.62□□□□□ -0.23
PKNOX1-205ENST00000474336 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
PKNOX1-205ENST00000474336 BCL11BQ9C0K0 894 aaPredicted RBP13.61□□□□□ -0.23
PKNOX1-205ENST00000474336 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
PKNOX1-205ENST00000474336 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
PKNOX1-205ENST00000474336 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
PKNOX1-205ENST00000474336 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
PKNOX1-205ENST00000474336 ANKRD13DQ6ZTN6 518 aa13.56□□□□□ -0.24
PKNOX1-205ENST00000474336 BAZ1AQ9NRL2 1556 aaPredicted RBP13.55□□□□□ -0.24
PKNOX1-205ENST00000474336 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
PKNOX1-205ENST00000474336 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
PKNOX1-205ENST00000474336 KIF3CO14782 793 aa13.52□□□□□ -0.25
PKNOX1-205ENST00000474336 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
PKNOX1-205ENST00000474336 LSM11P83369 360 aaKnown RBP eCLIP13.5□□□□□ -0.25
PKNOX1-205ENST00000474336 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
PKNOX1-205ENST00000474336 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
PKNOX1-205ENST00000474336 STK25O00506 426 aa13.48□□□□□ -0.25
PKNOX1-205ENST00000474336 NUDT7P0C024 238 aa13.46□□□□□ -0.25
PKNOX1-205ENST00000474336 WIZO95785 1651 aa13.46□□□□□ -0.26
PKNOX1-205ENST00000474336 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-205ENST00000474336 PBX2P40425 430 aa13.45□□□□□ -0.26
PKNOX1-205ENST00000474336 SLC34A2O95436 690 aa13.43□□□□□ -0.26
PKNOX1-205ENST00000474336 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
PKNOX1-205ENST00000474336 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
PKNOX1-205ENST00000474336 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
PKNOX1-205ENST00000474336 PCDHGA4Q9Y5G9 962 aa13.41□□□□□ -0.26
PKNOX1-205ENST00000474336 TMC2Q8TDI7 906 aa13.39□□□□□ -0.27
PKNOX1-205ENST00000474336 POTEEQ6S8J3 1075 aa13.36□□□□□ -0.27
PKNOX1-205ENST00000474336 AXIN2Q9Y2T1 843 aa13.36□□□□□ -0.27
PKNOX1-205ENST00000474336 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
PKNOX1-205ENST00000474336 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
PKNOX1-205ENST00000474336 PEG3Q9GZU2 1588 aa13.32□□□□□ -0.28
PKNOX1-205ENST00000474336 RGL2O15211 777 aa13.3□□□□□ -0.28
PKNOX1-205ENST00000474336 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
PKNOX1-205ENST00000474336 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
PKNOX1-205ENST00000474336 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
PKNOX1-205ENST00000474336 PPP1R37O75864 691 aa13.27□□□□□ -0.29
PKNOX1-205ENST00000474336 PKD2Q13563 968 aa13.27□□□□□ -0.29
PKNOX1-205ENST00000474336 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
PKNOX1-205ENST00000474336 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
PKNOX1-205ENST00000474336 ADGRD1Q6QNK2 874 aa13.26□□□□□ -0.29
PKNOX1-205ENST00000474336 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-205ENST00000474336 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
PKNOX1-205ENST00000474336 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-205ENST00000474336 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
PKNOX1-205ENST00000474336 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
PKNOX1-205ENST00000474336 TK2O00142 265 aa13.19□□□□□ -0.3
PKNOX1-205ENST00000474336 FOXK1P85037 733 aa13.18□□□□□ -0.3
PKNOX1-205ENST00000474336 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
PKNOX1-205ENST00000474336 HRO43593 1189 aa13.15□□□□□ -0.3
PKNOX1-205ENST00000474336 PSEN2P49810 448 aa13.15□□□□□ -0.3
PKNOX1-205ENST00000474336 DMRTA1Q5VZB9 504 aa13.15□□□□□ -0.3
PKNOX1-205ENST00000474336 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
PKNOX1-205ENST00000474336 TBC1D12O60347 775 aa13.14□□□□□ -0.31
PKNOX1-205ENST00000474336 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-205ENST00000474336 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
PKNOX1-205ENST00000474336 DSG2Q14126 1118 aa13.09□□□□□ -0.31
PKNOX1-205ENST00000474336 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
PKNOX1-205ENST00000474336 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
PKNOX1-205ENST00000474336 KCTD12Q96CX2 325 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-205ENST00000474336 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
PKNOX1-205ENST00000474336 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
PKNOX1-205ENST00000474336 KCNK17Q96T54 332 aa13.02□□□□□ -0.33
PKNOX1-205ENST00000474336 PRDM2Q13029 1718 aa13.02□□□□□ -0.33
PKNOX1-205ENST00000474336 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
PKNOX1-205ENST00000474336 VPS9D1Q9Y2B5 631 aa12.97□□□□□ -0.33
PKNOX1-205ENST00000474336 ZNF454Q8N9F8 522 aa12.93□□□□□ -0.34
PKNOX1-205ENST00000474336 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
PKNOX1-205ENST00000474336 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
PKNOX1-205ENST00000474336 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-205ENST00000474336 PTPN5P54829 565 aa12.92□□□□□ -0.34
PKNOX1-205ENST00000474336 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
PKNOX1-205ENST00000474336 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
PKNOX1-205ENST00000474336 RYDENQ9NUL5 291 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-205ENST00000474336 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
PKNOX1-205ENST00000474336 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-205ENST00000474336 FOSBP53539 338 aa12.87□□□□□ -0.35
PKNOX1-205ENST00000474336 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
PKNOX1-205ENST00000474336 PTPREP23469 700 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms