RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 CDK11AQ9UQ88 783 aaPredicted RBP26.52■■□□□ 1.84
CPA4-205ENST00000474254 MAGI2Q86UL8 1455 aa26.51■■□□□ 1.83
CPA4-205ENST00000474254 CLIP1P30622 1438 aa26.49■■□□□ 1.83
CPA4-205ENST00000474254 KIF14Q15058 1648 aa26.49■■□□□ 1.83
CPA4-205ENST00000474254 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
CPA4-205ENST00000474254 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
CPA4-205ENST00000474254 CASKIN1Q8WXD9 1431 aa26.48■■□□□ 1.83
CPA4-205ENST00000474254 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
CPA4-205ENST00000474254 FYCO1Q9BQS8 1478 aa26.44■■□□□ 1.82
CPA4-205ENST00000474254 EFCAB2Q5VUJ9 269 aa26.44■■□□□ 1.82
CPA4-205ENST00000474254 SIGLEC1Q9BZZ2 1709 aa26.44■■□□□ 1.82
CPA4-205ENST00000474254 TROQ12816 1431 aaPredicted RBP26.42■■□□□ 1.82
CPA4-205ENST00000474254 FER1L4A9Z1Z3 1794 aa26.42■■□□□ 1.82
CPA4-205ENST00000474254 LMTK3Q96Q04 1460 aa26.42■■□□□ 1.82
CPA4-205ENST00000474254 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
CPA4-205ENST00000474254 ARHGAP5Q13017 1502 aa26.4■■□□□ 1.82
CPA4-205ENST00000474254 MLECQ14165 292 aa26.38■■□□□ 1.81
CPA4-205ENST00000474254 ATP10AO60312 1499 aa26.36■■□□□ 1.81
CPA4-205ENST00000474254 C9orf84Q5VXU9 1444 aa26.36■■□□□ 1.81
CPA4-205ENST00000474254 ZNF518AQ6AHZ1 1483 aa26.36■■□□□ 1.81
CPA4-205ENST00000474254 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
CPA4-205ENST00000474254 MYT1LQ9UL68 1186 aa26.31■■□□□ 1.8
CPA4-205ENST00000474254 CDC42BPBQ9Y5S2 1711 aa26.31■■□□□ 1.8
CPA4-205ENST00000474254 KDM5CP41229 1560 aa26.29■■□□□ 1.8
CPA4-205ENST00000474254 FBXO41Q8TF61 875 aa26.29■■□□□ 1.8
CPA4-205ENST00000474254 ARHGEF12Q9NZN5 1544 aa26.29■■□□□ 1.8
CPA4-205ENST00000474254 PREX2Q70Z35 1606 aa26.28■■□□□ 1.8
CPA4-205ENST00000474254 HSPA2P54652 639 aa26.26■■□□□ 1.79
CPA4-205ENST00000474254 CDC42BPAQ5VT25 1732 aa26.25■■□□□ 1.79
CPA4-205ENST00000474254 AFAP1Q8N556 730 aa26.24■■□□□ 1.79
CPA4-205ENST00000474254 DIP2CQ9Y2E4 1556 aa26.22■■□□□ 1.79
CPA4-205ENST00000474254 ITSN2Q9NZM3 1697 aa26.22■■□□□ 1.79
CPA4-205ENST00000474254 ABCC1P33527 1531 aa26.21■■□□□ 1.79
CPA4-205ENST00000474254 PREX1Q8TCU6 1659 aa26.21■■□□□ 1.79
CPA4-205ENST00000474254 ABCA6Q8N139 1617 aa26.19■■□□□ 1.78
CPA4-205ENST00000474254 REREQ9P2R6 1566 aa26.19■■□□□ 1.78
CPA4-205ENST00000474254 MLH3Q9UHC1 1453 aa26.17■■□□□ 1.78
CPA4-205ENST00000474254 TRAPPC8Q9Y2L5 1435 aa26.14■■□□□ 1.77
CPA4-205ENST00000474254 CEBPAP49715 358 aaPredicted RBP26.12■■□□□ 1.77
CPA4-205ENST00000474254 EHBP1L1Q8N3D4 1523 aa26.1■■□□□ 1.77
CPA4-205ENST00000474254 ESF1Q9H501 851 aaKnown RBP26.09■■□□□ 1.77
CPA4-205ENST00000474254 AGLP35573 1532 aa26.09■■□□□ 1.77
CPA4-205ENST00000474254 KIDINS220Q9ULH0 1771 aa26.08■■□□□ 1.77
CPA4-205ENST00000474254 LOC105371045A0A1W2PR82 267 aa26.08■■□□□ 1.77
CPA4-205ENST00000474254 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
CPA4-205ENST00000474254 ZNF777Q9ULD5 760 aaPredicted RBP26.07■■□□□ 1.76
CPA4-205ENST00000474254 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
CPA4-205ENST00000474254 C3P01024 1663 aa26.06■■□□□ 1.76
CPA4-205ENST00000474254 SETD1BQ9UPS6 1966 aaKnown RBP26.06■■□□□ 1.76
CPA4-205ENST00000474254 SAMD9LQ8IVG5 1584 aa26.06■■□□□ 1.76
CPA4-205ENST00000474254 GPATCH8Q9UKJ3 1502 aaKnown RBP26.05■■□□□ 1.76
CPA4-205ENST00000474254 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
CPA4-205ENST00000474254 VPS8Q8N3P4 1428 aa26.03■■□□□ 1.76
CPA4-205ENST00000474254 TIAM1Q13009 1591 aa26.02■■□□□ 1.76
CPA4-205ENST00000474254 CERKQ8TCT0 537 aa25.99■■□□□ 1.75
CPA4-205ENST00000474254 CNTLNQ9NXG0 1405 aa25.98■■□□□ 1.75
CPA4-205ENST00000474254 SUPT6HQ7KZ85 1726 aaKnown RBP25.98■■□□□ 1.75
CPA4-205ENST00000474254 PLEKHH2Q8IVE3 1493 aa25.98■■□□□ 1.75
CPA4-205ENST00000474254 STRCQ7RTU9 1775 aa25.97■■□□□ 1.75
CPA4-205ENST00000474254 CCNB3Q8WWL7 1395 aa25.97■■□□□ 1.75
CPA4-205ENST00000474254 SPAG9O60271 1321 aaKnown RBP25.97■■□□□ 1.75
CPA4-205ENST00000474254 DMRT2Q9Y5R5 561 aa25.97■■□□□ 1.75
CPA4-205ENST00000474254 CFDP1Q9UEE9 299 aaPredicted RBP25.95■■□□□ 1.74
CPA4-205ENST00000474254 ATP7AQ04656 1500 aa25.94■■□□□ 1.74
CPA4-205ENST00000474254 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
CPA4-205ENST00000474254 KIAA1107Q9UPP5 1409 aa25.93■■□□□ 1.74
CPA4-205ENST00000474254 MROH2AA6NES4 1674 aa25.93■■□□□ 1.74
CPA4-205ENST00000474254 INO80Q9ULG1 1556 aaPredicted RBP25.91■■□□□ 1.74
CPA4-205ENST00000474254 NCOA2Q15596 1464 aa25.89■■□□□ 1.73
CPA4-205ENST00000474254 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
CPA4-205ENST00000474254 PLXNC1O60486 1568 aa25.86■■□□□ 1.73
CPA4-205ENST00000474254 A2MP01023 1474 aa25.85■■□□□ 1.73
CPA4-205ENST00000474254 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
CPA4-205ENST00000474254 CLTCQ00610 1675 aaKnown RBP25.85■■□□□ 1.73
CPA4-205ENST00000474254 ADGBQ8N7X0 1667 aa25.84■■□□□ 1.73
CPA4-205ENST00000474254 PTPRTO14522 1441 aa25.83■■□□□ 1.73
CPA4-205ENST00000474254 NPATQ14207 1427 aa25.83■■□□□ 1.73
CPA4-205ENST00000474254 ZMYM3Q14202 1370 aa25.81■■□□□ 1.72
CPA4-205ENST00000474254 NCOA1Q15788 1441 aa25.78■■□□□ 1.72
CPA4-205ENST00000474254 MBD5Q9P267 1494 aa25.78■■□□□ 1.72
CPA4-205ENST00000474254 CAMSAP2Q08AD1 1489 aa25.77■■□□□ 1.72
CPA4-205ENST00000474254 CAMSAP1Q5T5Y3 1602 aa25.77■■□□□ 1.72
CPA4-205ENST00000474254 GGT6Q6P531 493 aa25.76■■□□□ 1.71
CPA4-205ENST00000474254 MYO3AQ8NEV4 1616 aa25.75■■□□□ 1.71
CPA4-205ENST00000474254 ZNF644Q9H582 1327 aaPredicted RBP25.75■■□□□ 1.71
CPA4-205ENST00000474254 ZNF142P52746 1687 aaPredicted RBP25.74■■□□□ 1.71
CPA4-205ENST00000474254 RTEL1-TNFRSF6BF6WH68 1400 aa25.71■■□□□ 1.71
CPA4-205ENST00000474254 ARHGEF5Q12774 1597 aa25.7■■□□□ 1.71
CPA4-205ENST00000474254 PPP6R1Q9UPN7 881 aa25.7■■□□□ 1.7
CPA4-205ENST00000474254 CCDC141Q6ZP82 1450 aa25.7■■□□□ 1.7
CPA4-205ENST00000474254 CEP170BQ9Y4F5 1589 aaPredicted RBP25.69■■□□□ 1.7
CPA4-205ENST00000474254 KANK4Q5T7N3 995 aaPredicted RBP25.68■■□□□ 1.7
CPA4-205ENST00000474254 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
CPA4-205ENST00000474254 LTBP4Q8N2S1 1624 aa25.67■■□□□ 1.7
CPA4-205ENST00000474254 DHX29Q7Z478 1369 aaKnown RBP25.65■■□□□ 1.7
CPA4-205ENST00000474254 MYOM3Q5VTT5 1437 aa25.64■■□□□ 1.7
CPA4-205ENST00000474254 PLA2R1Q13018 1463 aa25.64■■□□□ 1.69
CPA4-205ENST00000474254 IQSEC2Q5JU85 1478 aa25.64■■□□□ 1.69
CPA4-205ENST00000474254 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
CPA4-205ENST00000474254 MIA2Q96PC5 1412 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms