RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 UHRF1BP1LA0JNW5 1464 aa11.82□□□□□ -0.52
CCDC93-207ENST00000474006 NUP153P49790 1475 aaKnown RBP11.82□□□□□ -0.52
CCDC93-207ENST00000474006 ABCA8O94911 1581 aa11.81□□□□□ -0.52
CCDC93-207ENST00000474006 PLEKHD1A6NEE1 506 aa11.81□□□□□ -0.52
CCDC93-207ENST00000474006 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
CCDC93-207ENST00000474006 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
CCDC93-207ENST00000474006 ATP10BO94823 1461 aa11.81□□□□□ -0.52
CCDC93-207ENST00000474006 FYCO1Q9BQS8 1478 aa11.8□□□□□ -0.52
CCDC93-207ENST00000474006 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
CCDC93-207ENST00000474006 EPRSP07814 1512 aaKnown RBP11.78□□□□□ -0.52
CCDC93-207ENST00000474006 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
CCDC93-207ENST00000474006 RAPGEF6Q8TEU7 1601 aa11.77□□□□□ -0.53
CCDC93-207ENST00000474006 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
CCDC93-207ENST00000474006 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
CCDC93-207ENST00000474006 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
CCDC93-207ENST00000474006 CDK13Q14004 1512 aaKnown RBP11.75□□□□□ -0.53
CCDC93-207ENST00000474006 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
CCDC93-207ENST00000474006 ADCY10Q96PN6 1610 aa11.74□□□□□ -0.53
CCDC93-207ENST00000474006 MTUS2Q5JR59 1369 aa11.73□□□□□ -0.53
CCDC93-207ENST00000474006 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
CCDC93-207ENST00000474006 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
CCDC93-207ENST00000474006 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
CCDC93-207ENST00000474006 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
CCDC93-207ENST00000474006 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
CCDC93-207ENST00000474006 TIAM1Q13009 1591 aa11.68□□□□□ -0.54
CCDC93-207ENST00000474006 FAM69CQ0P6D2 419 aa11.67□□□□□ -0.54
CCDC93-207ENST00000474006 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
CCDC93-207ENST00000474006 ZCCHC11Q5TAX3 1644 aaKnown RBP11.66□□□□□ -0.54
CCDC93-207ENST00000474006 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
CCDC93-207ENST00000474006 LRRIQ1Q96JM4 1722 aa11.63□□□□□ -0.55
CCDC93-207ENST00000474006 CCNB3Q8WWL7 1395 aa11.62□□□□□ -0.55
CCDC93-207ENST00000474006 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
CCDC93-207ENST00000474006 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
CCDC93-207ENST00000474006 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
CCDC93-207ENST00000474006 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
CCDC93-207ENST00000474006 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
CCDC93-207ENST00000474006 EHBP1L1Q8N3D4 1523 aa11.6□□□□□ -0.55
CCDC93-207ENST00000474006 PKD2Q13563 968 aa11.6□□□□□ -0.55
CCDC93-207ENST00000474006 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
CCDC93-207ENST00000474006 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
CCDC93-207ENST00000474006 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
CCDC93-207ENST00000474006 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
CCDC93-207ENST00000474006 CFAP43Q8NDM7 1665 aa11.59□□□□□ -0.55
CCDC93-207ENST00000474006 EFCAB2Q5VUJ9 269 aa11.58□□□□□ -0.56
CCDC93-207ENST00000474006 GPATCH8Q9UKJ3 1502 aaKnown RBP11.58□□□□□ -0.56
CCDC93-207ENST00000474006 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
CCDC93-207ENST00000474006 PLCH2O75038 1416 aa11.57□□□□□ -0.56
CCDC93-207ENST00000474006 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
CCDC93-207ENST00000474006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC93-207ENST00000474006 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
CCDC93-207ENST00000474006 MYOM3Q5VTT5 1437 aa11.55□□□□□ -0.56
CCDC93-207ENST00000474006 MIER1Q8N108 512 aa11.55□□□□□ -0.56
CCDC93-207ENST00000474006 KIF14Q15058 1648 aa11.55□□□□□ -0.56
CCDC93-207ENST00000474006 TRIM26Q12899 539 aaPredicted RBP11.54□□□□□ -0.56
CCDC93-207ENST00000474006 HNRNPMP52272 730 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC93-207ENST00000474006 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.56
CCDC93-207ENST00000474006 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
CCDC93-207ENST00000474006 SUPT6HQ7KZ85 1726 aaKnown RBP11.52□□□□□ -0.56
CCDC93-207ENST00000474006 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.57
CCDC93-207ENST00000474006 GLI2P10070 1586 aa11.52□□□□□ -0.57
CCDC93-207ENST00000474006 ITGAEP38570 1179 aa11.51□□□□□ -0.57
CCDC93-207ENST00000474006 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
CCDC93-207ENST00000474006 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
CCDC93-207ENST00000474006 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
CCDC93-207ENST00000474006 ABCA9Q8IUA7 1624 aa11.49□□□□□ -0.57
CCDC93-207ENST00000474006 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
CCDC93-207ENST00000474006 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
CCDC93-207ENST00000474006 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
CCDC93-207ENST00000474006 AKNAQ7Z591 1439 aa11.48□□□□□ -0.57
CCDC93-207ENST00000474006 FANCAO15360 1455 aa11.48□□□□□ -0.57
CCDC93-207ENST00000474006 ARHGAP5Q13017 1502 aa11.48□□□□□ -0.57
CCDC93-207ENST00000474006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC93-207ENST00000474006 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
CCDC93-207ENST00000474006 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.57
CCDC93-207ENST00000474006 RAPGEF3O95398 923 aa11.46□□□□□ -0.57
CCDC93-207ENST00000474006 TSPY4P0CV99 314 aa11.46□□□□□ -0.57
CCDC93-207ENST00000474006 TSPY10P0CW01 314 aa11.46□□□□□ -0.57
CCDC93-207ENST00000474006 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
CCDC93-207ENST00000474006 PCGF6Q9BYE7 350 aa11.46□□□□□ -0.57
CCDC93-207ENST00000474006 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
CCDC93-207ENST00000474006 CHIC2Q9UKJ5 165 aa11.45□□□□□ -0.58
CCDC93-207ENST00000474006 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
CCDC93-207ENST00000474006 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
CCDC93-207ENST00000474006 NEO1Q92859 1461 aa11.44□□□□□ -0.58
CCDC93-207ENST00000474006 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
CCDC93-207ENST00000474006 MAP3K4Q9Y6R4 1608 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 TEX14Q8IWB6 1497 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 ABCC5O15440 1437 aa11.43□□□□□ -0.58
CCDC93-207ENST00000474006 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
CCDC93-207ENST00000474006 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
CCDC93-207ENST00000474006 ADGRL1O94910 1474 aa11.42□□□□□ -0.58
CCDC93-207ENST00000474006 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
CCDC93-207ENST00000474006 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
CCDC93-207ENST00000474006 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
CCDC93-207ENST00000474006 MYT1LQ9UL68 1186 aa11.41□□□□□ -0.58
CCDC93-207ENST00000474006 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms