RNA–Protein interactions for RNA: ENST00000473855.1

TNC-205, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 386 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-205ENST00000473855 CLIP1P30622 1438 aa11.17□□□□□ -0.62
TNC-205ENST00000473855 ATP10BO94823 1461 aa11.15□□□□□ -0.62
TNC-205ENST00000473855 RAPGEF6Q8TEU7 1601 aa11.15□□□□□ -0.62
TNC-205ENST00000473855 GLI2P10070 1586 aa11.15□□□□□ -0.62
TNC-205ENST00000473855 NUP153P49790 1475 aaKnown RBP11.13□□□□□ -0.63
TNC-205ENST00000473855 DIP2BQ9P265 1576 aa11.13□□□□□ -0.63
TNC-205ENST00000473855 EPRSP07814 1512 aaKnown RBP11.13□□□□□ -0.63
TNC-205ENST00000473855 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
TNC-205ENST00000473855 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
TNC-205ENST00000473855 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
TNC-205ENST00000473855 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
TNC-205ENST00000473855 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
TNC-205ENST00000473855 HECW1Q76N89 1606 aa11.1□□□□□ -0.63
TNC-205ENST00000473855 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
TNC-205ENST00000473855 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
TNC-205ENST00000473855 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
TNC-205ENST00000473855 KCNH8Q96L42 1107 aa11.09□□□□□ -0.63
TNC-205ENST00000473855 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
TNC-205ENST00000473855 TSPOAP1O95153 1857 aa11.08□□□□□ -0.64
TNC-205ENST00000473855 CD109Q6YHK3 1445 aa11.08□□□□□ -0.64
TNC-205ENST00000473855 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
TNC-205ENST00000473855 MAGI3Q5TCQ9 1506 aa11.07□□□□□ -0.64
TNC-205ENST00000473855 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
TNC-205ENST00000473855 LOC105371045A0A1W2PR82 267 aa11.04□□□□□ -0.64
TNC-205ENST00000473855 POTEHQ6S545 545 aa11.04□□□□□ -0.64
TNC-205ENST00000473855 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
TNC-205ENST00000473855 MAP3K4Q9Y6R4 1608 aa11.02□□□□□ -0.64
TNC-205ENST00000473855 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.64
TNC-205ENST00000473855 CFAP43Q8NDM7 1665 aa11.02□□□□□ -0.64
TNC-205ENST00000473855 NEO1Q92859 1461 aa11.01□□□□□ -0.65
TNC-205ENST00000473855 ABCA9Q8IUA7 1624 aa11.01□□□□□ -0.65
TNC-205ENST00000473855 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
TNC-205ENST00000473855 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
TNC-205ENST00000473855 PLCH2O75038 1416 aa10.98□□□□□ -0.65
TNC-205ENST00000473855 ARAP3Q8WWN8 1544 aa10.98□□□□□ -0.65
TNC-205ENST00000473855 PCF11O94913 1555 aaKnown RBP10.98□□□□□ -0.65
TNC-205ENST00000473855 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
TNC-205ENST00000473855 MTUS2Q5JR59 1369 aa10.97□□□□□ -0.65
TNC-205ENST00000473855 KIF14Q15058 1648 aa10.96□□□□□ -0.65
TNC-205ENST00000473855 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
TNC-205ENST00000473855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.95□□□□□ -0.66
TNC-205ENST00000473855 CFAP74Q9C0B2 1584 aa10.94□□□□□ -0.66
TNC-205ENST00000473855 FANCAO15360 1455 aa10.94□□□□□ -0.66
TNC-205ENST00000473855 AKNAQ7Z591 1439 aa10.92□□□□□ -0.66
TNC-205ENST00000473855 PPRC1Q5VV67 1664 aaKnown RBP10.92□□□□□ -0.66
TNC-205ENST00000473855 EHBP1L1Q8N3D4 1523 aa10.91□□□□□ -0.66
TNC-205ENST00000473855 HSPA2P54652 639 aa10.91□□□□□ -0.66
TNC-205ENST00000473855 CCNB3Q8WWL7 1395 aa10.9□□□□□ -0.66
TNC-205ENST00000473855 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.66
TNC-205ENST00000473855 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
TNC-205ENST00000473855 MAGI2Q86UL8 1455 aa10.88□□□□□ -0.67
TNC-205ENST00000473855 PLEKHH2Q8IVE3 1493 aa10.88□□□□□ -0.67
TNC-205ENST00000473855 COL17A1Q9UMD9 1497 aaPredicted RBP10.88□□□□□ -0.67
TNC-205ENST00000473855 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
TNC-205ENST00000473855 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
TNC-205ENST00000473855 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
TNC-205ENST00000473855 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
TNC-205ENST00000473855 ARHGAP5Q13017 1502 aa10.88□□□□□ -0.67
TNC-205ENST00000473855 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
TNC-205ENST00000473855 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
TNC-205ENST00000473855 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
TNC-205ENST00000473855 KIAA1107Q9UPP5 1409 aa10.86□□□□□ -0.67
TNC-205ENST00000473855 PTPRMP28827 1452 aa10.86□□□□□ -0.67
TNC-205ENST00000473855 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
TNC-205ENST00000473855 GPATCH8Q9UKJ3 1502 aaKnown RBP10.85□□□□□ -0.67
TNC-205ENST00000473855 RAPGEF3O95398 923 aa10.85□□□□□ -0.67
TNC-205ENST00000473855 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
TNC-205ENST00000473855 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
TNC-205ENST00000473855 MYO5CQ9NQX4 1742 aa10.84□□□□□ -0.67
TNC-205ENST00000473855 LRRIQ1Q96JM4 1722 aa10.83□□□□□ -0.68
TNC-205ENST00000473855 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
TNC-205ENST00000473855 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
TNC-205ENST00000473855 PREX2Q70Z35 1606 aa10.82□□□□□ -0.68
TNC-205ENST00000473855 ZMYM4Q5VZL5 1548 aa10.82□□□□□ -0.68
TNC-205ENST00000473855 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
TNC-205ENST00000473855 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
TNC-205ENST00000473855 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
TNC-205ENST00000473855 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
TNC-205ENST00000473855 MLH3Q9UHC1 1453 aa10.8□□□□□ -0.68
TNC-205ENST00000473855 KANK4Q5T7N3 995 aaPredicted RBP10.79□□□□□ -0.68
TNC-205ENST00000473855 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
TNC-205ENST00000473855 ITSN2Q9NZM3 1697 aa10.79□□□□□ -0.68
TNC-205ENST00000473855 ABCC1P33527 1531 aa10.79□□□□□ -0.68
TNC-205ENST00000473855 AFAP1Q8N556 730 aa10.78□□□□□ -0.68
TNC-205ENST00000473855 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
TNC-205ENST00000473855 MYOM3Q5VTT5 1437 aa10.77□□□□□ -0.68
TNC-205ENST00000473855 TSPY4P0CV99 314 aa10.77□□□□□ -0.69
TNC-205ENST00000473855 TSPY10P0CW01 314 aa10.77□□□□□ -0.69
TNC-205ENST00000473855 ZFYVE16Q7Z3T8 1539 aa10.77□□□□□ -0.69
TNC-205ENST00000473855 SPAG9O60271 1321 aaKnown RBP10.77□□□□□ -0.69
TNC-205ENST00000473855 KDM5CP41229 1560 aa10.77□□□□□ -0.69
TNC-205ENST00000473855 RTEL1-TNFRSF6BF6WH68 1400 aa10.76□□□□□ -0.69
TNC-205ENST00000473855 ATP10AO60312 1499 aa10.76□□□□□ -0.69
TNC-205ENST00000473855 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
TNC-205ENST00000473855 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
TNC-205ENST00000473855 CDC42BPBQ9Y5S2 1711 aa10.75□□□□□ -0.69
TNC-205ENST00000473855 ARHGEF40Q8TER5 1519 aa10.75□□□□□ -0.69
TNC-205ENST00000473855 FRMPD1Q5SYB0 1578 aa10.75□□□□□ -0.69
TNC-205ENST00000473855 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
TNC-205ENST00000473855 ARID4BQ4LE39 1312 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms