RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 HCSTQ9UBK5 93 aa6.29□□□□□ -1.4
CALD1-216ENST00000473714 SPOCK2Q92563 424 aa6.27□□□□□ -1.41
CALD1-216ENST00000473714 PBX2P40425 430 aa6.25□□□□□ -1.41
CALD1-216ENST00000473714 SOX12O15370 315 aa6.24□□□□□ -1.41
CALD1-216ENST00000473714 KHSRPQ92945 711 aaKnown RBP eCLIP6.24□□□□□ -1.41
CALD1-216ENST00000473714 TRIM41Q8WV44 630 aa6.2□□□□□ -1.42
CALD1-216ENST00000473714 AXIN2Q9Y2T1 843 aa6.2□□□□□ -1.42
CALD1-216ENST00000473714 NUDT7P0C024 238 aa6.18□□□□□ -1.42
CALD1-216ENST00000473714 MS4A4AQ96JQ5 239 aa6.18□□□□□ -1.42
CALD1-216ENST00000473714 PHF8Q9UPP1 1060 aa6.18□□□□□ -1.42
CALD1-216ENST00000473714 IFNLR1Q8IU57 520 aaPredicted RBP6.17□□□□□ -1.42
CALD1-216ENST00000473714 LHX6Q9UPM6 363 aa6.17□□□□□ -1.42
CALD1-216ENST00000473714 ADGRD1Q6QNK2 874 aa6.16□□□□□ -1.42
CALD1-216ENST00000473714 POTEEQ6S8J3 1075 aa6.16□□□□□ -1.42
CALD1-216ENST00000473714 ARHGAP33O14559 1287 aa6.14□□□□□ -1.43
CALD1-216ENST00000473714 NLRP6P59044 892 aa6.14□□□□□ -1.43
CALD1-216ENST00000473714 STAC3Q96MF2 364 aa6.14□□□□□ -1.43
CALD1-216ENST00000473714 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.12□□□□□ -1.43
CALD1-216ENST00000473714 PSDA5PKW4 1024 aaPredicted RBP6.12□□□□□ -1.43
CALD1-216ENST00000473714 TK2O00142 265 aa6.12□□□□□ -1.43
CALD1-216ENST00000473714 RIOK3O14730 519 aaKnown RBP6.12□□□□□ -1.43
CALD1-216ENST00000473714 RGS20O76081 388 aa6.12□□□□□ -1.43
CALD1-216ENST00000473714 ZFP91Q96JP5 570 aaPredicted RBP6.12□□□□□ -1.43
CALD1-216ENST00000473714 IRX2Q9BZI1 471 aaPredicted RBP6.12□□□□□ -1.43
CALD1-216ENST00000473714 PCDHGA4Q9Y5G9 962 aa6.12□□□□□ -1.43
CALD1-216ENST00000473714 C2orf72A6NCS6 295 aa6.11□□□□□ -1.43
CALD1-216ENST00000473714 VGFO15240 615 aaPredicted RBP6.11□□□□□ -1.43
CALD1-216ENST00000473714 SLC34A2O95436 690 aa6.11□□□□□ -1.43
CALD1-216ENST00000473714 KCTD12Q96CX2 325 aaKnown RBP6.11□□□□□ -1.43
CALD1-216ENST00000473714 KIF3CO14782 793 aa6.09□□□□□ -1.43
CALD1-216ENST00000473714 HRO43593 1189 aa6.08□□□□□ -1.44
CALD1-216ENST00000473714 PTPN5P54829 565 aa6.06□□□□□ -1.44
CALD1-216ENST00000473714 DMRTA1Q5VZB9 504 aa6.06□□□□□ -1.44
CALD1-216ENST00000473714 FBXO22Q8NEZ5 403 aa6.06□□□□□ -1.44
CALD1-216ENST00000473714 TMC2Q8TDI7 906 aa6.06□□□□□ -1.44
CALD1-216ENST00000473714 PSEN2P49810 448 aa6.05□□□□□ -1.44
CALD1-216ENST00000473714 TAOK2Q9UL54 1235 aa6.05□□□□□ -1.44
CALD1-216ENST00000473714 IFFO2Q5TF58 517 aa6.04□□□□□ -1.44
CALD1-216ENST00000473714 RNF25Q96BH1 459 aaPredicted RBP6.04□□□□□ -1.44
CALD1-216ENST00000473714 KCNH8Q96L42 1107 aa6.04□□□□□ -1.44
CALD1-216ENST00000473714 PPP4R3BQ5MIZ7 849 aa6.03□□□□□ -1.44
CALD1-216ENST00000473714 DNAJC5Q9H3Z4 198 aa6.03□□□□□ -1.44
CALD1-216ENST00000473714 BCL11BQ9C0K0 894 aaPredicted RBP6.02□□□□□ -1.45
CALD1-216ENST00000473714 MFRPQ9BY79 579 aa6.01□□□□□ -1.45
CALD1-216ENST00000473714 STK24Q9Y6E0 443 aa6.01□□□□□ -1.45
CALD1-216ENST00000473714 A0A0G2JS52 829 aa6□□□□□ -1.45
CALD1-216ENST00000473714 PTCD2Q8WV60 388 aaKnown RBP5.99□□□□□ -1.45
CALD1-216ENST00000473714 KDM4FA0A1W2PPD8 638 aa5.98□□□□□ -1.45
CALD1-216ENST00000473714 GOLGA8CPA6NN73 597 aa5.98□□□□□ -1.45
CALD1-216ENST00000473714 KCNK17Q96T54 332 aa5.98□□□□□ -1.45
CALD1-216ENST00000473714 TBC1D12O60347 775 aa5.97□□□□□ -1.45
CALD1-216ENST00000473714 Q6ZNB5 142 aa5.97□□□□□ -1.45
CALD1-216ENST00000473714 VPS9D1Q9Y2B5 631 aa5.97□□□□□ -1.45
CALD1-216ENST00000473714 STK25O00506 426 aa5.95□□□□□ -1.46
CALD1-216ENST00000473714 THSD4Q6ZMP0 1018 aa5.95□□□□□ -1.46
CALD1-216ENST00000473714 WNT2BQ93097 391 aa5.93□□□□□ -1.46
CALD1-216ENST00000473714 PLPP6Q8IY26 295 aa5.92□□□□□ -1.46
CALD1-216ENST00000473714 MRPL50Q8N5N7 158 aaKnown RBP5.92□□□□□ -1.46
CALD1-216ENST00000473714 SLC4A5Q9BY07 1137 aa5.92□□□□□ -1.46
CALD1-216ENST00000473714 FOXK1P85037 733 aa5.91□□□□□ -1.46
CALD1-216ENST00000473714 BHMG1C9JSJ3 638 aaPredicted RBP5.89□□□□□ -1.47
CALD1-216ENST00000473714 ZNF454Q8N9F8 522 aa5.89□□□□□ -1.47
CALD1-216ENST00000473714 BCL2L12Q9HB09 334 aa5.89□□□□□ -1.47
CALD1-216ENST00000473714 LAPTM4AQ15012 233 aa5.88□□□□□ -1.47
CALD1-216ENST00000473714 PPP1R37O75864 691 aa5.87□□□□□ -1.47
CALD1-216ENST00000473714 PTPREP23469 700 aa5.87□□□□□ -1.47
CALD1-216ENST00000473714 NBPF3Q9H094 633 aa5.87□□□□□ -1.47
CALD1-216ENST00000473714 ZBED2Q9BTP6 218 aa5.86□□□□□ -1.47
CALD1-216ENST00000473714 GPHNQ9NQX3 736 aaPredicted RBP5.86□□□□□ -1.47
CALD1-216ENST00000473714 ITGBL1O95965 494 aaPredicted RBP5.85□□□□□ -1.47
CALD1-216ENST00000473714 DSG2Q14126 1118 aa5.85□□□□□ -1.47
CALD1-216ENST00000473714 TRAF7Q6Q0C0 670 aa5.85□□□□□ -1.47
CALD1-216ENST00000473714 ANKK1Q8NFD2 765 aa5.83□□□□□ -1.48
CALD1-216ENST00000473714 GFRA3O60609 400 aa5.82□□□□□ -1.48
CALD1-216ENST00000473714 FOSBP53539 338 aa5.82□□□□□ -1.48
CALD1-216ENST00000473714 KCNC4Q03721 635 aa5.82□□□□□ -1.48
CALD1-216ENST00000473714 UPF1Q92900 1129 aaKnown RBP eCLIP5.82□□□□□ -1.48
CALD1-216ENST00000473714 OXER1Q8TDS5 423 aa5.81□□□□□ -1.48
CALD1-216ENST00000473714 ECM2O94769 699 aaPredicted RBP5.8□□□□□ -1.48
CALD1-216ENST00000473714 NYAP1Q6ZVC0 841 aa5.8□□□□□ -1.48
CALD1-216ENST00000473714 ZDHHC16Q969W1 377 aa5.79□□□□□ -1.48
CALD1-216ENST00000473714 BCAMP50895 628 aa5.77□□□□□ -1.49
CALD1-216ENST00000473714 JPH4Q96JJ6 628 aa5.77□□□□□ -1.49
CALD1-216ENST00000473714 ADAM33Q9BZ11 813 aa5.77□□□□□ -1.49
CALD1-216ENST00000473714 RABGEF1Q9UJ41 708 aa5.77□□□□□ -1.49
CALD1-216ENST00000473714 ABCC9O60706 1549 aa5.77□□□□□ -1.49
CALD1-216ENST00000473714 SOWAHBA6NEL2 793 aa5.76□□□□□ -1.49
CALD1-216ENST00000473714 LCE2BO14633 110 aa5.76□□□□□ -1.49
CALD1-216ENST00000473714 ANO8Q9HCE9 1232 aaPredicted RBP5.76□□□□□ -1.49
CALD1-216ENST00000473714 ZNF787Q6DD87 383 aa5.75□□□□□ -1.49
CALD1-216ENST00000473714 LAPTM4BQ86VI4 370 aa5.75□□□□□ -1.49
CALD1-216ENST00000473714 WBP1LQ9NX94 342 aa5.74□□□□□ -1.49
CALD1-216ENST00000473714 PPP1R3GB7ZBB8 358 aa5.73□□□□□ -1.49
CALD1-216ENST00000473714 NRG2O14511 850 aaPredicted RBP5.73□□□□□ -1.49
CALD1-216ENST00000473714 RGL2O15211 777 aa5.73□□□□□ -1.49
CALD1-216ENST00000473714 EVI5O60447 810 aa5.73□□□□□ -1.49
CALD1-216ENST00000473714 ZFRQ96KR1 1074 aaKnown RBP5.73□□□□□ -1.49
CALD1-216ENST00000473714 PROX2Q3B8N5 592 aa5.72□□□□□ -1.49
CALD1-216ENST00000473714 PPP1R15BQ5SWA1 713 aa5.71□□□□□ -1.5
CALD1-216ENST00000473714 PRKD2Q9BZL6 878 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms