RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
CNOT9-206ENST00000473626 TMEM92Q6UXU6 159 aa13.22□□□□□ -0.29
CNOT9-206ENST00000473626 PDE4AP27815 886 aa13.2□□□□□ -0.3
CNOT9-206ENST00000473626 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
CNOT9-206ENST00000473626 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
CNOT9-206ENST00000473626 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
CNOT9-206ENST00000473626 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
CNOT9-206ENST00000473626 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
CNOT9-206ENST00000473626 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
CNOT9-206ENST00000473626 MFSD10Q14728 455 aa13.14□□□□□ -0.31
CNOT9-206ENST00000473626 DSG2Q14126 1118 aa13.13□□□□□ -0.31
CNOT9-206ENST00000473626 KIF3CO14782 793 aa13.12□□□□□ -0.31
CNOT9-206ENST00000473626 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
CNOT9-206ENST00000473626 KCNV2Q8TDN2 545 aa13.11□□□□□ -0.31
CNOT9-206ENST00000473626 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
CNOT9-206ENST00000473626 E2F4Q16254 413 aa13.07□□□□□ -0.32
CNOT9-206ENST00000473626 FOXK1P85037 733 aa13.06□□□□□ -0.32
CNOT9-206ENST00000473626 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
CNOT9-206ENST00000473626 CAMK2BQ13554 666 aa13□□□□□ -0.33
CNOT9-206ENST00000473626 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
CNOT9-206ENST00000473626 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
CNOT9-206ENST00000473626 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
CNOT9-206ENST00000473626 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
CNOT9-206ENST00000473626 LHX8Q68G74 356 aa12.97□□□□□ -0.33
CNOT9-206ENST00000473626 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
CNOT9-206ENST00000473626 BCANQ96GW7 911 aa12.96□□□□□ -0.33
CNOT9-206ENST00000473626 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
CNOT9-206ENST00000473626 DPYSL4O14531 572 aa12.93□□□□□ -0.34
CNOT9-206ENST00000473626 NBR1Q14596 966 aa12.93□□□□□ -0.34
CNOT9-206ENST00000473626 MAMSTRQ6ZN01 415 aa12.93□□□□□ -0.34
CNOT9-206ENST00000473626 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
CNOT9-206ENST00000473626 SEMA3EO15041 775 aa12.87□□□□□ -0.35
CNOT9-206ENST00000473626 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
CNOT9-206ENST00000473626 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
CNOT9-206ENST00000473626 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
CNOT9-206ENST00000473626 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
CNOT9-206ENST00000473626 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
CNOT9-206ENST00000473626 KHSRPQ92945 711 aaKnown RBP eCLIP12.8□□□□□ -0.361e-8■■□□□ 12.4
CNOT9-206ENST00000473626 SLC34A2O95436 690 aa12.79□□□□□ -0.36
CNOT9-206ENST00000473626 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
CNOT9-206ENST00000473626 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
CNOT9-206ENST00000473626 PDIA6Q15084 440 aa12.77□□□□□ -0.37
CNOT9-206ENST00000473626 EVI5O60447 810 aa12.75□□□□□ -0.37
CNOT9-206ENST00000473626 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
CNOT9-206ENST00000473626 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
CNOT9-206ENST00000473626 DOK7Q18PE1 504 aa12.74□□□□□ -0.37
CNOT9-206ENST00000473626 TBC1D12O60347 775 aa12.73□□□□□ -0.37
CNOT9-206ENST00000473626 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
CNOT9-206ENST00000473626 NUDT7P0C024 238 aa12.71□□□□□ -0.37
CNOT9-206ENST00000473626 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.37
CNOT9-206ENST00000473626 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
CNOT9-206ENST00000473626 DDX12PQ92771 950 aa12.7□□□□□ -0.38
CNOT9-206ENST00000473626 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
CNOT9-206ENST00000473626 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
CNOT9-206ENST00000473626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
CNOT9-206ENST00000473626 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
CNOT9-206ENST00000473626 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
CNOT9-206ENST00000473626 SNPHO15079 494 aa12.65□□□□□ -0.38
CNOT9-206ENST00000473626 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
CNOT9-206ENST00000473626 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
CNOT9-206ENST00000473626 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-206ENST00000473626 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
CNOT9-206ENST00000473626 TPRNQ4KMQ1 711 aa12.62□□□□□ -0.39
CNOT9-206ENST00000473626 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
CNOT9-206ENST00000473626 PTGER2P43116 358 aa12.6□□□□□ -0.39
CNOT9-206ENST00000473626 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
CNOT9-206ENST00000473626 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
CNOT9-206ENST00000473626 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
CNOT9-206ENST00000473626 OSBPP22059 807 aa12.59□□□□□ -0.39
CNOT9-206ENST00000473626 LHX6Q9UPM6 363 aa12.59□□□□□ -0.39
CNOT9-206ENST00000473626 ST18O60284 1047 aa12.58□□□□□ -0.4
CNOT9-206ENST00000473626 SMYD5Q6GMV2 418 aa12.58□□□□□ -0.4
CNOT9-206ENST00000473626 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
CNOT9-206ENST00000473626 PCDHGA10Q9Y5H3 936 aa12.57□□□□□ -0.4
CNOT9-206ENST00000473626 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
CNOT9-206ENST00000473626 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
CNOT9-206ENST00000473626 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
CNOT9-206ENST00000473626 PHF14O94880 888 aa12.52□□□□□ -0.41
CNOT9-206ENST00000473626 FOSBP53539 338 aa12.52□□□□□ -0.41
CNOT9-206ENST00000473626 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
CNOT9-206ENST00000473626 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
CNOT9-206ENST00000473626 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
CNOT9-206ENST00000473626 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
CNOT9-206ENST00000473626 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
CNOT9-206ENST00000473626 ZC3H15Q8WU90 426 aaKnown RBP12.48□□□□□ -0.41
CNOT9-206ENST00000473626 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
CNOT9-206ENST00000473626 GPIHBP1Q8IV16 184 aa12.47□□□□□ -0.41
CNOT9-206ENST00000473626 EPAS1Q99814 870 aa12.47□□□□□ -0.41
CNOT9-206ENST00000473626 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
CNOT9-206ENST00000473626 MAP3K7O43318 606 aa12.46□□□□□ -0.41
CNOT9-206ENST00000473626 EN1Q05925 392 aaPredicted RBP12.46□□□□□ -0.41
CNOT9-206ENST00000473626 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
CNOT9-206ENST00000473626 EMP3P54852 163 aa12.45□□□□□ -0.42
CNOT9-206ENST00000473626 ERBB3P21860 1342 aa12.44□□□□□ -0.42
CNOT9-206ENST00000473626 VARS2Q5ST30 1063 aaKnown RBP12.44□□□□□ -0.42
CNOT9-206ENST00000473626 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
CNOT9-206ENST00000473626 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
CNOT9-206ENST00000473626 GPR37O15354 613 aa12.42□□□□□ -0.42
CNOT9-206ENST00000473626 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
CNOT9-206ENST00000473626 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms