RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
RAB5A-207ENST00000473608 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
RAB5A-207ENST00000473608 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAB5A-207ENST00000473608 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
RAB5A-207ENST00000473608 KHSRPQ92945 711 aaKnown RBP eCLIP12.26□□□□□ -0.457e-11■□□□□ 10.6
RAB5A-207ENST00000473608 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
RAB5A-207ENST00000473608 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
RAB5A-207ENST00000473608 PBX2P40425 430 aa12.23□□□□□ -0.45
RAB5A-207ENST00000473608 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
RAB5A-207ENST00000473608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
RAB5A-207ENST00000473608 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
RAB5A-207ENST00000473608 HCSTQ9UBK5 93 aa12.2□□□□□ -0.46
RAB5A-207ENST00000473608 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
RAB5A-207ENST00000473608 NLRP6P59044 892 aa12.17□□□□□ -0.46
RAB5A-207ENST00000473608 NUDT7P0C024 238 aa12.15□□□□□ -0.46
RAB5A-207ENST00000473608 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
RAB5A-207ENST00000473608 AXIN2Q9Y2T1 843 aa12.13□□□□□ -0.47
RAB5A-207ENST00000473608 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
RAB5A-207ENST00000473608 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
RAB5A-207ENST00000473608 KIF3CO14782 793 aa12.09□□□□□ -0.47
RAB5A-207ENST00000473608 C2orf72A6NCS6 295 aa12.08□□□□□ -0.48
RAB5A-207ENST00000473608 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
RAB5A-207ENST00000473608 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
RAB5A-207ENST00000473608 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
RAB5A-207ENST00000473608 SLC34A2O95436 690 aa12.06□□□□□ -0.48
RAB5A-207ENST00000473608 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
RAB5A-207ENST00000473608 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
RAB5A-207ENST00000473608 PSDA5PKW4 1024 aaPredicted RBP12.02□□□□□ -0.49
RAB5A-207ENST00000473608 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
RAB5A-207ENST00000473608 TK2O00142 265 aa11.98□□□□□ -0.49
RAB5A-207ENST00000473608 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
RAB5A-207ENST00000473608 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
RAB5A-207ENST00000473608 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
RAB5A-207ENST00000473608 HRO43593 1189 aa11.94□□□□□ -0.5
RAB5A-207ENST00000473608 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
RAB5A-207ENST00000473608 KCTD12Q96CX2 325 aaKnown RBP11.92□□□□□ -0.5
RAB5A-207ENST00000473608 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
RAB5A-207ENST00000473608 STK25O00506 426 aa11.88□□□□□ -0.51
RAB5A-207ENST00000473608 PSEN2P49810 448 aa11.88□□□□□ -0.51
RAB5A-207ENST00000473608 RGS20O76081 388 aa11.86□□□□□ -0.51
RAB5A-207ENST00000473608 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
RAB5A-207ENST00000473608 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
RAB5A-207ENST00000473608 PTCD2Q8WV60 388 aaKnown RBP11.84□□□□□ -0.51
RAB5A-207ENST00000473608 KCNH8Q96L42 1107 aa11.82□□□□□ -0.52
RAB5A-207ENST00000473608 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
RAB5A-207ENST00000473608 PTPN5P54829 565 aa11.79□□□□□ -0.52
RAB5A-207ENST00000473608 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
RAB5A-207ENST00000473608 TBC1D12O60347 775 aa11.77□□□□□ -0.53
RAB5A-207ENST00000473608 KCNK17Q96T54 332 aa11.75□□□□□ -0.53
RAB5A-207ENST00000473608 FOXK1P85037 733 aa11.73□□□□□ -0.53
RAB5A-207ENST00000473608 VPS9D1Q9Y2B5 631 aa11.73□□□□□ -0.53
RAB5A-207ENST00000473608 PPP1R37O75864 691 aa11.72□□□□□ -0.53
RAB5A-207ENST00000473608 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
RAB5A-207ENST00000473608 A0A0G2JS52 829 aa11.69□□□□□ -0.54
RAB5A-207ENST00000473608 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
RAB5A-207ENST00000473608 THSD4Q6ZMP0 1018 aa11.67□□□□□ -0.54
RAB5A-207ENST00000473608 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
RAB5A-207ENST00000473608 GOLGA8CPA6NN73 597 aa11.66□□□□□ -0.54
RAB5A-207ENST00000473608 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
RAB5A-207ENST00000473608 DSG2Q14126 1118 aa11.62□□□□□ -0.55
RAB5A-207ENST00000473608 BHMG1C9JSJ3 638 aaPredicted RBP11.61□□□□□ -0.55
RAB5A-207ENST00000473608 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
RAB5A-207ENST00000473608 WNT2BQ93097 391 aa11.61□□□□□ -0.55
RAB5A-207ENST00000473608 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
RAB5A-207ENST00000473608 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
RAB5A-207ENST00000473608 PTPREP23469 700 aa11.58□□□□□ -0.56
RAB5A-207ENST00000473608 RGL2O15211 777 aa11.57□□□□□ -0.56
RAB5A-207ENST00000473608 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
RAB5A-207ENST00000473608 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
RAB5A-207ENST00000473608 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
RAB5A-207ENST00000473608 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
RAB5A-207ENST00000473608 Q6ZNB5 142 aa11.52□□□□□ -0.57
RAB5A-207ENST00000473608 FOSBP53539 338 aa11.51□□□□□ -0.57
RAB5A-207ENST00000473608 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
RAB5A-207ENST00000473608 PKD2Q13563 968 aa11.46□□□□□ -0.57
RAB5A-207ENST00000473608 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
RAB5A-207ENST00000473608 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
RAB5A-207ENST00000473608 ANKK1Q8NFD2 765 aa11.43□□□□□ -0.58
RAB5A-207ENST00000473608 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
RAB5A-207ENST00000473608 ADAM33Q9BZ11 813 aa11.41□□□□□ -0.58
RAB5A-207ENST00000473608 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
RAB5A-207ENST00000473608 LAPTM4AQ15012 233 aa11.38□□□□□ -0.59
RAB5A-207ENST00000473608 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
RAB5A-207ENST00000473608 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
RAB5A-207ENST00000473608 EVI5O60447 810 aa11.37□□□□□ -0.59
RAB5A-207ENST00000473608 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
RAB5A-207ENST00000473608 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
RAB5A-207ENST00000473608 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
RAB5A-207ENST00000473608 KCNC4Q03721 635 aa11.35□□□□□ -0.59
RAB5A-207ENST00000473608 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
RAB5A-207ENST00000473608 BCAMP50895 628 aa11.33□□□□□ -0.6
RAB5A-207ENST00000473608 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
RAB5A-207ENST00000473608 PDE4AP27815 886 aa11.31□□□□□ -0.6
RAB5A-207ENST00000473608 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
RAB5A-207ENST00000473608 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
RAB5A-207ENST00000473608 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
RAB5A-207ENST00000473608 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
RAB5A-207ENST00000473608 GFRA3O60609 400 aa11.27□□□□□ -0.61
RAB5A-207ENST00000473608 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
RAB5A-207ENST00000473608 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms