RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	STK24	Q9Y6E0	443 aa		12.41	□□□□□ -0.42
BBX-223	ENST00000473542	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.39	□□□□□ -0.43
BBX-223	ENST00000473542	MFRP	Q9BY79	579 aa		12.39	□□□□□ -0.43
BBX-223	ENST00000473542	RIMBP2	O15034	1052 aa		12.38	□□□□□ -0.43
BBX-223	ENST00000473542	NLRP6	P59044	892 aa		12.38	□□□□□ -0.43
BBX-223	ENST00000473542	VARS2	Q5ST30	1063 aa	Known RBP	12.38	□□□□□ -0.43
BBX-223	ENST00000473542	ECM2	O94769	699 aa	Predicted RBP	12.37	□□□□□ -0.43
BBX-223	ENST00000473542	GPR153	Q6NV75	609 aa		12.37	□□□□□ -0.43
BBX-223	ENST00000473542	STK25	O00506	426 aa		12.35	□□□□□ -0.43
BBX-223	ENST00000473542	RGL2	O15211	777 aa		12.34	□□□□□ -0.43
BBX-223	ENST00000473542	PKD2	Q13563	968 aa		12.34	□□□□□ -0.43
BBX-223	ENST00000473542	ARSI	Q5FYB1	569 aa		12.32	□□□□□ -0.44
BBX-223	ENST00000473542	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
BBX-223	ENST00000473542	ZSWIM6	Q9HCJ5	1215 aa		12.32	□□□□□ -0.44
BBX-223	ENST00000473542	TAOK2	Q9UL54	1235 aa		12.3	□□□□□ -0.44
BBX-223	ENST00000473542	RTN4	Q9NQC3	1192 aa	Known RBP	12.27	□□□□□ -0.45
BBX-223	ENST00000473542	KIF3C	O14782	793 aa		12.26	□□□□□ -0.45
BBX-223	ENST00000473542	C2orf72	A6NCS6	295 aa		12.25	□□□□□ -0.45
BBX-223	ENST00000473542	ZNF687	Q8N1G0	1237 aa		12.25	□□□□□ -0.45
BBX-223	ENST00000473542	PPP1R37	O75864	691 aa		12.2	□□□□□ -0.46
BBX-223	ENST00000473542	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.19	□□□□□ -0.46
BBX-223	ENST00000473542	RNF166	Q96A37	237 aa	Predicted RBP	12.17	□□□□□ -0.46
BBX-223	ENST00000473542	NUDT7	P0C024	238 aa		12.16	□□□□□ -0.46
BBX-223	ENST00000473542	MYT1L	Q9UL68	1186 aa		12.13	□□□□□ -0.47
BBX-223	ENST00000473542	ANKRD13D	Q6ZTN6	518 aa		12.11	□□□□□ -0.47
BBX-223	ENST00000473542	PCDHGA4	Q9Y5G9	962 aa		12.11	□□□□□ -0.47
BBX-223	ENST00000473542	TMC2	Q8TDI7	906 aa		12.1	□□□□□ -0.47
BBX-223	ENST00000473542	POTEE	Q6S8J3	1075 aa		12.09	□□□□□ -0.47
BBX-223	ENST00000473542	LHX6	Q9UPM6	363 aa		12.09	□□□□□ -0.47
BBX-223	ENST00000473542	SLC34A2	O95436	690 aa		12.07	□□□□□ -0.48
BBX-223	ENST00000473542	LSM11	P83369	360 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
BBX-223	ENST00000473542	AXIN2	Q9Y2T1	843 aa		12.05	□□□□□ -0.48
BBX-223	ENST00000473542	HS6ST3	Q8IZP7	471 aa		12.01	□□□□□ -0.49
BBX-223	ENST00000473542	KDM4F	A0A1W2PPD8	638 aa		11.98	□□□□□ -0.49
BBX-223	ENST00000473542	PTGER2	P43116	358 aa		11.98	□□□□□ -0.49
BBX-223	ENST00000473542	PLPP6	Q8IY26	295 aa		11.96	□□□□□ -0.49
BBX-223	ENST00000473542	CHGA	P10645	457 aa	Known RBP	11.95	□□□□□ -0.5
BBX-223	ENST00000473542	PBX2	P40425	430 aa		11.95	□□□□□ -0.5
BBX-223	ENST00000473542	FOXK1	P85037	733 aa		11.94	□□□□□ -0.5
BBX-223	ENST00000473542	DSG2	Q14126	1118 aa		11.94	□□□□□ -0.5
BBX-223	ENST00000473542	NKX1-1	Q15270	411 aa	Predicted RBP	11.94	□□□□□ -0.5
BBX-223	ENST00000473542	PTCD2	Q8WV60	388 aa	Known RBP	11.93	□□□□□ -0.5
BBX-223	ENST00000473542	GPHN	Q9NQX3	736 aa	Predicted RBP	11.93	□□□□□ -0.5
BBX-223	ENST00000473542	ARHGAP33	O14559	1287 aa		11.88	□□□□□ -0.51
BBX-223	ENST00000473542	PSEN2	P49810	448 aa		11.88	□□□□□ -0.51
BBX-223	ENST00000473542	DMRTA1	Q5VZB9	504 aa		11.88	□□□□□ -0.51
BBX-223	ENST00000473542	ADGRD1	Q6QNK2	874 aa		11.87	□□□□□ -0.51
BBX-223	ENST00000473542	PSD	A5PKW4	1024 aa	Predicted RBP	11.83	□□□□□ -0.52
BBX-223	ENST00000473542	SLC24A1	O60721	1099 aa		11.83	□□□□□ -0.52
BBX-223	ENST00000473542	DNAJC5	Q9H3Z4	198 aa		11.83	□□□□□ -0.52
BBX-223	ENST00000473542	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
BBX-223	ENST00000473542	HR	O43593	1189 aa		11.79	□□□□□ -0.52
BBX-223	ENST00000473542	OXER1	Q8TDS5	423 aa		11.79	□□□□□ -0.52
BBX-223	ENST00000473542	CRISPLD2	Q9H0B8	497 aa		11.79	□□□□□ -0.52
BBX-223	ENST00000473542	PPP4R3B	Q5MIZ7	849 aa		11.78	□□□□□ -0.52
BBX-223	ENST00000473542	TBC1D12	O60347	775 aa		11.77	□□□□□ -0.53
BBX-223	ENST00000473542	NCKAP5L	Q9HCH0	1330 aa		11.76	□□□□□ -0.53
BBX-223	ENST00000473542	TK2	O00142	265 aa		11.75	□□□□□ -0.53
BBX-223	ENST00000473542	PPP1R15B	Q5SWA1	713 aa		11.75	□□□□□ -0.53
BBX-223	ENST00000473542	KCNK17	Q96T54	332 aa		11.75	□□□□□ -0.53
BBX-223	ENST00000473542	HCST	Q9UBK5	93 aa		11.73	□□□□□ -0.53
BBX-223	ENST00000473542	PLA2G2E	Q9NZK7	142 aa		11.71	□□□□□ -0.53
BBX-223	ENST00000473542	GTPBP6	O43824	516 aa	Predicted RBP	11.7	□□□□□ -0.54
BBX-223	ENST00000473542	ZNF454	Q8N9F8	522 aa		11.7	□□□□□ -0.54
BBX-223	ENST00000473542	KCTD12	Q96CX2	325 aa	Known RBP	11.7	□□□□□ -0.54
BBX-223	ENST00000473542	RYDEN	Q9NUL5	291 aa	Known RBP	11.68	□□□□□ -0.54
BBX-223	ENST00000473542	VPS9D1	Q9Y2B5	631 aa		11.67	□□□□□ -0.54
BBX-223	ENST00000473542	FOSB	P53539	338 aa		11.66	□□□□□ -0.54
BBX-223	ENST00000473542	PDE4A	P27815	886 aa		11.65	□□□□□ -0.54
BBX-223	ENST00000473542	BCL2L12	Q9HB09	334 aa		11.64	□□□□□ -0.55
BBX-223	ENST00000473542	LARP6	Q9BRS8	491 aa	Known RBP	11.63	□□□□□ -0.55
BBX-223	ENST00000473542	EVI5	O60447	810 aa		11.61	□□□□□ -0.55
BBX-223	ENST00000473542	KCNH8	Q96L42	1107 aa		11.61	□□□□□ -0.55
BBX-223	ENST00000473542	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.61	□□□□□ -0.55
BBX-223	ENST00000473542	STAC3	Q96MF2	364 aa		11.6	□□□□□ -0.55
BBX-223	ENST00000473542	DDX27	Q96GQ7	796 aa	Known RBP	11.59	□□□□□ -0.55
BBX-223	ENST00000473542	ADAM33	Q9BZ11	813 aa		11.59	□□□□□ -0.55
BBX-223	ENST00000473542	CADPS2	Q86UW7	1296 aa		11.58	□□□□□ -0.56
BBX-223	ENST00000473542	JPH4	Q96JJ6	628 aa		11.58	□□□□□ -0.56
BBX-223	ENST00000473542	ZBED2	Q9BTP6	218 aa		11.58	□□□□□ -0.56
BBX-223	ENST00000473542	EMILIN3	Q9NT22	766 aa		11.58	□□□□□ -0.56
BBX-223	ENST00000473542	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.57	□□□□□ -0.56
BBX-223	ENST00000473542	DCAF8L2	P0C7V8	631 aa		11.57	□□□□□ -0.56
BBX-223	ENST00000473542	PTPRE	P23469	700 aa		11.57	□□□□□ -0.56
BBX-223	ENST00000473542	PTPN5	P54829	565 aa		11.57	□□□□□ -0.56
BBX-223	ENST00000473542	MFSD10	Q14728	455 aa		11.57	□□□□□ -0.56
BBX-223	ENST00000473542	SLC4A5	Q9BY07	1137 aa		11.56	□□□□□ -0.56
BBX-223	ENST00000473542	ZDHHC16	Q969W1	377 aa		11.55	□□□□□ -0.56
BBX-223	ENST00000473542	MAP3K9	P80192	1104 aa		11.53	□□□□□ -0.56
BBX-223	ENST00000473542	THSD4	Q6ZMP0	1018 aa		11.5	□□□□□ -0.57
BBX-223	ENST00000473542	PCDHGA10	Q9Y5H3	936 aa		11.5	□□□□□ -0.57
BBX-223	ENST00000473542	MRPL50	Q8N5N7	158 aa	Known RBP	11.48	□□□□□ -0.57
BBX-223	ENST00000473542	COL9A1	P20849	921 aa		11.47	□□□□□ -0.57
BBX-223	ENST00000473542	PROX2	Q3B8N5	592 aa		11.47	□□□□□ -0.57
BBX-223	ENST00000473542	WNT2B	Q93097	391 aa		11.47	□□□□□ -0.57
BBX-223	ENST00000473542	GOLGA8CP	A6NN73	597 aa		11.44	□□□□□ -0.58
BBX-223	ENST00000473542	PPP1R3G	B7ZBB8	358 aa		11.42	□□□□□ -0.58
BBX-223	ENST00000473542	PLCB2	Q00722	1185 aa		11.41	□□□□□ -0.58
BBX-223	ENST00000473542	NBPF3	Q9H094	633 aa		11.4	□□□□□ -0.58
BBX-223	ENST00000473542	DPYSL4	O14531	572 aa		11.39	□□□□□ -0.59

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