RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.76
TRAIP-203ENST00000473195 RIMS1Q86UR5 1692 aaKnown RBP19.77■□□□□ 0.76
TRAIP-203ENST00000473195 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
TRAIP-203ENST00000473195 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
TRAIP-203ENST00000473195 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
TRAIP-203ENST00000473195 ZFYVE16Q7Z3T8 1539 aa19.75■□□□□ 0.75
TRAIP-203ENST00000473195 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
TRAIP-203ENST00000473195 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
TRAIP-203ENST00000473195 ARHGAP5Q13017 1502 aa19.74■□□□□ 0.75
TRAIP-203ENST00000473195 CLIP1P30622 1438 aa19.73■□□□□ 0.75
TRAIP-203ENST00000473195 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
TRAIP-203ENST00000473195 PTPRMP28827 1452 aa19.73■□□□□ 0.75
TRAIP-203ENST00000473195 POGZQ7Z3K3 1410 aa19.72■□□□□ 0.75
TRAIP-203ENST00000473195 PREX2Q70Z35 1606 aa19.72■□□□□ 0.75
TRAIP-203ENST00000473195 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
TRAIP-203ENST00000473195 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
TRAIP-203ENST00000473195 FER1L4A9Z1Z3 1794 aa19.68■□□□□ 0.74
TRAIP-203ENST00000473195 EFCAB2Q5VUJ9 269 aa19.68■□□□□ 0.74
TRAIP-203ENST00000473195 ITSN2Q9NZM3 1697 aa19.67■□□□□ 0.74
TRAIP-203ENST00000473195 SOCS7O14512 581 aa19.66■□□□□ 0.74
TRAIP-203ENST00000473195 MAGI2Q86UL8 1455 aa19.65■□□□□ 0.74
TRAIP-203ENST00000473195 KDM5CP41229 1560 aa19.63■□□□□ 0.73
TRAIP-203ENST00000473195 MLECQ14165 292 aa19.63■□□□□ 0.73
TRAIP-203ENST00000473195 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
TRAIP-203ENST00000473195 ABCC1P33527 1531 aa19.62■□□□□ 0.73
TRAIP-203ENST00000473195 ZNF518AQ6AHZ1 1483 aa19.61■□□□□ 0.73
TRAIP-203ENST00000473195 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
TRAIP-203ENST00000473195 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
TRAIP-203ENST00000473195 ARHGEF12Q9NZN5 1544 aa19.61■□□□□ 0.73
TRAIP-203ENST00000473195 DIP2CQ9Y2E4 1556 aa19.6■□□□□ 0.73
TRAIP-203ENST00000473195 ILDR2Q71H61 639 aa19.59■□□□□ 0.73
TRAIP-203ENST00000473195 ATP10AO60312 1499 aa19.59■□□□□ 0.73
TRAIP-203ENST00000473195 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
TRAIP-203ENST00000473195 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.72
TRAIP-203ENST00000473195 C9orf84Q5VXU9 1444 aa19.58■□□□□ 0.72
TRAIP-203ENST00000473195 TRAPPC8Q9Y2L5 1435 aa19.57■□□□□ 0.72
TRAIP-203ENST00000473195 KIDINS220Q9ULH0 1771 aa19.57■□□□□ 0.72
TRAIP-203ENST00000473195 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
TRAIP-203ENST00000473195 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
TRAIP-203ENST00000473195 SYCP2Q9BX26 1530 aa19.52■□□□□ 0.72
TRAIP-203ENST00000473195 GPATCH8Q9UKJ3 1502 aaKnown RBP19.52■□□□□ 0.72
TRAIP-203ENST00000473195 MLH3Q9UHC1 1453 aa19.5■□□□□ 0.71
TRAIP-203ENST00000473195 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
TRAIP-203ENST00000473195 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
TRAIP-203ENST00000473195 REREQ9P2R6 1566 aa19.49■□□□□ 0.71
TRAIP-203ENST00000473195 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
TRAIP-203ENST00000473195 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
TRAIP-203ENST00000473195 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
TRAIP-203ENST00000473195 HNRNPMP52272 730 aaKnown RBP eCLIP19.46■□□□□ 0.71
TRAIP-203ENST00000473195 C3P01024 1663 aa19.46■□□□□ 0.71
TRAIP-203ENST00000473195 DISP3Q9P2K9 1392 aa19.45■□□□□ 0.7
TRAIP-203ENST00000473195 CEBPAP49715 358 aaPredicted RBP19.45■□□□□ 0.7
TRAIP-203ENST00000473195 HSPA2P54652 639 aa19.45■□□□□ 0.7
TRAIP-203ENST00000473195 PREX1Q8TCU6 1659 aa19.45■□□□□ 0.7
TRAIP-203ENST00000473195 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
TRAIP-203ENST00000473195 INO80Q9ULG1 1556 aaPredicted RBP19.42■□□□□ 0.7
TRAIP-203ENST00000473195 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
TRAIP-203ENST00000473195 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
TRAIP-203ENST00000473195 AGLP35573 1532 aa19.4■□□□□ 0.7
TRAIP-203ENST00000473195 ZNF644Q9H582 1327 aaPredicted RBP19.39■□□□□ 0.69
TRAIP-203ENST00000473195 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
TRAIP-203ENST00000473195 SPATA31D1Q6ZQQ2 1576 aa19.36■□□□□ 0.69
TRAIP-203ENST00000473195 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
TRAIP-203ENST00000473195 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
TRAIP-203ENST00000473195 KIAA1107Q9UPP5 1409 aa19.35■□□□□ 0.69
TRAIP-203ENST00000473195 CLTCQ00610 1675 aaKnown RBP19.35■□□□□ 0.69
TRAIP-203ENST00000473195 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
TRAIP-203ENST00000473195 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
TRAIP-203ENST00000473195 PLXNC1O60486 1568 aa19.33■□□□□ 0.69
TRAIP-203ENST00000473195 STRCQ7RTU9 1775 aa19.33■□□□□ 0.68
TRAIP-203ENST00000473195 VPS8Q8N3P4 1428 aa19.33■□□□□ 0.68
TRAIP-203ENST00000473195 MROH2AA6NES4 1674 aa19.31■□□□□ 0.68
TRAIP-203ENST00000473195 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
TRAIP-203ENST00000473195 A2MP01023 1474 aa19.3■□□□□ 0.68
TRAIP-203ENST00000473195 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
TRAIP-203ENST00000473195 ESF1Q9H501 851 aaKnown RBP19.29■□□□□ 0.68
TRAIP-203ENST00000473195 LRRC9Q6ZRR7 1453 aa19.27■□□□□ 0.67
TRAIP-203ENST00000473195 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
TRAIP-203ENST00000473195 KANK4Q5T7N3 995 aaPredicted RBP19.24■□□□□ 0.67
TRAIP-203ENST00000473195 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
TRAIP-203ENST00000473195 GGT6Q6P531 493 aa19.23■□□□□ 0.67
TRAIP-203ENST00000473195 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
TRAIP-203ENST00000473195 ZMYM3Q14202 1370 aa19.19■□□□□ 0.66
TRAIP-203ENST00000473195 ARHGEF5Q12774 1597 aa19.19■□□□□ 0.66
TRAIP-203ENST00000473195 RTEL1-TNFRSF6BF6WH68 1400 aa19.19■□□□□ 0.66
TRAIP-203ENST00000473195 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
TRAIP-203ENST00000473195 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
TRAIP-203ENST00000473195 ZNF142P52746 1687 aaPredicted RBP19.15■□□□□ 0.66
TRAIP-203ENST00000473195 DHX29Q7Z478 1369 aaKnown RBP19.15■□□□□ 0.66
TRAIP-203ENST00000473195 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
TRAIP-203ENST00000473195 NPATQ14207 1427 aa19.13■□□□□ 0.65
TRAIP-203ENST00000473195 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
TRAIP-203ENST00000473195 KIF3BO15066 747 aa19.12■□□□□ 0.65
TRAIP-203ENST00000473195 CERKQ8TCT0 537 aa19.12■□□□□ 0.65
TRAIP-203ENST00000473195 MAST1Q9Y2H9 1570 aa19.11■□□□□ 0.65
TRAIP-203ENST00000473195 MYOM3Q5VTT5 1437 aa19.11■□□□□ 0.65
TRAIP-203ENST00000473195 CROCC2H7BZ55 1655 aa19.11■□□□□ 0.65
TRAIP-203ENST00000473195 CEP170BQ9Y4F5 1589 aaPredicted RBP19.1■□□□□ 0.65
TRAIP-203ENST00000473195 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
TRAIP-203ENST00000473195 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms