RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 TRAK2O60296 914 aa9.84□□□□□ -0.83
NUP35-208ENST00000472844 BCL11AQ9H165 835 aa9.83□□□□□ -0.84
NUP35-208ENST00000472844 A6NJR5 290 aa9.82□□□□□ -0.84
NUP35-208ENST00000472844 CUX2O14529 1486 aa9.81□□□□□ -0.84
NUP35-208ENST00000472844 GABBR2O75899 941 aa9.81□□□□□ -0.84
NUP35-208ENST00000472844 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
NUP35-208ENST00000472844 AK7Q96M32 723 aa9.79□□□□□ -0.84
NUP35-208ENST00000472844 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
NUP35-208ENST00000472844 NACADO15069 1562 aa9.79□□□□□ -0.84
NUP35-208ENST00000472844 ARID4BQ4LE39 1312 aaPredicted RBP9.79□□□□□ -0.84
NUP35-208ENST00000472844 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
NUP35-208ENST00000472844 PSMD1Q99460 953 aa9.78□□□□□ -0.84
NUP35-208ENST00000472844 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
NUP35-208ENST00000472844 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
NUP35-208ENST00000472844 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
NUP35-208ENST00000472844 CCDC125Q86Z20 511 aa9.77□□□□□ -0.85
NUP35-208ENST00000472844 CWC22Q9HCG8 908 aaKnown RBP9.77□□□□□ -0.85
NUP35-208ENST00000472844 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
NUP35-208ENST00000472844 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
NUP35-208ENST00000472844 CCDC97Q96F63 343 aaPredicted RBP9.76□□□□□ -0.85
NUP35-208ENST00000472844 CLSTN1O94985 981 aa9.75□□□□□ -0.85
NUP35-208ENST00000472844 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
NUP35-208ENST00000472844 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
NUP35-208ENST00000472844 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
NUP35-208ENST00000472844 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
NUP35-208ENST00000472844 ZNF592Q92610 1267 aa9.73□□□□□ -0.85
NUP35-208ENST00000472844 CLUAP1Q96AJ1 413 aa9.73□□□□□ -0.85
NUP35-208ENST00000472844 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.73□□□□□ -0.85
NUP35-208ENST00000472844 PATL2C9JE40 543 aaKnown RBP9.72□□□□□ -0.85
NUP35-208ENST00000472844 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
NUP35-208ENST00000472844 CC2D2BQ6DHV5 1058 aa9.72□□□□□ -0.85
NUP35-208ENST00000472844 CERS3Q8IU89 383 aa9.72□□□□□ -0.85
NUP35-208ENST00000472844 MYT1LQ9UL68 1186 aa9.72□□□□□ -0.85
NUP35-208ENST00000472844 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
NUP35-208ENST00000472844 IRF5Q13568 498 aa9.7□□□□□ -0.86
NUP35-208ENST00000472844 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
NUP35-208ENST00000472844 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
NUP35-208ENST00000472844 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
NUP35-208ENST00000472844 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
NUP35-208ENST00000472844 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
NUP35-208ENST00000472844 ZFP91Q96JP5 570 aaPredicted RBP9.67□□□□□ -0.86
NUP35-208ENST00000472844 ZNF777Q9ULD5 760 aaPredicted RBP9.67□□□□□ -0.86
NUP35-208ENST00000472844 STK25O00506 426 aa9.65□□□□□ -0.86
NUP35-208ENST00000472844 SEMA3EO15041 775 aa9.65□□□□□ -0.86
NUP35-208ENST00000472844 ZNF326Q5BKZ1 582 aaKnown RBP9.65□□□□□ -0.86
NUP35-208ENST00000472844 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
NUP35-208ENST00000472844 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
NUP35-208ENST00000472844 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
NUP35-208ENST00000472844 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
NUP35-208ENST00000472844 PRR29P0C7W0 189 aa9.62□□□□□ -0.87
NUP35-208ENST00000472844 PDE4DQ08499 809 aa9.62□□□□□ -0.87
NUP35-208ENST00000472844 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
NUP35-208ENST00000472844 POTEIP0CG38 1075 aa9.61□□□□□ -0.87
NUP35-208ENST00000472844 MIER1Q8N108 512 aa9.61□□□□□ -0.87
NUP35-208ENST00000472844 CHADLQ6NUI6 762 aa9.6□□□□□ -0.87
NUP35-208ENST00000472844 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
NUP35-208ENST00000472844 CCDC27Q2M243 656 aa9.59□□□□□ -0.87
NUP35-208ENST00000472844 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
NUP35-208ENST00000472844 FAM117AQ9C073 453 aa9.59□□□□□ -0.87
NUP35-208ENST00000472844 ERCC6Q03468 1493 aa9.58□□□□□ -0.88
NUP35-208ENST00000472844 TRIM66O15016 1216 aa9.57□□□□□ -0.88
NUP35-208ENST00000472844 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
NUP35-208ENST00000472844 KCNA1Q09470 495 aa9.57□□□□□ -0.88
NUP35-208ENST00000472844 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
NUP35-208ENST00000472844 ANKRD13AQ8IZ07 590 aa9.57□□□□□ -0.88
NUP35-208ENST00000472844 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
NUP35-208ENST00000472844 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
NUP35-208ENST00000472844 ACIN1Q9UKV3 1341 aaKnown RBP9.54□□□□□ -0.88
NUP35-208ENST00000472844 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
NUP35-208ENST00000472844 SPATA32Q96LK8 384 aa9.53□□□□□ -0.88
NUP35-208ENST00000472844 IGSF5Q9NSI5 407 aa9.53□□□□□ -0.88
NUP35-208ENST00000472844 VGFO15240 615 aaPredicted RBP9.52□□□□□ -0.89
NUP35-208ENST00000472844 KDM4AO75164 1064 aa9.52□□□□□ -0.89
NUP35-208ENST00000472844 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
NUP35-208ENST00000472844 CADPSQ9ULU8 1353 aa9.51□□□□□ -0.89
NUP35-208ENST00000472844 PLEKHG3A1L390 1219 aa9.51□□□□□ -0.89
NUP35-208ENST00000472844 POTEMA6NI47 508 aa9.51□□□□□ -0.89
NUP35-208ENST00000472844 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
NUP35-208ENST00000472844 TMED8Q6PL24 325 aaPredicted RBP9.51□□□□□ -0.89
NUP35-208ENST00000472844 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
NUP35-208ENST00000472844 GSE1Q14687 1217 aa9.5□□□□□ -0.89
NUP35-208ENST00000472844 E2F4Q16254 413 aa9.5□□□□□ -0.89
NUP35-208ENST00000472844 PKNOX2Q96KN3 472 aa9.5□□□□□ -0.89
NUP35-208ENST00000472844 BRD1O95696 1058 aa9.49□□□□□ -0.89
NUP35-208ENST00000472844 FGD1P98174 961 aa9.49□□□□□ -0.89
NUP35-208ENST00000472844 STK24Q9Y6E0 443 aa9.49□□□□□ -0.89
NUP35-208ENST00000472844 UNCXA6NJT0 531 aa9.48□□□□□ -0.89
NUP35-208ENST00000472844 IRX6P78412 446 aaPredicted RBP9.48□□□□□ -0.89
NUP35-208ENST00000472844 MCM6Q14566 821 aa9.48□□□□□ -0.89
NUP35-208ENST00000472844 FNBP4Q8N3X1 1017 aaPredicted RBP9.48□□□□□ -0.89
NUP35-208ENST00000472844 PRDM16Q9HAZ2 1276 aa9.48□□□□□ -0.89
NUP35-208ENST00000472844 NOL8Q76FK4 1167 aaKnown RBP9.46□□□□□ -0.9
NUP35-208ENST00000472844 GPIHBP1Q8IV16 184 aa9.46□□□□□ -0.9
NUP35-208ENST00000472844 DRC1Q96MC2 740 aa9.46□□□□□ -0.9
NUP35-208ENST00000472844 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
NUP35-208ENST00000472844 POTEGQ6S5H5 508 aa9.45□□□□□ -0.9
NUP35-208ENST00000472844 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
NUP35-208ENST00000472844 ILDR1Q86SU0 546 aaPredicted RBP9.44□□□□□ -0.9
NUP35-208ENST00000472844 PLEKHD1A6NEE1 506 aa9.42□□□□□ -0.9
NUP35-208ENST00000472844 SETQ01105 290 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms