RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
CLK1-209ENST00000472679 WDR70Q9NW82 654 aa13.92□□□□□ -0.18
CLK1-209ENST00000472679 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
CLK1-209ENST00000472679 TMEM92Q6UXU6 159 aa13.91□□□□□ -0.18
CLK1-209ENST00000472679 MFSD10Q14728 455 aa13.9□□□□□ -0.18
CLK1-209ENST00000472679 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.18
CLK1-209ENST00000472679 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
CLK1-209ENST00000472679 C2orf72A6NCS6 295 aa13.86□□□□□ -0.19
CLK1-209ENST00000472679 KIF3CO14782 793 aa13.86□□□□□ -0.19
CLK1-209ENST00000472679 TMC2Q8TDI7 906 aa13.85□□□□□ -0.19
CLK1-209ENST00000472679 DSG2Q14126 1118 aa13.84□□□□□ -0.19
CLK1-209ENST00000472679 C3orf67Q6ZVT6 689 aa13.84□□□□□ -0.19
CLK1-209ENST00000472679 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
CLK1-209ENST00000472679 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
CLK1-209ENST00000472679 E2F4Q16254 413 aa13.8□□□□□ -0.2
CLK1-209ENST00000472679 FOXK1P85037 733 aa13.79□□□□□ -0.2
CLK1-209ENST00000472679 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
CLK1-209ENST00000472679 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
CLK1-209ENST00000472679 CAMK2BQ13554 666 aa13.75□□□□□ -0.21
CLK1-209ENST00000472679 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
CLK1-209ENST00000472679 BCANQ96GW7 911 aa13.74□□□□□ -0.21
CLK1-209ENST00000472679 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
CLK1-209ENST00000472679 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
CLK1-209ENST00000472679 NBR1Q14596 966 aa13.66□□□□□ -0.22
CLK1-209ENST00000472679 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
CLK1-209ENST00000472679 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
CLK1-209ENST00000472679 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
CLK1-209ENST00000472679 ARIH1Q9Y4X5 557 aaPredicted RBP13.63□□□□□ -0.23
CLK1-209ENST00000472679 LHX8Q68G74 356 aa13.62□□□□□ -0.23
CLK1-209ENST00000472679 DPYSL4O14531 572 aa13.61□□□□□ -0.23
CLK1-209ENST00000472679 OTUD5Q96G74 571 aa13.61□□□□□ -0.23
CLK1-209ENST00000472679 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLK1-209ENST00000472679 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
CLK1-209ENST00000472679 SEMA3EO15041 775 aa13.55□□□□□ -0.24
CLK1-209ENST00000472679 SLC34A2O95436 690 aa13.53□□□□□ -0.24
CLK1-209ENST00000472679 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
CLK1-209ENST00000472679 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
CLK1-209ENST00000472679 PTCD2Q8WV60 388 aaKnown RBP13.53□□□□□ -0.24
CLK1-209ENST00000472679 PDIA6Q15084 440 aa13.5□□□□□ -0.25
CLK1-209ENST00000472679 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
CLK1-209ENST00000472679 PCDHGA4Q9Y5G9 962 aa13.47□□□□□ -0.25
CLK1-209ENST00000472679 SPDYE16A6NNV3 312 aaPredicted RBP13.46□□□□□ -0.25
CLK1-209ENST00000472679 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
CLK1-209ENST00000472679 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
CLK1-209ENST00000472679 EVI5O60447 810 aa13.44□□□□□ -0.26
CLK1-209ENST00000472679 TBC1D12O60347 775 aa13.43□□□□□ -0.26
CLK1-209ENST00000472679 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLK1-209ENST00000472679 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
CLK1-209ENST00000472679 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
CLK1-209ENST00000472679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLK1-209ENST00000472679 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
CLK1-209ENST00000472679 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
CLK1-209ENST00000472679 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
CLK1-209ENST00000472679 SNPHO15079 494 aa13.36□□□□□ -0.27
CLK1-209ENST00000472679 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
CLK1-209ENST00000472679 NUDT7P0C024 238 aa13.35□□□□□ -0.27
CLK1-209ENST00000472679 DDX12PQ92771 950 aa13.35□□□□□ -0.27
CLK1-209ENST00000472679 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
CLK1-209ENST00000472679 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
CLK1-209ENST00000472679 PTGER2P43116 358 aa13.34□□□□□ -0.27
CLK1-209ENST00000472679 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
CLK1-209ENST00000472679 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
CLK1-209ENST00000472679 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
CLK1-209ENST00000472679 SMYD5Q6GMV2 418 aa13.31□□□□□ -0.28
CLK1-209ENST00000472679 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
CLK1-209ENST00000472679 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
CLK1-209ENST00000472679 RBM26Q5T8P6 1007 aaKnown RBP13.3□□□□□ -0.28
CLK1-209ENST00000472679 OSBPP22059 807 aa13.28□□□□□ -0.28
CLK1-209ENST00000472679 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
CLK1-209ENST00000472679 HOXB1P14653 301 aaPredicted RBP13.27□□□□□ -0.29
CLK1-209ENST00000472679 PCDHGA10Q9Y5H3 936 aa13.25□□□□□ -0.29
CLK1-209ENST00000472679 LHX6Q9UPM6 363 aa13.24□□□□□ -0.29
CLK1-209ENST00000472679 ST18O60284 1047 aa13.23□□□□□ -0.29
CLK1-209ENST00000472679 PHF14O94880 888 aa13.22□□□□□ -0.29
CLK1-209ENST00000472679 FOSBP53539 338 aa13.22□□□□□ -0.29
CLK1-209ENST00000472679 JPH4Q96JJ6 628 aa13.21□□□□□ -0.29
CLK1-209ENST00000472679 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
CLK1-209ENST00000472679 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
CLK1-209ENST00000472679 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
CLK1-209ENST00000472679 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
CLK1-209ENST00000472679 EPAS1Q99814 870 aa13.18□□□□□ -0.3
CLK1-209ENST00000472679 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
CLK1-209ENST00000472679 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
CLK1-209ENST00000472679 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
CLK1-209ENST00000472679 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
CLK1-209ENST00000472679 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
CLK1-209ENST00000472679 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
CLK1-209ENST00000472679 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
CLK1-209ENST00000472679 GPR37O15354 613 aa13.12□□□□□ -0.31
CLK1-209ENST00000472679 MAP3K7O43318 606 aa13.12□□□□□ -0.31
CLK1-209ENST00000472679 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
CLK1-209ENST00000472679 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
CLK1-209ENST00000472679 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
CLK1-209ENST00000472679 CDHR5Q9HBB8 845 aa13.12□□□□□ -0.31
CLK1-209ENST00000472679 EMP3P54852 163 aa13.09□□□□□ -0.31
CLK1-209ENST00000472679 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
CLK1-209ENST00000472679 ERBB3P21860 1342 aa13.08□□□□□ -0.32
CLK1-209ENST00000472679 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
CLK1-209ENST00000472679 ZMYND10O75800 440 aa13.07□□□□□ -0.32
CLK1-209ENST00000472679 C6orf132Q5T0Z8 1188 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms