RNA–Protein interactions for RNA: ENST00000472659.1

PKD1-209, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-209ENST00000472659 ARHGAP5Q13017 1502 aa29.89■■■□□ 2.38
PKD1-209ENST00000472659 ARHGEF40Q8TER5 1519 aa29.89■■■□□ 2.38
PKD1-209ENST00000472659 POGZQ7Z3K3 1410 aa29.88■■■□□ 2.37
PKD1-209ENST00000472659 EFCAB2Q5VUJ9 269 aa29.87■■■□□ 2.37
PKD1-209ENST00000472659 SCAPERQ9BY12 1400 aa29.87■■■□□ 2.37
PKD1-209ENST00000472659 CDC42BPAQ5VT25 1732 aa29.84■■■□□ 2.37
PKD1-209ENST00000472659 MAGI2Q86UL8 1455 aa29.8■■■□□ 2.36
PKD1-209ENST00000472659 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
PKD1-209ENST00000472659 ZFYVE16Q7Z3T8 1539 aa29.78■■■□□ 2.36
PKD1-209ENST00000472659 ABCC1P33527 1531 aa29.77■■■□□ 2.36
PKD1-209ENST00000472659 EHBP1L1Q8N3D4 1523 aa29.77■■■□□ 2.36
PKD1-209ENST00000472659 MTUS2Q5JR59 1369 aa29.77■■■□□ 2.36
PKD1-209ENST00000472659 YEATS2Q9ULM3 1422 aa29.76■■■□□ 2.35
PKD1-209ENST00000472659 GPATCH8Q9UKJ3 1502 aaKnown RBP29.76■■■□□ 2.35
PKD1-209ENST00000472659 ZNF518AQ6AHZ1 1483 aa29.75■■■□□ 2.35
PKD1-209ENST00000472659 KDM5CP41229 1560 aa29.75■■■□□ 2.35
PKD1-209ENST00000472659 ITSN2Q9NZM3 1697 aa29.71■■■□□ 2.35
PKD1-209ENST00000472659 ARHGEF12Q9NZN5 1544 aa29.71■■■□□ 2.35
PKD1-209ENST00000472659 ADAMTSL3P82987 1691 aa29.7■■■□□ 2.35
PKD1-209ENST00000472659 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
PKD1-209ENST00000472659 BCORL1Q5H9F3 1711 aa29.69■■■□□ 2.34
PKD1-209ENST00000472659 SIGLEC1Q9BZZ2 1709 aa29.69■■■□□ 2.34
PKD1-209ENST00000472659 SAMD9LQ8IVG5 1584 aa29.69■■■□□ 2.34
PKD1-209ENST00000472659 HECW2Q9P2P5 1572 aa29.65■■■□□ 2.34
PKD1-209ENST00000472659 TRAPPC8Q9Y2L5 1435 aa29.65■■■□□ 2.34
PKD1-209ENST00000472659 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.34
PKD1-209ENST00000472659 AFAP1Q8N556 730 aa29.64■■■□□ 2.34
PKD1-209ENST00000472659 ATP10AO60312 1499 aa29.61■■■□□ 2.33
PKD1-209ENST00000472659 MLH3Q9UHC1 1453 aa29.61■■■□□ 2.33
PKD1-209ENST00000472659 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
PKD1-209ENST00000472659 C9orf84Q5VXU9 1444 aa29.59■■■□□ 2.33
PKD1-209ENST00000472659 MAP3K1Q13233 1512 aa29.59■■■□□ 2.33
PKD1-209ENST00000472659 MADDQ8WXG6 1647 aa29.59■■■□□ 2.33
PKD1-209ENST00000472659 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
PKD1-209ENST00000472659 ARID4BQ4LE39 1312 aaPredicted RBP29.58■■■□□ 2.33
PKD1-209ENST00000472659 DIP2CQ9Y2E4 1556 aa29.58■■■□□ 2.33
PKD1-209ENST00000472659 ABCA6Q8N139 1617 aa29.56■■■□□ 2.32
PKD1-209ENST00000472659 NCOA2Q15596 1464 aa29.56■■■□□ 2.32
PKD1-209ENST00000472659 LRRC9Q6ZRR7 1453 aa29.56■■■□□ 2.32
PKD1-209ENST00000472659 KIAA1107Q9UPP5 1409 aa29.56■■■□□ 2.32
PKD1-209ENST00000472659 CFDP1Q9UEE9 299 aaPredicted RBP29.56■■■□□ 2.32
PKD1-209ENST00000472659 PTPRMP28827 1452 aa29.55■■■□□ 2.32
PKD1-209ENST00000472659 PLEKHH2Q8IVE3 1493 aa29.55■■■□□ 2.32
PKD1-209ENST00000472659 ZNF777Q9ULD5 760 aaPredicted RBP29.54■■■□□ 2.32
PKD1-209ENST00000472659 REREQ9P2R6 1566 aa29.54■■■□□ 2.32
PKD1-209ENST00000472659 KIDINS220Q9ULH0 1771 aa29.53■■■□□ 2.32
PKD1-209ENST00000472659 RIMS1Q86UR5 1692 aaKnown RBP29.47■■■□□ 2.31
PKD1-209ENST00000472659 HNRNPMP52272 730 aaKnown RBP eCLIP29.46■■■□□ 2.31
PKD1-209ENST00000472659 INO80Q9ULG1 1556 aaPredicted RBP29.46■■■□□ 2.31
PKD1-209ENST00000472659 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.3
PKD1-209ENST00000472659 MBD5Q9P267 1494 aa29.44■■■□□ 2.3
PKD1-209ENST00000472659 KANK4Q5T7N3 995 aaPredicted RBP29.43■■■□□ 2.3
PKD1-209ENST00000472659 AGLP35573 1532 aa29.42■■■□□ 2.3
PKD1-209ENST00000472659 ATP7AQ04656 1500 aa29.42■■■□□ 2.3
PKD1-209ENST00000472659 MYT1LQ9UL68 1186 aa29.42■■■□□ 2.3
PKD1-209ENST00000472659 FER1L4A9Z1Z3 1794 aa29.41■■■□□ 2.3
PKD1-209ENST00000472659 CAMSAP2Q08AD1 1489 aa29.4■■■□□ 2.3
PKD1-209ENST00000472659 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
PKD1-209ENST00000472659 MLECQ14165 292 aa29.36■■■□□ 2.29
PKD1-209ENST00000472659 PLXNC1O60486 1568 aa29.33■■■□□ 2.29
PKD1-209ENST00000472659 ILDR1Q86SU0 546 aaPredicted RBP29.32■■■□□ 2.28
PKD1-209ENST00000472659 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
PKD1-209ENST00000472659 ARHGEF5Q12774 1597 aa29.3■■■□□ 2.28
PKD1-209ENST00000472659 MYOM3Q5VTT5 1437 aa29.29■■■□□ 2.28
PKD1-209ENST00000472659 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
PKD1-209ENST00000472659 ADGBQ8N7X0 1667 aa29.27■■■□□ 2.28
PKD1-209ENST00000472659 MIA2Q96PC5 1412 aa29.27■■■□□ 2.28
PKD1-209ENST00000472659 A2MP01023 1474 aa29.26■■■□□ 2.27
PKD1-209ENST00000472659 LMTK3Q96Q04 1460 aa29.26■■■□□ 2.27
PKD1-209ENST00000472659 APLP2Q06481 763 aa29.24■■■□□ 2.27
PKD1-209ENST00000472659 RSPH4AQ5TD94 716 aa29.21■■■□□ 2.27
PKD1-209ENST00000472659 MAST1Q9Y2H9 1570 aa29.15■■■□□ 2.26
PKD1-209ENST00000472659 C3P01024 1663 aa29.14■■■□□ 2.26
PKD1-209ENST00000472659 CNTLNQ9NXG0 1405 aa29.13■■■□□ 2.25
PKD1-209ENST00000472659 PLPPR3Q6T4P5 718 aa29.12■■■□□ 2.25
PKD1-209ENST00000472659 PTPN23Q9H3S7 1636 aa29.12■■■□□ 2.25
PKD1-209ENST00000472659 DHX29Q7Z478 1369 aaKnown RBP29.12■■■□□ 2.25
PKD1-209ENST00000472659 MROH2AA6NES4 1674 aa29.11■■■□□ 2.25
PKD1-209ENST00000472659 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
PKD1-209ENST00000472659 CEBPAP49715 358 aaPredicted RBP29.1■■■□□ 2.25
PKD1-209ENST00000472659 TCOF1Q13428 1488 aaKnown RBP29.09■■■□□ 2.25
PKD1-209ENST00000472659 PREX1Q8TCU6 1659 aa29.08■■■□□ 2.25
PKD1-209ENST00000472659 TSPY4P0CV99 314 aa29.06■■■□□ 2.24
PKD1-209ENST00000472659 TSPY10P0CW01 314 aa29.06■■■□□ 2.24
PKD1-209ENST00000472659 SETD1BQ9UPS6 1966 aaKnown RBP29.06■■■□□ 2.24
PKD1-209ENST00000472659 CROCC2H7BZ55 1655 aa29.05■■■□□ 2.24
PKD1-209ENST00000472659 ESF1Q9H501 851 aaKnown RBP29.05■■■□□ 2.24
PKD1-209ENST00000472659 CLTCQ00610 1675 aaKnown RBP29.05■■■□□ 2.24
PKD1-209ENST00000472659 SHANK2Q9UPX8 1470 aa29.03■■■□□ 2.24
PKD1-209ENST00000472659 DNMT1P26358 1616 aaKnown RBP29.02■■■□□ 2.24
PKD1-209ENST00000472659 ABCC5O15440 1437 aa29.01■■■□□ 2.23
PKD1-209ENST00000472659 HSPA2P54652 639 aa29■■■□□ 2.23
PKD1-209ENST00000472659 FBXO41Q8TF61 875 aa29■■■□□ 2.23
PKD1-209ENST00000472659 GGT6Q6P531 493 aa28.99■■■□□ 2.23
PKD1-209ENST00000472659 PPP6R1Q9UPN7 881 aa28.98■■■□□ 2.23
PKD1-209ENST00000472659 ZMYM3Q14202 1370 aa28.98■■■□□ 2.23
PKD1-209ENST00000472659 DAPK1P53355 1430 aa28.97■■■□□ 2.23
PKD1-209ENST00000472659 FAM135AQ9P2D6 1515 aa28.97■■■□□ 2.23
PKD1-209ENST00000472659 NPATQ14207 1427 aa28.95■■■□□ 2.23
PKD1-209ENST00000472659 RNF17Q9BXT8 1623 aaKnown RBP28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms