RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
LINC02339-201ENST00000472649 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
LINC02339-201ENST00000472649 PKD2Q13563 968 aa12.58□□□□□ -0.4
LINC02339-201ENST00000472649 RGL2O15211 777 aa12.56□□□□□ -0.4
LINC02339-201ENST00000472649 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
LINC02339-201ENST00000472649 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
LINC02339-201ENST00000472649 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
LINC02339-201ENST00000472649 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
LINC02339-201ENST00000472649 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
LINC02339-201ENST00000472649 ERBB3P21860 1342 aa12.5□□□□□ -0.41
LINC02339-201ENST00000472649 TMEM92Q6UXU6 159 aa12.49□□□□□ -0.41
LINC02339-201ENST00000472649 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
LINC02339-201ENST00000472649 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
LINC02339-201ENST00000472649 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
LINC02339-201ENST00000472649 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
LINC02339-201ENST00000472649 GPR153Q6NV75 609 aa12.36□□□□□ -0.43
LINC02339-201ENST00000472649 HS6ST3Q8IZP7 471 aa12.36□□□□□ -0.43
LINC02339-201ENST00000472649 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
LINC02339-201ENST00000472649 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
LINC02339-201ENST00000472649 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
LINC02339-201ENST00000472649 KIF3CO14782 793 aa12.31□□□□□ -0.44
LINC02339-201ENST00000472649 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
LINC02339-201ENST00000472649 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
LINC02339-201ENST00000472649 PTGER2P43116 358 aa12.27□□□□□ -0.45
LINC02339-201ENST00000472649 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
LINC02339-201ENST00000472649 PPP1R37O75864 691 aa12.25□□□□□ -0.45
LINC02339-201ENST00000472649 SLC34A2O95436 690 aa12.24□□□□□ -0.45
LINC02339-201ENST00000472649 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC02339-201ENST00000472649 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
LINC02339-201ENST00000472649 NUDT7P0C024 238 aa12.2□□□□□ -0.46
LINC02339-201ENST00000472649 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
LINC02339-201ENST00000472649 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
LINC02339-201ENST00000472649 PBX2P40425 430 aa12.16□□□□□ -0.46
LINC02339-201ENST00000472649 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
LINC02339-201ENST00000472649 TBC1D12O60347 775 aa12.14□□□□□ -0.47
LINC02339-201ENST00000472649 FOXK1P85037 733 aa12.14□□□□□ -0.47
LINC02339-201ENST00000472649 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
LINC02339-201ENST00000472649 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
LINC02339-201ENST00000472649 PLPP6Q8IY26 295 aa12.13□□□□□ -0.47
LINC02339-201ENST00000472649 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
LINC02339-201ENST00000472649 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC02339-201ENST00000472649 PTCD2Q8WV60 388 aaKnown RBP12.09□□□□□ -0.47
LINC02339-201ENST00000472649 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
LINC02339-201ENST00000472649 DSG2Q14126 1118 aa12.07□□□□□ -0.48
LINC02339-201ENST00000472649 KCNH8Q96L42 1107 aa12.03□□□□□ -0.48
LINC02339-201ENST00000472649 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.49
LINC02339-201ENST00000472649 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
LINC02339-201ENST00000472649 PDE4AP27815 886 aa12.01□□□□□ -0.49
LINC02339-201ENST00000472649 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
LINC02339-201ENST00000472649 PPP1R15BQ5SWA1 713 aa11.99□□□□□ -0.49
LINC02339-201ENST00000472649 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
LINC02339-201ENST00000472649 CRISPLD2Q9H0B8 497 aa11.98□□□□□ -0.49
LINC02339-201ENST00000472649 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC02339-201ENST00000472649 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
LINC02339-201ENST00000472649 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
LINC02339-201ENST00000472649 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
LINC02339-201ENST00000472649 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
LINC02339-201ENST00000472649 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
LINC02339-201ENST00000472649 STAC3Q96MF2 364 aa11.92□□□□□ -0.5
LINC02339-201ENST00000472649 TK2O00142 265 aa11.91□□□□□ -0.5
LINC02339-201ENST00000472649 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
LINC02339-201ENST00000472649 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
LINC02339-201ENST00000472649 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
LINC02339-201ENST00000472649 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
LINC02339-201ENST00000472649 ZNF454Q8N9F8 522 aa11.88□□□□□ -0.51
LINC02339-201ENST00000472649 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
LINC02339-201ENST00000472649 PSEN2P49810 448 aa11.86□□□□□ -0.51
LINC02339-201ENST00000472649 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
LINC02339-201ENST00000472649 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
LINC02339-201ENST00000472649 EVI5O60447 810 aa11.81□□□□□ -0.52
LINC02339-201ENST00000472649 MFSD10Q14728 455 aa11.81□□□□□ -0.52
LINC02339-201ENST00000472649 PTPREP23469 700 aa11.8□□□□□ -0.52
LINC02339-201ENST00000472649 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
LINC02339-201ENST00000472649 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
LINC02339-201ENST00000472649 FOSBP53539 338 aa11.79□□□□□ -0.52
LINC02339-201ENST00000472649 HRO43593 1189 aa11.77□□□□□ -0.53
LINC02339-201ENST00000472649 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
LINC02339-201ENST00000472649 BBXQ8WY36 941 aaPredicted RBP11.75□□□□□ -0.53
LINC02339-201ENST00000472649 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
LINC02339-201ENST00000472649 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
LINC02339-201ENST00000472649 SLC4A5Q9BY07 1137 aa11.73□□□□□ -0.53
LINC02339-201ENST00000472649 VPS9D1Q9Y2B5 631 aa11.73□□□□□ -0.53
LINC02339-201ENST00000472649 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
LINC02339-201ENST00000472649 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
LINC02339-201ENST00000472649 GOLGA8CPA6NN73 597 aa11.71□□□□□ -0.53
LINC02339-201ENST00000472649 RGS20O76081 388 aa11.69□□□□□ -0.54
LINC02339-201ENST00000472649 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
LINC02339-201ENST00000472649 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
LINC02339-201ENST00000472649 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
LINC02339-201ENST00000472649 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
LINC02339-201ENST00000472649 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
LINC02339-201ENST00000472649 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
LINC02339-201ENST00000472649 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
LINC02339-201ENST00000472649 TYW1BQ6NUM6 668 aa11.65□□□□□ -0.54
LINC02339-201ENST00000472649 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
LINC02339-201ENST00000472649 PHF14O94880 888 aa11.64□□□□□ -0.55
LINC02339-201ENST00000472649 PPP1R3GB7ZBB8 358 aa11.63□□□□□ -0.55
LINC02339-201ENST00000472649 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
LINC02339-201ENST00000472649 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
LINC02339-201ENST00000472649 PTPN5P54829 565 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms