RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SHROOM4Q9ULL8 1493 aa7.3□□□□□ -1.24
XRN1-209ENST00000472625 CHGAP10645 457 aaKnown RBP7.29□□□□□ -1.24
XRN1-209ENST00000472625 DCAF8L2P0C7V8 631 aa7.28□□□□□ -1.24
XRN1-209ENST00000472625 TMEM92Q6UXU6 159 aa7.28□□□□□ -1.24
XRN1-209ENST00000472625 TMEM121BQ9BXQ6 578 aaPredicted RBP7.28□□□□□ -1.24
XRN1-209ENST00000472625 TAOK2Q9UL54 1235 aa7.27□□□□□ -1.25
XRN1-209ENST00000472625 NLRP6P59044 892 aa7.26□□□□□ -1.25
XRN1-209ENST00000472625 SNPHO15079 494 aa7.25□□□□□ -1.25
XRN1-209ENST00000472625 PPP1R37O75864 691 aa7.25□□□□□ -1.25
XRN1-209ENST00000472625 DCAF1Q9Y4B6 1507 aa7.24□□□□□ -1.25
XRN1-209ENST00000472625 HOXB3P14651 431 aaPredicted RBP7.24□□□□□ -1.25
XRN1-209ENST00000472625 MMRN1Q13201 1228 aa7.24□□□□□ -1.25
XRN1-209ENST00000472625 GTPBP6O43824 516 aaPredicted RBP7.22□□□□□ -1.25
XRN1-209ENST00000472625 EMP3P54852 163 aa7.21□□□□□ -1.26
XRN1-209ENST00000472625 ZCCHC6Q5VYS8 1495 aaKnown RBP7.21□□□□□ -1.26
XRN1-209ENST00000472625 POTEB3A0JP26 581 aa7.19□□□□□ -1.26
XRN1-209ENST00000472625 POTEBQ6S5H4 581 aa7.19□□□□□ -1.26
XRN1-209ENST00000472625 BICRAQ9NZM4 1560 aa7.19□□□□□ -1.26
XRN1-209ENST00000472625 UNC13AQ9UPW8 1703 aa7.18□□□□□ -1.26
XRN1-209ENST00000472625 FAM205CA6NFA0 338 aa7.18□□□□□ -1.26
XRN1-209ENST00000472625 SPNS2Q8IVW8 549 aa7.18□□□□□ -1.26
XRN1-209ENST00000472625 ZNF710Q8N1W2 664 aa7.18□□□□□ -1.26
XRN1-209ENST00000472625 DOK7Q18PE1 504 aa7.16□□□□□ -1.26
XRN1-209ENST00000472625 BBXQ8WY36 941 aaPredicted RBP7.16□□□□□ -1.26
XRN1-209ENST00000472625 HS3ST6Q96QI5 342 aa7.16□□□□□ -1.26
XRN1-209ENST00000472625 C2orf72A6NCS6 295 aa7.14□□□□□ -1.27
XRN1-209ENST00000472625 KIF3CO14782 793 aa7.14□□□□□ -1.27
XRN1-209ENST00000472625 KHSRPQ92945 711 aaKnown RBP eCLIP7.13□□□□□ -1.27
XRN1-209ENST00000472625 HOXB1P14653 301 aaPredicted RBP7.12□□□□□ -1.27
XRN1-209ENST00000472625 CADPS2Q86UW7 1296 aa7.11□□□□□ -1.27
XRN1-209ENST00000472625 RIMBP2O15034 1052 aa7.1□□□□□ -1.27
XRN1-209ENST00000472625 ARSIQ5FYB1 569 aa7.1□□□□□ -1.27
XRN1-209ENST00000472625 CECR2Q9BXF3 1484 aa7.1□□□□□ -1.27
XRN1-209ENST00000472625 ERBB3P21860 1342 aa7.09□□□□□ -1.27
XRN1-209ENST00000472625 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
XRN1-209ENST00000472625 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
XRN1-209ENST00000472625 SCRIBQ14160 1630 aa7.09□□□□□ -1.28
XRN1-209ENST00000472625 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
XRN1-209ENST00000472625 VARS2Q5ST30 1063 aaKnown RBP7.08□□□□□ -1.28
XRN1-209ENST00000472625 GPR153Q6NV75 609 aa7.08□□□□□ -1.28
XRN1-209ENST00000472625 TMC2Q8TDI7 906 aa7.08□□□□□ -1.28
XRN1-209ENST00000472625 EIF4G1Q04637 1599 aaKnown RBP7.08□□□□□ -1.28
XRN1-209ENST00000472625 CC2D2AQ9P2K1 1620 aa7.07□□□□□ -1.28
XRN1-209ENST00000472625 CRISPLD2Q9H0B8 497 aa7.06□□□□□ -1.28
XRN1-209ENST00000472625 NUDT7P0C024 238 aa7.04□□□□□ -1.28
XRN1-209ENST00000472625 ZSWIM6Q9HCJ5 1215 aa7.04□□□□□ -1.28
XRN1-209ENST00000472625 PAXIP1Q6ZW49 1069 aaPredicted RBP7.03□□□□□ -1.28
XRN1-209ENST00000472625 SPRYD3Q8NCJ5 442 aa7.02□□□□□ -1.29
XRN1-209ENST00000472625 GPHNQ9NQX3 736 aaPredicted RBP7.02□□□□□ -1.29
XRN1-209ENST00000472625 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
XRN1-209ENST00000472625 PCDHGA4Q9Y5G9 962 aa7.02□□□□□ -1.29
XRN1-209ENST00000472625 DSG2Q14126 1118 aa7.01□□□□□ -1.29
XRN1-209ENST00000472625 PLPP6Q8IY26 295 aa7.01□□□□□ -1.29
XRN1-209ENST00000472625 ZNF316A6NFI3 1004 aaPredicted RBP7□□□□□ -1.29
XRN1-209ENST00000472625 FOXK1P85037 733 aa7□□□□□ -1.29
XRN1-209ENST00000472625 MFSD10Q14728 455 aa6.99□□□□□ -1.29
XRN1-209ENST00000472625 CFAP44Q96MT7 982 aa6.99□□□□□ -1.29
XRN1-209ENST00000472625 LHX6Q9UPM6 363 aa6.99□□□□□ -1.29
XRN1-209ENST00000472625 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.98□□□□□ -1.29
XRN1-209ENST00000472625 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
XRN1-209ENST00000472625 ZNF687Q8N1G0 1237 aa6.97□□□□□ -1.29
XRN1-209ENST00000472625 TSHZ2Q9NRE2 1034 aa6.97□□□□□ -1.29
XRN1-209ENST00000472625 SLC34A2O95436 690 aa6.96□□□□□ -1.3
XRN1-209ENST00000472625 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
XRN1-209ENST00000472625 UPF1Q92900 1129 aaKnown RBP eCLIP6.96□□□□□ -1.3
XRN1-209ENST00000472625 AXIN2Q9Y2T1 843 aa6.95□□□□□ -1.3
XRN1-209ENST00000472625 PPP1R15BQ5SWA1 713 aa6.93□□□□□ -1.3
XRN1-209ENST00000472625 POTEEQ6S8J3 1075 aa6.93□□□□□ -1.3
XRN1-209ENST00000472625 ANKRD13DQ6ZTN6 518 aa6.92□□□□□ -1.3
XRN1-209ENST00000472625 PTCD2Q8WV60 388 aaKnown RBP6.92□□□□□ -1.3
XRN1-209ENST00000472625 EMILIN3Q9NT22 766 aa6.92□□□□□ -1.3
XRN1-209ENST00000472625 PDE4AP27815 886 aa6.91□□□□□ -1.3
XRN1-209ENST00000472625 CAMK2BQ13554 666 aa6.91□□□□□ -1.3
XRN1-209ENST00000472625 LARP6Q9BRS8 491 aaKnown RBP6.91□□□□□ -1.3
XRN1-209ENST00000472625 OXER1Q8TDS5 423 aa6.9□□□□□ -1.3
XRN1-209ENST00000472625 DDX27Q96GQ7 796 aaKnown RBP6.89□□□□□ -1.31
XRN1-209ENST00000472625 LSM11P83369 360 aaKnown RBP eCLIP6.88□□□□□ -1.31
XRN1-209ENST00000472625 PSEN2P49810 448 aa6.87□□□□□ -1.31
XRN1-209ENST00000472625 KDM2AQ9Y2K7 1162 aa6.87□□□□□ -1.31
XRN1-209ENST00000472625 CUX2O14529 1486 aa6.86□□□□□ -1.31
XRN1-209ENST00000472625 RNF166Q96A37 237 aaPredicted RBP6.86□□□□□ -1.31
XRN1-209ENST00000472625 MYT1LQ9UL68 1186 aa6.86□□□□□ -1.31
XRN1-209ENST00000472625 NCAPD3P42695 1498 aa6.85□□□□□ -1.31
XRN1-209ENST00000472625 TBC1D12O60347 775 aa6.85□□□□□ -1.31
XRN1-209ENST00000472625 DMRTA1Q5VZB9 504 aa6.85□□□□□ -1.31
XRN1-209ENST00000472625 SMARCA2P51531 1590 aa6.84□□□□□ -1.31
XRN1-209ENST00000472625 ERCC6Q03468 1493 aa6.84□□□□□ -1.31
XRN1-209ENST00000472625 HMGXB3Q12766 1538 aa6.83□□□□□ -1.32
XRN1-209ENST00000472625 PBX2P40425 430 aa6.83□□□□□ -1.32
XRN1-209ENST00000472625 PPP4R3BQ5MIZ7 849 aa6.83□□□□□ -1.32
XRN1-209ENST00000472625 ZNF454Q8N9F8 522 aa6.83□□□□□ -1.32
XRN1-209ENST00000472625 ARHGAP33O14559 1287 aa6.82□□□□□ -1.32
XRN1-209ENST00000472625 EVI5O60447 810 aa6.82□□□□□ -1.32
XRN1-209ENST00000472625 KCNK17Q96T54 332 aa6.82□□□□□ -1.32
XRN1-209ENST00000472625 ARIH1Q9Y4X5 557 aaPredicted RBP6.82□□□□□ -1.32
XRN1-209ENST00000472625 PSDA5PKW4 1024 aaPredicted RBP6.81□□□□□ -1.32
XRN1-209ENST00000472625 ANO8Q9HCE9 1232 aaPredicted RBP6.81□□□□□ -1.32
XRN1-209ENST00000472625 ATAD2BQ9ULI0 1458 aa6.8□□□□□ -1.32
XRN1-209ENST00000472625 MAP3K9P80192 1104 aa6.8□□□□□ -1.32
XRN1-209ENST00000472625 ADGRD1Q6QNK2 874 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms