RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
TSPAN1-205ENST00000472170 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
TSPAN1-205ENST00000472170 ARHGAP5Q13017 1502 aa13.21□□□□□ -0.29
TSPAN1-205ENST00000472170 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
TSPAN1-205ENST00000472170 POGZQ7Z3K3 1410 aa13.19□□□□□ -0.3
TSPAN1-205ENST00000472170 MAGI2Q86UL8 1455 aa13.18□□□□□ -0.3
TSPAN1-205ENST00000472170 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
TSPAN1-205ENST00000472170 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
TSPAN1-205ENST00000472170 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
TSPAN1-205ENST00000472170 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
TSPAN1-205ENST00000472170 ZNF518AQ6AHZ1 1483 aa13.14□□□□□ -0.31
TSPAN1-205ENST00000472170 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
TSPAN1-205ENST00000472170 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
TSPAN1-205ENST00000472170 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
TSPAN1-205ENST00000472170 ATP10AO60312 1499 aa13.11□□□□□ -0.31
TSPAN1-205ENST00000472170 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
TSPAN1-205ENST00000472170 MLECQ14165 292 aa13.11□□□□□ -0.31
TSPAN1-205ENST00000472170 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
TSPAN1-205ENST00000472170 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
TSPAN1-205ENST00000472170 ZMYM4Q5VZL5 1548 aa13.1□□□□□ -0.31
TSPAN1-205ENST00000472170 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
TSPAN1-205ENST00000472170 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
TSPAN1-205ENST00000472170 FRMPD1Q5SYB0 1578 aa13.1□□□□□ -0.31
TSPAN1-205ENST00000472170 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
TSPAN1-205ENST00000472170 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.31
TSPAN1-205ENST00000472170 ARHGEF40Q8TER5 1519 aa13.08□□□□□ -0.31
TSPAN1-205ENST00000472170 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.31
TSPAN1-205ENST00000472170 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
TSPAN1-205ENST00000472170 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
TSPAN1-205ENST00000472170 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
TSPAN1-205ENST00000472170 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
TSPAN1-205ENST00000472170 YEATS2Q9ULM3 1422 aa13.06□□□□□ -0.32
TSPAN1-205ENST00000472170 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
TSPAN1-205ENST00000472170 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
TSPAN1-205ENST00000472170 MLH3Q9UHC1 1453 aa13.05□□□□□ -0.32
TSPAN1-205ENST00000472170 TSPY4P0CV99 314 aa13.05□□□□□ -0.32
TSPAN1-205ENST00000472170 TSPY10P0CW01 314 aa13.05□□□□□ -0.32
TSPAN1-205ENST00000472170 BCORL1Q5H9F3 1711 aa13.05□□□□□ -0.32
TSPAN1-205ENST00000472170 ITSN2Q9NZM3 1697 aa13.04□□□□□ -0.32
TSPAN1-205ENST00000472170 ABCC1P33527 1531 aa13.03□□□□□ -0.32
TSPAN1-205ENST00000472170 FBXO41Q8TF61 875 aa13.03□□□□□ -0.32
TSPAN1-205ENST00000472170 TRAPPC8Q9Y2L5 1435 aa13.03□□□□□ -0.32
TSPAN1-205ENST00000472170 PTPRMP28827 1452 aa13.03□□□□□ -0.32
TSPAN1-205ENST00000472170 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
TSPAN1-205ENST00000472170 ADAMTSL3P82987 1691 aa13.02□□□□□ -0.32
TSPAN1-205ENST00000472170 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
TSPAN1-205ENST00000472170 KDM5CP41229 1560 aa13.02□□□□□ -0.33
TSPAN1-205ENST00000472170 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
TSPAN1-205ENST00000472170 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
TSPAN1-205ENST00000472170 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
TSPAN1-205ENST00000472170 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
TSPAN1-205ENST00000472170 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
TSPAN1-205ENST00000472170 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-205ENST00000472170 RIMS1Q86UR5 1692 aaKnown RBP12.98□□□□□ -0.33
TSPAN1-205ENST00000472170 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
TSPAN1-205ENST00000472170 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
TSPAN1-205ENST00000472170 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
TSPAN1-205ENST00000472170 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.34
TSPAN1-205ENST00000472170 DIP2CQ9Y2E4 1556 aa12.95□□□□□ -0.34
TSPAN1-205ENST00000472170 GGT6Q6P531 493 aa12.95□□□□□ -0.34
TSPAN1-205ENST00000472170 RTEL1-TNFRSF6BF6WH68 1400 aa12.95□□□□□ -0.34
TSPAN1-205ENST00000472170 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
TSPAN1-205ENST00000472170 KIDINS220Q9ULH0 1771 aa12.94□□□□□ -0.34
TSPAN1-205ENST00000472170 AGLP35573 1532 aa12.94□□□□□ -0.34
TSPAN1-205ENST00000472170 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
TSPAN1-205ENST00000472170 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
TSPAN1-205ENST00000472170 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
TSPAN1-205ENST00000472170 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
TSPAN1-205ENST00000472170 A2MP01023 1474 aa12.92□□□□□ -0.34
TSPAN1-205ENST00000472170 ABCA6Q8N139 1617 aa12.92□□□□□ -0.34
TSPAN1-205ENST00000472170 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
TSPAN1-205ENST00000472170 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
TSPAN1-205ENST00000472170 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
TSPAN1-205ENST00000472170 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
TSPAN1-205ENST00000472170 KIF3BO15066 747 aa12.91□□□□□ -0.34
TSPAN1-205ENST00000472170 MBD5Q9P267 1494 aa12.91□□□□□ -0.34
TSPAN1-205ENST00000472170 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
TSPAN1-205ENST00000472170 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
TSPAN1-205ENST00000472170 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
TSPAN1-205ENST00000472170 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
TSPAN1-205ENST00000472170 INO80Q9ULG1 1556 aaPredicted RBP12.87□□□□□ -0.35
TSPAN1-205ENST00000472170 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
TSPAN1-205ENST00000472170 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
TSPAN1-205ENST00000472170 ARHGEF5Q12774 1597 aa12.86□□□□□ -0.35
TSPAN1-205ENST00000472170 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
TSPAN1-205ENST00000472170 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
TSPAN1-205ENST00000472170 HSPA2P54652 639 aa12.85□□□□□ -0.35
TSPAN1-205ENST00000472170 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
TSPAN1-205ENST00000472170 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
TSPAN1-205ENST00000472170 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
TSPAN1-205ENST00000472170 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 NPATQ14207 1427 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 C3P01024 1663 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
TSPAN1-205ENST00000472170 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
TSPAN1-205ENST00000472170 MAST1Q9Y2H9 1570 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms